RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 NBPF7P0C2Y1 421 aaPredicted RBP23.27■■□□□ 1.32
PTN-201ENST00000348225 ZBTB47Q9UFB7 747 aaPredicted RBP23.27■■□□□ 1.32
PTN-201ENST00000348225 NEURL1BA8MQ27 555 aa23.26■■□□□ 1.31
PTN-201ENST00000348225 GRM8O00222 908 aa23.26■■□□□ 1.31
PTN-201ENST00000348225 IGKV5-2P06315 115 aa23.26■■□□□ 1.31
PTN-201ENST00000348225 CYP19A1P11511 503 aaPredicted RBP23.26■■□□□ 1.31
PTN-201ENST00000348225 SLC4A9Q96Q91 983 aa23.26■■□□□ 1.31
PTN-201ENST00000348225 UTYO14607 1347 aa23.26■■□□□ 1.31
PTN-201ENST00000348225 PALLDQ8WX93 1383 aa23.26■■□□□ 1.31
PTN-201ENST00000348225 NHSQ6T4R5 1651 aa23.25■■□□□ 1.31
PTN-201ENST00000348225 PDE4AP27815 886 aa23.25■■□□□ 1.31
PTN-201ENST00000348225 TTLL7Q6ZT98 887 aa23.25■■□□□ 1.31
PTN-201ENST00000348225 LNPKQ9C0E8 428 aa23.25■■□□□ 1.31
PTN-201ENST00000348225 QTRT2Q9H974 415 aaKnown RBP23.25■■□□□ 1.31
PTN-201ENST00000348225 ZNF831Q5JPB2 1677 aa23.24■■□□□ 1.31
PTN-201ENST00000348225 LOC102724428A0A0B4J2F2 783 aa23.23■■□□□ 1.31
PTN-201ENST00000348225 SIK1P57059 783 aa23.23■■□□□ 1.31
PTN-201ENST00000348225 GCKRQ14397 625 aa23.23■■□□□ 1.31
PTN-201ENST00000348225 KIF6Q6ZMV9 814 aa23.23■■□□□ 1.31
PTN-201ENST00000348225 KCNQ2O43526 872 aa23.22■■□□□ 1.31
PTN-201ENST00000348225 FAM161AQ3B820 660 aa23.22■■□□□ 1.31
PTN-201ENST00000348225 RBM19Q9Y4C8 960 aaKnown RBP23.22■■□□□ 1.31
PTN-201ENST00000348225 PNMA6EA0A0J9YXQ4 647 aa23.22■■□□□ 1.31
PTN-201ENST00000348225 ATP6V1AP38606 617 aa23.22■■□□□ 1.31
PTN-201ENST00000348225 SEPT12Q8IYM1 358 aa23.22■■□□□ 1.31
PTN-201ENST00000348225 SSH3Q8TE77 659 aa23.22■■□□□ 1.31
PTN-201ENST00000348225 BACH2Q9BYV9 841 aa23.22■■□□□ 1.31
PTN-201ENST00000348225 ZNF330Q9Y3S2 320 aaPredicted RBP23.22■■□□□ 1.31
PTN-201ENST00000348225 ZBTB3Q9H5J0 574 aa23.21■■□□□ 1.31
PTN-201ENST00000348225 PPP1R42Q7Z4L9 355 aa23.2■■□□□ 1.3
PTN-201ENST00000348225 NPM2Q86SE8 214 aaKnown RBP23.2■■□□□ 1.3
PTN-201ENST00000348225 IL6STP40189 918 aaPredicted RBP23.19■■□□□ 1.3
PTN-201ENST00000348225 MTX1Q13505 466 aa23.19■■□□□ 1.3
PTN-201ENST00000348225 ZBTB1Q9Y2K1 713 aa23.19■■□□□ 1.3
PTN-201ENST00000348225 RREB1Q92766 1687 aa23.19■■□□□ 1.3
PTN-201ENST00000348225 BTAF1O14981 1849 aa23.19■■□□□ 1.3
PTN-201ENST00000348225 SRGAP3O43295 1099 aa23.19■■□□□ 1.3
PTN-201ENST00000348225 POLA2Q14181 598 aa23.19■■□□□ 1.3
PTN-201ENST00000348225 ATP5J2-PTCD1G3V325 749 aa23.18■■□□□ 1.3
PTN-201ENST00000348225 CCDC87Q9NVE4 849 aa23.18■■□□□ 1.3
PTN-201ENST00000348225 MAP3K15Q6ZN16 1313 aa23.17■■□□□ 1.3
PTN-201ENST00000348225 ZNF772Q68DY9 489 aaPredicted RBP23.17■■□□□ 1.3
PTN-201ENST00000348225 SUCLG2Q96I99 432 aa23.17■■□□□ 1.3
PTN-201ENST00000348225 CWC25Q9NXE8 425 aaPredicted RBP23.17■■□□□ 1.3
PTN-201ENST00000348225 COL5A3P25940 1745 aaPredicted RBP23.17■■□□□ 1.3
PTN-201ENST00000348225 COL15A1P39059 1388 aa23.17■■□□□ 1.3
PTN-201ENST00000348225 CCDC191Q8NCU4 936 aa23.16■■□□□ 1.3
PTN-201ENST00000348225 SBF2Q86WG5 1849 aa23.16■■□□□ 1.3
PTN-201ENST00000348225 EXOC6BQ9Y2D4 811 aa23.15■■□□□ 1.3
PTN-201ENST00000348225 A0A087WZG4 1122 aa23.15■■□□□ 1.3
PTN-201ENST00000348225 CRKLP46109 303 aaKnown RBP23.15■■□□□ 1.3
PTN-201ENST00000348225 ITPK1Q13572 414 aa23.15■■□□□ 1.3
PTN-201ENST00000348225 C8orf34Q49A92 452 aa23.15■■□□□ 1.3
PTN-201ENST00000348225 HSP90AB3PQ58FF7 597 aa23.15■■□□□ 1.3
PTN-201ENST00000348225 APBB1O00213 710 aa23.14■■□□□ 1.29
PTN-201ENST00000348225 RAB11FIP3O75154 756 aa23.14■■□□□ 1.29
PTN-201ENST00000348225 TCIRG1Q13488 830 aa23.14■■□□□ 1.29
PTN-201ENST00000348225 HSP90AB4PQ58FF6 505 aa23.14■■□□□ 1.29
PTN-201ENST00000348225 ARXQ96QS3 562 aa23.14■■□□□ 1.29
PTN-201ENST00000348225 LRRCC1Q9C099 1032 aa23.14■■□□□ 1.29
PTN-201ENST00000348225 BICC1Q9H694 974 aaKnown RBP23.14■■□□□ 1.29
PTN-201ENST00000348225 INTS5Q6P9B9 1019 aaKnown RBP23.13■■□□□ 1.29
PTN-201ENST00000348225 ISCA1Q9BUE6 129 aa23.13■■□□□ 1.29
PTN-201ENST00000348225 ANKRD36CQ5JPF3 1778 aa23.12■■□□□ 1.29
PTN-201ENST00000348225 TRIM28Q13263 835 aaKnown RBP23.12■■□□□ 1.29
PTN-201ENST00000348225 FAM182BQ5T319 152 aa23.12■■□□□ 1.29
PTN-201ENST00000348225 GIGYF2Q6Y7W6 1299 aaKnown RBP23.12■■□□□ 1.29
PTN-201ENST00000348225 UBE3BQ7Z3V4 1068 aa23.12■■□□□ 1.29
PTN-201ENST00000348225 KAZALD1Q96I82 304 aa23.12■■□□□ 1.29
PTN-201ENST00000348225 ERVV-1B6SEH8 477 aa23.11■■□□□ 1.29
PTN-201ENST00000348225 SURF6O75683 361 aaKnown RBP23.11■■□□□ 1.29
PTN-201ENST00000348225 EIF5P55010 431 aaKnown RBP23.11■■□□□ 1.29
PTN-201ENST00000348225 DZIP3Q86Y13 1208 aaKnown RBP23.11■■□□□ 1.29
PTN-201ENST00000348225 H7C1W4 665 aa23.11■■□□□ 1.29
PTN-201ENST00000348225 SMARCA5O60264 1052 aaPredicted RBP23.1■■□□□ 1.29
PTN-201ENST00000348225 RBM6P78332 1123 aaKnown RBP23.1■■□□□ 1.29
PTN-201ENST00000348225 BRWD3Q6RI45 1802 aa23.09■■□□□ 1.29
PTN-201ENST00000348225 CASP7P55210 303 aa23.09■■□□□ 1.29
PTN-201ENST00000348225 NOP58Q9Y2X3 529 aaKnown RBP23.09■■□□□ 1.29
PTN-201ENST00000348225 MYH14Q7Z406 1995 aaKnown RBP23.09■■□□□ 1.29
PTN-201ENST00000348225 LY75O60449 1722 aa23.09■■□□□ 1.29
PTN-201ENST00000348225 BMP2KLQ5H9B9 411 aa23.08■■□□□ 1.29
PTN-201ENST00000348225 PTF1AQ7RTS3 328 aa23.08■■□□□ 1.29
PTN-201ENST00000348225 KRT27Q7Z3Y8 459 aa23.08■■□□□ 1.29
PTN-201ENST00000348225 PLEKHM2Q8IWE5 1019 aa23.08■■□□□ 1.29
PTN-201ENST00000348225 NUP98P52948 1817 aa23.08■■□□□ 1.29
PTN-201ENST00000348225 CNTNAP4Q9C0A0 1308 aa23.08■■□□□ 1.29
PTN-201ENST00000348225 KIF1BPQ96EK5 621 aa23.08■■□□□ 1.28
PTN-201ENST00000348225 OS9Q13438 667 aaPredicted RBP23.07■■□□□ 1.28
PTN-201ENST00000348225 RABL6Q3YEC7 729 aaPredicted RBP23.07■■□□□ 1.28
PTN-201ENST00000348225 FAM196AQ6ZSG2 479 aa23.07■■□□□ 1.28
PTN-201ENST00000348225 ERC1Q8IUD2 1116 aa23.07■■□□□ 1.28
PTN-201ENST00000348225 BCL11BQ9C0K0 894 aaPredicted RBP23.07■■□□□ 1.28
PTN-201ENST00000348225 HLFQ16534 295 aa23.06■■□□□ 1.28
PTN-201ENST00000348225 LINC00116Q8NCU8 138 aa23.06■■□□□ 1.28
PTN-201ENST00000348225 TBC1D2BQ9UPU7 963 aa23.06■■□□□ 1.28
PTN-201ENST00000348225 EPHA10Q5JZY3 1008 aa23.05■■□□□ 1.28
PTN-201ENST00000348225 C16orf71Q8IYS4 520 aaPredicted RBP23.05■■□□□ 1.28
PTN-201ENST00000348225 JARID2Q92833 1246 aaPredicted RBP23.05■■□□□ 1.28
PTN-201ENST00000348225 BCL11AQ9H165 835 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms