RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 LRRC27Q9C0I9 530 aa26.7■■□□□ 1.86
NPAS3-201ENST00000346562 PTPN14Q15678 1187 aa26.7■■□□□ 1.86
NPAS3-201ENST00000346562 MYO1BO43795 1136 aa26.69■■□□□ 1.86
NPAS3-201ENST00000346562 BRPF3Q9ULD4 1205 aa26.69■■□□□ 1.86
NPAS3-201ENST00000346562 NME9Q86XW9 330 aa26.69■■□□□ 1.86
NPAS3-201ENST00000346562 TAOK3Q9H2K8 898 aa26.69■■□□□ 1.86
NPAS3-201ENST00000346562 TTC21BQ7Z4L5 1316 aa26.69■■□□□ 1.86
NPAS3-201ENST00000346562 ALS2CR12Q96Q35 445 aa26.68■■□□□ 1.86
NPAS3-201ENST00000346562 CWC25Q9NXE8 425 aaPredicted RBP26.68■■□□□ 1.86
NPAS3-201ENST00000346562 PAFAH1B1P43034 410 aa26.68■■□□□ 1.86
NPAS3-201ENST00000346562 TIAM1Q13009 1591 aa26.68■■□□□ 1.86
NPAS3-201ENST00000346562 CCDC82Q8N4S0 544 aa26.68■■□□□ 1.86
NPAS3-201ENST00000346562 KIF4BQ2VIQ3 1234 aa26.67■■□□□ 1.86
NPAS3-201ENST00000346562 PDCL2Q8N4E4 241 aa26.67■■□□□ 1.86
NPAS3-201ENST00000346562 LIMCH1Q9UPQ0 1083 aa26.67■■□□□ 1.86
NPAS3-201ENST00000346562 MTIF2P46199 727 aaKnown RBP26.67■■□□□ 1.86
NPAS3-201ENST00000346562 CCDC40Q4G0X9 1142 aa26.67■■□□□ 1.86
NPAS3-201ENST00000346562 GUCY1B3Q02153 619 aa26.66■■□□□ 1.86
NPAS3-201ENST00000346562 FERMT1Q9BQL6 677 aa26.66■■□□□ 1.86
NPAS3-201ENST00000346562 CD109Q6YHK3 1445 aa26.66■■□□□ 1.86
NPAS3-201ENST00000346562 SMC1AQ14683 1233 aaKnown RBP26.66■■□□□ 1.86
NPAS3-201ENST00000346562 IFNL2Q8IZJ0 200 aa26.66■■□□□ 1.86
NPAS3-201ENST00000346562 AMOTL2Q9Y2J4 779 aa26.66■■□□□ 1.86
NPAS3-201ENST00000346562 NKTRP30414 1462 aaKnown RBP26.66■■□□□ 1.86
NPAS3-201ENST00000346562 MACROD2A1Z1Q3 448 aa26.66■■□□□ 1.86
NPAS3-201ENST00000346562 GPTP24298 496 aa26.66■■□□□ 1.86
NPAS3-201ENST00000346562 COMMD10Q9Y6G5 202 aa26.66■■□□□ 1.86
NPAS3-201ENST00000346562 NF2P35240 595 aa26.65■■□□□ 1.86
NPAS3-201ENST00000346562 PRKCSHP14314 528 aaPredicted RBP26.65■■□□□ 1.86
NPAS3-201ENST00000346562 TMEM67Q5HYA8 995 aa26.65■■□□□ 1.86
NPAS3-201ENST00000346562 DMRT2Q9Y5R5 561 aa26.65■■□□□ 1.86
NPAS3-201ENST00000346562 ZBTB3Q9H5J0 574 aa26.65■■□□□ 1.86
NPAS3-201ENST00000346562 TOPBP1Q92547 1522 aa26.65■■□□□ 1.86
NPAS3-201ENST00000346562 TSPY2A6NKD2 308 aa26.64■■□□□ 1.86
NPAS3-201ENST00000346562 WASLO00401 505 aaPredicted RBP26.64■■□□□ 1.86
NPAS3-201ENST00000346562 NAIPQ13075 1403 aa26.64■■□□□ 1.86
NPAS3-201ENST00000346562 CLIP2Q9UDT6 1046 aa26.64■■□□□ 1.86
NPAS3-201ENST00000346562 MAP3K2Q9Y2U5 619 aa26.64■■□□□ 1.86
NPAS3-201ENST00000346562 PABPN1LA6NDY0 278 aaKnown RBP26.64■■□□□ 1.85
NPAS3-201ENST00000346562 RFC4P35249 363 aa26.64■■□□□ 1.85
NPAS3-201ENST00000346562 SYCP3Q8IZU3 236 aa26.64■■□□□ 1.85
NPAS3-201ENST00000346562 SSH1Q8WYL5 1049 aa26.63■■□□□ 1.85
NPAS3-201ENST00000346562 NAA15Q9BXJ9 866 aaKnown RBP26.63■■□□□ 1.85
NPAS3-201ENST00000346562 MFSD6Q6ZSS7 791 aa26.63■■□□□ 1.85
NPAS3-201ENST00000346562 IARSP41252 1262 aaKnown RBP26.63■■□□□ 1.85
NPAS3-201ENST00000346562 SAMM50Q9Y512 469 aa26.63■■□□□ 1.85
NPAS3-201ENST00000346562 KIF18AQ8NI77 898 aa26.63■■□□□ 1.85
NPAS3-201ENST00000346562 DHX37Q8IY37 1157 aaKnown RBP26.62■■□□□ 1.85
NPAS3-201ENST00000346562 RARSP54136 660 aaKnown RBP26.62■■□□□ 1.85
NPAS3-201ENST00000346562 CRNKL1Q9BZJ0 848 aaKnown RBP26.62■■□□□ 1.85
NPAS3-201ENST00000346562 PPP4R3BQ5MIZ7 849 aa26.62■■□□□ 1.85
NPAS3-201ENST00000346562 KANK3Q6NY19 840 aa26.62■■□□□ 1.85
NPAS3-201ENST00000346562 KRT28Q7Z3Y7 464 aa26.62■■□□□ 1.85
NPAS3-201ENST00000346562 ZNF622Q969S3 477 aaKnown RBP eCLIP26.62■■□□□ 1.85
NPAS3-201ENST00000346562 DDX19AQ9NUU7 478 aaKnown RBP26.62■■□□□ 1.85
NPAS3-201ENST00000346562 F6X3S4 739 aa26.62■■□□□ 1.85
NPAS3-201ENST00000346562 UQCRFS1P1P0C7P4 283 aa26.62■■□□□ 1.85
NPAS3-201ENST00000346562 LDHAL6AQ6ZMR3 332 aa26.61■■□□□ 1.85
NPAS3-201ENST00000346562 TCERG1LQ5VWI1 586 aa26.61■■□□□ 1.85
NPAS3-201ENST00000346562 FSIP1Q8NA03 581 aa26.61■■□□□ 1.85
NPAS3-201ENST00000346562 GOLIM4O00461 696 aa26.61■■□□□ 1.85
NPAS3-201ENST00000346562 GIGYF2Q6Y7W6 1299 aaKnown RBP26.61■■□□□ 1.85
NPAS3-201ENST00000346562 ECHDC1Q9NTX5 307 aa26.61■■□□□ 1.85
NPAS3-201ENST00000346562 FOXO3O43524 673 aa26.6■■□□□ 1.85
NPAS3-201ENST00000346562 CCT2P78371 535 aaKnown RBP26.6■■□□□ 1.85
NPAS3-201ENST00000346562 EMILIN1Q9Y6C2 1016 aa26.6■■□□□ 1.85
NPAS3-201ENST00000346562 KIF14Q15058 1648 aa26.6■■□□□ 1.85
NPAS3-201ENST00000346562 FLIIQ13045 1269 aa26.6■■□□□ 1.85
NPAS3-201ENST00000346562 NSD2O96028 1365 aa26.6■■□□□ 1.85
NPAS3-201ENST00000346562 PIK3R4Q99570 1358 aa26.6■■□□□ 1.85
NPAS3-201ENST00000346562 ADGRL1O94910 1474 aa26.59■■□□□ 1.85
NPAS3-201ENST00000346562 PRC1O43663 620 aa26.59■■□□□ 1.85
NPAS3-201ENST00000346562 GRIPAP1Q4V328 841 aa26.59■■□□□ 1.85
NPAS3-201ENST00000346562 NCOA7Q8NI08 942 aa26.59■■□□□ 1.85
NPAS3-201ENST00000346562 NESP48681 1621 aa26.59■■□□□ 1.85
NPAS3-201ENST00000346562 POTEB2H3BUK9 544 aa26.59■■□□□ 1.85
NPAS3-201ENST00000346562 NEMFO60524 1076 aa26.59■■□□□ 1.85
NPAS3-201ENST00000346562 SYNJ1O43426 1573 aa26.59■■□□□ 1.85
NPAS3-201ENST00000346562 TBCAO75347 108 aaKnown RBP26.59■■□□□ 1.85
NPAS3-201ENST00000346562 TRAF1Q13077 416 aa26.59■■□□□ 1.85
NPAS3-201ENST00000346562 CCDC152Q4G0S7 254 aa26.59■■□□□ 1.85
NPAS3-201ENST00000346562 VAT1LQ9HCJ6 419 aa26.59■■□□□ 1.85
NPAS3-201ENST00000346562 URI1O94763 535 aaPredicted RBP26.59■■□□□ 1.85
NPAS3-201ENST00000346562 METAP2P50579 478 aaKnown RBP eCLIP26.59■■□□□ 1.85
NPAS3-201ENST00000346562 STX1AQ16623 288 aa26.59■■□□□ 1.85
NPAS3-201ENST00000346562 BICD1Q96G01 975 aa26.59■■□□□ 1.85
NPAS3-201ENST00000346562 CAMSAP2Q08AD1 1489 aa26.59■■□□□ 1.85
NPAS3-201ENST00000346562 DNA2P51530 1060 aa26.58■■□□□ 1.85
NPAS3-201ENST00000346562 ERMNQ8TAM6 284 aa26.58■■□□□ 1.85
NPAS3-201ENST00000346562 MAGI1Q96QZ7 1491 aaPredicted RBP26.58■■□□□ 1.85
NPAS3-201ENST00000346562 USP16Q9Y5T5 823 aa26.58■■□□□ 1.85
NPAS3-201ENST00000346562 CCDC174Q6PII3 467 aa26.58■■□□□ 1.85
NPAS3-201ENST00000346562 TSNARE1Q96NA8 513 aa26.58■■□□□ 1.85
NPAS3-201ENST00000346562 HMG20BQ9P0W2 317 aa26.58■■□□□ 1.85
NPAS3-201ENST00000346562 ARHGEF11O15085 1522 aa26.58■■□□□ 1.85
NPAS3-201ENST00000346562 TNNT1P13805 278 aa26.57■■□□□ 1.84
NPAS3-201ENST00000346562 IDEP14735 1019 aa26.57■■□□□ 1.84
NPAS3-201ENST00000346562 GSDMDP57764 484 aa26.57■■□□□ 1.84
NPAS3-201ENST00000346562 TMCO5BA8MYB1 307 aa26.57■■□□□ 1.84
NPAS3-201ENST00000346562 CCDC172P0C7W6 258 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms