RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 IBTKQ9P2D0 1353 aaPredicted RBP21.69■■□□□ 1.06
NPAS3-202ENST00000356141 PIGBQ92521 554 aa21.69■■□□□ 1.06
NPAS3-202ENST00000356141 NEURL1BA8MQ27 555 aa21.68■■□□□ 1.06
NPAS3-202ENST00000356141 FRAT2O75474 233 aaPredicted RBP21.68■■□□□ 1.06
NPAS3-202ENST00000356141 LINS1Q8NG48 757 aa21.68■■□□□ 1.06
NPAS3-202ENST00000356141 EP400Q96L91 3159 aa21.68■■□□□ 1.06
NPAS3-202ENST00000356141 SCN11AQ9UI33 1791 aa21.68■■□□□ 1.06
NPAS3-202ENST00000356141 CCDC8Q9H0W5 538 aaPredicted RBP21.67■■□□□ 1.06
NPAS3-202ENST00000356141 DNAJC10Q8IXB1 793 aa21.67■■□□□ 1.06
NPAS3-202ENST00000356141 A0A087WZG4 1122 aa21.66■■□□□ 1.06
NPAS3-202ENST00000356141 NFKBIBQ15653 356 aa21.66■■□□□ 1.06
NPAS3-202ENST00000356141 NOL8Q76FK4 1167 aaKnown RBP21.66■■□□□ 1.06
NPAS3-202ENST00000356141 ROBO1Q9Y6N7 1651 aa21.66■■□□□ 1.06
NPAS3-202ENST00000356141 IL25Q9H293 177 aa21.65■■□□□ 1.06
NPAS3-202ENST00000356141 NDUFB9Q9Y6M9 179 aa21.65■■□□□ 1.06
NPAS3-202ENST00000356141 GCKRQ14397 625 aa21.65■■□□□ 1.06
NPAS3-202ENST00000356141 LRP10Q7Z4F1 713 aa21.65■■□□□ 1.06
NPAS3-202ENST00000356141 KIF2CQ99661 725 aa21.64■■□□□ 1.05
NPAS3-202ENST00000356141 METTL22Q9BUU2 404 aaPredicted RBP21.64■■□□□ 1.05
NPAS3-202ENST00000356141 TLR7Q9NYK1 1049 aaKnown RBP21.64■■□□□ 1.05
NPAS3-202ENST00000356141 SIPA1L3O60292 1781 aaPredicted RBP21.64■■□□□ 1.05
NPAS3-202ENST00000356141 KCNQ4P56696 695 aa21.64■■□□□ 1.05
NPAS3-202ENST00000356141 POLA2Q14181 598 aa21.64■■□□□ 1.05
NPAS3-202ENST00000356141 PRIM1P49642 420 aaKnown RBP21.63■■□□□ 1.05
NPAS3-202ENST00000356141 FAM182BQ5T319 152 aa21.63■■□□□ 1.05
NPAS3-202ENST00000356141 SRCAPQ6ZRS2 3230 aa21.63■■□□□ 1.05
NPAS3-202ENST00000356141 FAM177BA6PVY3 158 aa21.62■■□□□ 1.05
NPAS3-202ENST00000356141 UBAP1LF5GYI3 381 aa21.62■■□□□ 1.05
NPAS3-202ENST00000356141 HSCBQ8IWL3 235 aa21.62■■□□□ 1.05
NPAS3-202ENST00000356141 CACNA1FO60840 1977 aa21.62■■□□□ 1.05
NPAS3-202ENST00000356141 AACSQ86V21 672 aa21.62■■□□□ 1.05
NPAS3-202ENST00000356141 EXOC5O00471 708 aa21.61■■□□□ 1.05
NPAS3-202ENST00000356141 ALDH1L1O75891 902 aa21.61■■□□□ 1.05
NPAS3-202ENST00000356141 GPTP24298 496 aa21.61■■□□□ 1.05
NPAS3-202ENST00000356141 SYNE4Q8N205 404 aa21.61■■□□□ 1.05
NPAS3-202ENST00000356141 CHMP4AQ9BY43 222 aa21.61■■□□□ 1.05
NPAS3-202ENST00000356141 ANO2Q9NQ90 1003 aa21.61■■□□□ 1.05
NPAS3-202ENST00000356141 C8orf37Q96NL8 207 aa21.61■■□□□ 1.05
NPAS3-202ENST00000356141 ERVV-2B6SEH9 535 aa21.61■■□□□ 1.05
NPAS3-202ENST00000356141 KIF1BPQ96EK5 621 aa21.61■■□□□ 1.05
NPAS3-202ENST00000356141 PXDNLA1KZ92 1463 aa21.6■■□□□ 1.05
NPAS3-202ENST00000356141 HSP90AA1P07900 732 aaKnown RBP21.6■■□□□ 1.05
NPAS3-202ENST00000356141 DTNBO60941 627 aa21.6■■□□□ 1.05
NPAS3-202ENST00000356141 ATG3Q9NT62 314 aa21.6■■□□□ 1.05
NPAS3-202ENST00000356141 ABCA3Q99758 1704 aa21.59■■□□□ 1.05
NPAS3-202ENST00000356141 CASC1Q6TDU7 716 aa21.59■■□□□ 1.05
NPAS3-202ENST00000356141 SMIM5Q71RC9 77 aa21.59■■□□□ 1.05
NPAS3-202ENST00000356141 EDC3Q96F86 508 aaKnown RBP21.59■■□□□ 1.05
NPAS3-202ENST00000356141 ZNF594Q96JF6 807 aaPredicted RBP21.59■■□□□ 1.05
NPAS3-202ENST00000356141 SALL3Q9BXA9 1300 aa21.58■■□□□ 1.05
NPAS3-202ENST00000356141 SASH1O94885 1247 aa21.58■■□□□ 1.05
NPAS3-202ENST00000356141 G3BP1Q13283 466 aaKnown RBP eCLIP21.58■■□□□ 1.05
NPAS3-202ENST00000356141 IFIT2P09913 472 aaKnown RBP21.58■■□□□ 1.04
NPAS3-202ENST00000356141 RBM25P49756 843 aaKnown RBP21.58■■□□□ 1.04
NPAS3-202ENST00000356141 USP26Q9BXU7 913 aa21.58■■□□□ 1.04
NPAS3-202ENST00000356141 LMBR1LQ6UX01 489 aa21.57■■□□□ 1.04
NPAS3-202ENST00000356141 SLC4A9Q96Q91 983 aa21.57■■□□□ 1.04
NPAS3-202ENST00000356141 CWC27Q6UX04 472 aaKnown RBP21.57■■□□□ 1.04
NPAS3-202ENST00000356141 CLASRPQ8N2M8 674 aaKnown RBP21.57■■□□□ 1.04
NPAS3-202ENST00000356141 EAF2Q96CJ1 260 aaPredicted RBP21.56■■□□□ 1.04
NPAS3-202ENST00000356141 NHSL1Q5SYE7 1610 aa21.56■■□□□ 1.04
NPAS3-202ENST00000356141 BOLA2Q9H3K6 86 aa21.56■■□□□ 1.04
NPAS3-202ENST00000356141 TBC1D2BQ9UPU7 963 aa21.56■■□□□ 1.04
NPAS3-202ENST00000356141 PKD1L3Q7Z443 1732 aa21.56■■□□□ 1.04
NPAS3-202ENST00000356141 CHGBP05060 677 aa21.56■■□□□ 1.04
NPAS3-202ENST00000356141 FAM98CQ17RN3 349 aaKnown RBP21.55■■□□□ 1.04
NPAS3-202ENST00000356141 PLBD2Q8NHP8 589 aa21.55■■□□□ 1.04
NPAS3-202ENST00000356141 PI4K2BQ8TCG2 481 aa21.55■■□□□ 1.04
NPAS3-202ENST00000356141 FAM89AQ96GI7 184 aa21.55■■□□□ 1.04
NPAS3-202ENST00000356141 LARP6Q9BRS8 491 aaKnown RBP21.55■■□□□ 1.04
NPAS3-202ENST00000356141 BCL11BQ9C0K0 894 aaPredicted RBP21.55■■□□□ 1.04
NPAS3-202ENST00000356141 PALD1Q9ULE6 856 aa21.55■■□□□ 1.04
NPAS3-202ENST00000356141 ERC2O15083 957 aa21.54■■□□□ 1.04
NPAS3-202ENST00000356141 KCNQ2O43526 872 aa21.54■■□□□ 1.04
NPAS3-202ENST00000356141 CHMLP26374 656 aa21.54■■□□□ 1.04
NPAS3-202ENST00000356141 NKX1-1Q15270 411 aaPredicted RBP21.54■■□□□ 1.04
NPAS3-202ENST00000356141 ADAMTS7Q9UKP4 1686 aa21.53■■□□□ 1.04
NPAS3-202ENST00000356141 RAB11FIP3O75154 756 aa21.53■■□□□ 1.04
NPAS3-202ENST00000356141 DDB1Q16531 1140 aa21.53■■□□□ 1.04
NPAS3-202ENST00000356141 HLFQ16534 295 aa21.53■■□□□ 1.04
NPAS3-202ENST00000356141 ZBTB1Q9Y2K1 713 aa21.53■■□□□ 1.04
NPAS3-202ENST00000356141 TFCP2Q12800 502 aa21.52■■□□□ 1.04
NPAS3-202ENST00000356141 ESYT1Q9BSJ8 1104 aa21.52■■□□□ 1.04
NPAS3-202ENST00000356141 OSBPL3Q9H4L5 887 aa21.52■■□□□ 1.04
NPAS3-202ENST00000356141 NGLY1Q96IV0 654 aa21.52■■□□□ 1.04
NPAS3-202ENST00000356141 UPF3BQ9BZI7 483 aaKnown RBP21.52■■□□□ 1.04
NPAS3-202ENST00000356141 PARP4Q9UKK3 1724 aaKnown RBP21.51■■□□□ 1.03
NPAS3-202ENST00000356141 PTF1AQ7RTS3 328 aa21.51■■□□□ 1.03
NPAS3-202ENST00000356141 MRC1P22897 1456 aa21.51■■□□□ 1.03
NPAS3-202ENST00000356141 ANTXR1Q9H6X2 564 aa21.5■■□□□ 1.03
NPAS3-202ENST00000356141 TOM1O60784 492 aa21.5■■□□□ 1.03
NPAS3-202ENST00000356141 NEUROD6Q96NK8 337 aa21.5■■□□□ 1.03
NPAS3-202ENST00000356141 CWC25Q9NXE8 425 aaPredicted RBP21.5■■□□□ 1.03
NPAS3-202ENST00000356141 FOXD4L5Q5VV16 416 aaPredicted RBP21.49■■□□□ 1.03
NPAS3-202ENST00000356141 MARCH10Q8NA82 808 aaPredicted RBP21.49■■□□□ 1.03
NPAS3-202ENST00000356141 FOXD4L4Q8WXT5 416 aaPredicted RBP21.49■■□□□ 1.03
NPAS3-202ENST00000356141 PTPN12Q05209 780 aaKnown RBP21.48■■□□□ 1.03
NPAS3-202ENST00000356141 SLFNL1Q499Z3 407 aa21.48■■□□□ 1.03
NPAS3-202ENST00000356141 STAP2Q9UGK3 403 aa21.48■■□□□ 1.03
NPAS3-202ENST00000356141 KCPQ6ZWJ8 1503 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms