RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 PDRG1Q9NUG6 133 aa9.03□□□□□ -0.96
BRCA1-201ENST00000352993 CEBPZQ03701 1054 aaKnown RBP9.02□□□□□ -0.96
BRCA1-201ENST00000352993 CCDC144BQ3MJ40 725 aa9.02□□□□□ -0.96
BRCA1-201ENST00000352993 TAF7LQ5H9L4 462 aa9.02□□□□□ -0.96
BRCA1-201ENST00000352993 TTC6Q86TZ1 520 aa9.02□□□□□ -0.96
BRCA1-201ENST00000352993 HOMER1Q86YM7 354 aa9.02□□□□□ -0.96
BRCA1-201ENST00000352993 CCDC144CPQ8IYA2 1237 aa9.02□□□□□ -0.96
BRCA1-201ENST00000352993 ERO1AQ96HE7 468 aa9.02□□□□□ -0.96
BRCA1-201ENST00000352993 PRAM1Q96QH2 718 aa9.02□□□□□ -0.96
BRCA1-201ENST00000352993 SNX14Q9Y5W7 946 aa9.02□□□□□ -0.96
BRCA1-201ENST00000352993 CCDC171Q6TFL3 1326 aa9.02□□□□□ -0.97
BRCA1-201ENST00000352993 LARGE1O95461 756 aa9.02□□□□□ -0.97
BRCA1-201ENST00000352993 HSPA4P34932 840 aa9.02□□□□□ -0.97
BRCA1-201ENST00000352993 IRX3P78415 501 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-201ENST00000352993 ERCC6LQ2NKX8 1250 aa9.02□□□□□ -0.97
BRCA1-201ENST00000352993 NEK11Q8NG66 645 aa9.02□□□□□ -0.97
BRCA1-201ENST00000352993 TMX1Q9H3N1 280 aa9.02□□□□□ -0.97
BRCA1-201ENST00000352993 OSBPL3Q9H4L5 887 aa9.02□□□□□ -0.97
BRCA1-201ENST00000352993 MTMR6Q9Y217 621 aa9.02□□□□□ -0.97
BRCA1-201ENST00000352993 TET3O43151 1660 aa9.02□□□□□ -0.97
BRCA1-201ENST00000352993 MYOM2P54296 1465 aa9.02□□□□□ -0.97
BRCA1-201ENST00000352993 ATP10DQ9P241 1426 aa9.02□□□□□ -0.97
BRCA1-201ENST00000352993 RAD50Q92878 1312 aa9.02□□□□□ -0.97
BRCA1-201ENST00000352993 VGFO15240 615 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-201ENST00000352993 CAPN2P17655 700 aa9.02□□□□□ -0.97
BRCA1-201ENST00000352993 RASEFQ8IZ41 740 aa9.02□□□□□ -0.97
BRCA1-201ENST00000352993 IL25Q9H293 177 aa9.02□□□□□ -0.97
BRCA1-201ENST00000352993 USP16Q9Y5T5 823 aa9.02□□□□□ -0.97
BRCA1-201ENST00000352993 QRICH2Q9H0J4 1663 aa9.02□□□□□ -0.97
BRCA1-201ENST00000352993 ZNF853P0CG23 659 aa9.01□□□□□ -0.97
BRCA1-201ENST00000352993 RBM6P78332 1123 aaKnown RBP9.01□□□□□ -0.97
BRCA1-201ENST00000352993 OS9Q13438 667 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-201ENST00000352993 RRS1Q15050 365 aaKnown RBP9.01□□□□□ -0.97
BRCA1-201ENST00000352993 KIAA1210Q9ULL0 1709 aa9.01□□□□□ -0.97
BRCA1-201ENST00000352993 CCDC69A6NI79 296 aa9.01□□□□□ -0.97
BRCA1-201ENST00000352993 SOX12O15370 315 aa9.01□□□□□ -0.97
BRCA1-201ENST00000352993 G2E3Q7L622 706 aa9.01□□□□□ -0.97
BRCA1-201ENST00000352993 CERKQ8TCT0 537 aa9.01□□□□□ -0.97
BRCA1-201ENST00000352993 CHD2O14647 1828 aaKnown RBP9.01□□□□□ -0.97
BRCA1-201ENST00000352993 STK3Q13188 491 aa9.01□□□□□ -0.97
BRCA1-201ENST00000352993 PRPF40BQ6NWY9 871 aaKnown RBP9.01□□□□□ -0.97
BRCA1-201ENST00000352993 LRRC8AQ8IWT6 810 aa9.01□□□□□ -0.97
BRCA1-201ENST00000352993 STK31Q9BXU1 1019 aa9.01□□□□□ -0.97
BRCA1-201ENST00000352993 TSPYL1Q9H0U9 437 aa9.01□□□□□ -0.97
BRCA1-201ENST00000352993 MED1Q15648 1581 aaPredicted RBP9□□□□□ -0.97
BRCA1-201ENST00000352993 PNMA6EA0A0J9YXQ4 647 aa9□□□□□ -0.97
BRCA1-201ENST00000352993 SURF6O75683 361 aaKnown RBP9□□□□□ -0.97
BRCA1-201ENST00000352993 C10orf67Q8IYJ2 551 aa9□□□□□ -0.97
BRCA1-201ENST00000352993 CYP46A1Q9Y6A2 500 aa9□□□□□ -0.97
BRCA1-201ENST00000352993 CCT4P50991 539 aaKnown RBP9□□□□□ -0.97
BRCA1-201ENST00000352993 FOSBP53539 338 aa9□□□□□ -0.97
BRCA1-201ENST00000352993 ARHGAP29Q52LW3 1261 aa9□□□□□ -0.97
BRCA1-201ENST00000352993 TMCO3Q6UWJ1 677 aa9□□□□□ -0.97
BRCA1-201ENST00000352993 CDK19Q9BWU1 502 aa9□□□□□ -0.97
BRCA1-201ENST00000352993 ARGLU1Q9NWB6 273 aaPredicted RBP9□□□□□ -0.97
BRCA1-201ENST00000352993 KIF24Q5T7B8 1368 aa9□□□□□ -0.97
BRCA1-201ENST00000352993 LRRC7Q96NW7 1537 aa9□□□□□ -0.97
BRCA1-201ENST00000352993 SNW1Q13573 536 aaKnown RBP9□□□□□ -0.97
BRCA1-201ENST00000352993 GNL2Q13823 731 aaKnown RBP9□□□□□ -0.97
BRCA1-201ENST00000352993 ZRSR1Q15695 479 aaKnown RBP9□□□□□ -0.97
BRCA1-201ENST00000352993 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9□□□□□ -0.97
BRCA1-201ENST00000352993 MNS1Q8NEH6 495 aa9□□□□□ -0.97
BRCA1-201ENST00000352993 TCEANC2Q96MN5 208 aa9□□□□□ -0.97
BRCA1-201ENST00000352993 STAG3Q9UJ98 1225 aa9□□□□□ -0.97
BRCA1-201ENST00000352993 PTPRCP08575 1304 aa8.99□□□□□ -0.97
BRCA1-201ENST00000352993 SULT6B1Q6IMI4 303 aa8.99□□□□□ -0.97
BRCA1-201ENST00000352993 SYT10Q6XYQ8 523 aa8.99□□□□□ -0.97
BRCA1-201ENST00000352993 KRBA2Q6ZNG9 492 aa8.99□□□□□ -0.97
BRCA1-201ENST00000352993 CDC37L1Q7L3B6 337 aa8.99□□□□□ -0.97
BRCA1-201ENST00000352993 UBXN4Q92575 508 aa8.99□□□□□ -0.97
BRCA1-201ENST00000352993 DDX19AQ9NUU7 478 aaKnown RBP8.99□□□□□ -0.97
BRCA1-201ENST00000352993 RSPH14Q9UHP6 348 aa8.99□□□□□ -0.97
BRCA1-201ENST00000352993 KIF1BO60333 1816 aa8.99□□□□□ -0.97
BRCA1-201ENST00000352993 FAM135BQ49AJ0 1406 aa8.99□□□□□ -0.97
BRCA1-201ENST00000352993 TPM4P67936 248 aa8.99□□□□□ -0.97
BRCA1-201ENST00000352993 RAD51AP2Q09MP3 1159 aa8.99□□□□□ -0.97
BRCA1-201ENST00000352993 GPS2Q13227 327 aa8.99□□□□□ -0.97
BRCA1-201ENST00000352993 PLA2G4DQ86XP0 818 aa8.99□□□□□ -0.97
BRCA1-201ENST00000352993 CNTROBQ8N137 903 aa8.99□□□□□ -0.97
BRCA1-201ENST00000352993 LRRFIP2Q9Y608 721 aaKnown RBP8.99□□□□□ -0.97
BRCA1-201ENST00000352993 RIMS2Q9UQ26 1411 aa8.99□□□□□ -0.97
BRCA1-201ENST00000352993 A0A087WWV3 80 aa8.99□□□□□ -0.97
BRCA1-201ENST00000352993 NRDCO43847 1150 aa8.99□□□□□ -0.97
BRCA1-201ENST00000352993 ZRANB1Q9UGI0 708 aa8.99□□□□□ -0.97
BRCA1-201ENST00000352993 NR1I2O75469 434 aa8.98□□□□□ -0.97
BRCA1-201ENST00000352993 GNAI3P08754 354 aa8.98□□□□□ -0.97
BRCA1-201ENST00000352993 ZKSCAN1P17029 563 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-201ENST00000352993 RNF20Q5VTR2 975 aa8.98□□□□□ -0.97
BRCA1-201ENST00000352993 FMNL2Q96PY5 1086 aa8.98□□□□□ -0.97
BRCA1-201ENST00000352993 PUS7Q96PZ0 661 aaKnown RBP8.98□□□□□ -0.97
BRCA1-201ENST00000352993 SCAND2PQ9GZW5 306 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-201ENST00000352993 TSPYL4Q9UJ04 414 aa8.98□□□□□ -0.97
BRCA1-201ENST00000352993 COL3A1P02461 1466 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-201ENST00000352993 H3BQV1 296 aa8.98□□□□□ -0.97
BRCA1-201ENST00000352993 CYP2C19P33261 490 aa8.98□□□□□ -0.97
BRCA1-201ENST00000352993 IFFO2Q5TF58 517 aa8.98□□□□□ -0.97
BRCA1-201ENST00000352993 FAM177A1Q8N128 213 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-201ENST00000352993 ZSCAN31Q96LW9 406 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-201ENST00000352993 FEZ2Q9UHY8 353 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-201ENST00000352993 KNDC1Q76NI1 1749 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms