RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 KIF5CO60282 957 aa17.37■□□□□ 0.37
CUL3-202ENST00000344951 AKNAD1Q5T1N1 836 aa17.37■□□□□ 0.37
CUL3-202ENST00000344951 KRT32Q14532 448 aa17.36■□□□□ 0.37
CUL3-202ENST00000344951 FCHSD2O94868 740 aa17.36■□□□□ 0.37
CUL3-202ENST00000344951 KIF18AQ8NI77 898 aa17.36■□□□□ 0.37
CUL3-202ENST00000344951 SYNCQ9H7C4 482 aa17.36■□□□□ 0.37
CUL3-202ENST00000344951 OSCARQ8IYS5 282 aa17.36■□□□□ 0.37
CUL3-202ENST00000344951 ZSWIM4Q9H7M6 989 aa17.36■□□□□ 0.37
CUL3-202ENST00000344951 MTIF2P46199 727 aaKnown RBP17.36■□□□□ 0.37
CUL3-202ENST00000344951 FAM212AQ96EL1 285 aa17.36■□□□□ 0.37
CUL3-202ENST00000344951 CCDC8Q9H0W5 538 aaPredicted RBP17.36■□□□□ 0.37
CUL3-202ENST00000344951 IGHDP01880 384 aa17.35■□□□□ 0.37
CUL3-202ENST00000344951 TMEM110-MUSTN1A8MSY1 372 aa17.35■□□□□ 0.37
CUL3-202ENST00000344951 IDEP14735 1019 aa17.35■□□□□ 0.37
CUL3-202ENST00000344951 F8W031 263 aaPredicted RBP17.35■□□□□ 0.37
CUL3-202ENST00000344951 ZWINTO95229 277 aa17.35■□□□□ 0.37
CUL3-202ENST00000344951 STARD3NLO95772 234 aa17.35■□□□□ 0.37
CUL3-202ENST00000344951 TMCO4Q5TGY1 634 aa17.35■□□□□ 0.37
CUL3-202ENST00000344951 ADCY5O95622 1261 aa17.35■□□□□ 0.37
CUL3-202ENST00000344951 BMS1Q14692 1282 aaKnown RBP17.35■□□□□ 0.37
CUL3-202ENST00000344951 VPS36Q86VN1 386 aa17.35■□□□□ 0.37
CUL3-202ENST00000344951 PSMC4P43686 418 aa17.34■□□□□ 0.37
CUL3-202ENST00000344951 CCDC40Q4G0X9 1142 aa17.34■□□□□ 0.37
CUL3-202ENST00000344951 RNF216Q9NWF9 866 aaPredicted RBP17.34■□□□□ 0.37
CUL3-202ENST00000344951 JARID2Q92833 1246 aaPredicted RBP17.34■□□□□ 0.37
CUL3-202ENST00000344951 LRPPRCP42704 1394 aaKnown RBP17.34■□□□□ 0.37
CUL3-202ENST00000344951 TOP1P11387 765 aaKnown RBP17.34■□□□□ 0.37
CUL3-202ENST00000344951 TMOD3Q9NYL9 352 aa17.34■□□□□ 0.37
CUL3-202ENST00000344951 SH3BP5O60239 455 aa17.34■□□□□ 0.37
CUL3-202ENST00000344951 MXRA7P84157 204 aa17.34■□□□□ 0.37
CUL3-202ENST00000344951 ATP2B3Q16720 1220 aa17.34■□□□□ 0.37
CUL3-202ENST00000344951 TMEM266Q2M3C6 531 aa17.34■□□□□ 0.37
CUL3-202ENST00000344951 MCM10Q7L590 875 aa17.34■□□□□ 0.37
CUL3-202ENST00000344951 ANO10Q9NW15 660 aa17.34■□□□□ 0.37
CUL3-202ENST00000344951 SLC12A7Q9Y666 1083 aa17.34■□□□□ 0.37
CUL3-202ENST00000344951 KIF2AO00139 706 aaPredicted RBP17.33■□□□□ 0.37
CUL3-202ENST00000344951 IFIT1P09914 478 aaKnown RBP17.33■□□□□ 0.37
CUL3-202ENST00000344951 TIGD1Q96MW7 591 aa17.33■□□□□ 0.37
CUL3-202ENST00000344951 PLEKHH2Q8IVE3 1493 aa17.33■□□□□ 0.37
CUL3-202ENST00000344951 PRG4Q92954 1404 aaPredicted RBP17.33■□□□□ 0.37
CUL3-202ENST00000344951 RAB3IL1Q8TBN0 382 aa17.33■□□□□ 0.36
CUL3-202ENST00000344951 CCDC160A6NGH7 325 aa17.33■□□□□ 0.36
CUL3-202ENST00000344951 ZSCAN12O43309 604 aa17.33■□□□□ 0.36
CUL3-202ENST00000344951 SSRP1Q08945 709 aaKnown RBP17.33■□□□□ 0.36
CUL3-202ENST00000344951 SUPT6HQ7KZ85 1726 aaKnown RBP17.32■□□□□ 0.36
CUL3-202ENST00000344951 BAG4O95429 457 aaKnown RBP17.32■□□□□ 0.36
CUL3-202ENST00000344951 CTCFLQ8NI51 663 aaPredicted RBP17.32■□□□□ 0.36
CUL3-202ENST00000344951 HSP90AA4PQ58FG1 418 aa17.32■□□□□ 0.36
CUL3-202ENST00000344951 PROCA1Q8NCQ7 364 aaPredicted RBP17.32■□□□□ 0.36
CUL3-202ENST00000344951 PLS1Q14651 629 aa17.32■□□□□ 0.36
CUL3-202ENST00000344951 ZSCAN23Q3MJ62 389 aa17.32■□□□□ 0.36
CUL3-202ENST00000344951 FSD2A1L4K1 749 aa17.31■□□□□ 0.36
CUL3-202ENST00000344951 ANKRD18BA2A2Z9 1011 aa17.31■□□□□ 0.36
CUL3-202ENST00000344951 TBC1D9Q6ZT07 1266 aa17.31■□□□□ 0.36
CUL3-202ENST00000344951 ZNF287Q9HBT7 754 aa17.31■□□□□ 0.36
CUL3-202ENST00000344951 A0A1W2PRG0 241 aa17.31■□□□□ 0.36
CUL3-202ENST00000344951 CCDC175P0C221 793 aa17.31■□□□□ 0.36
CUL3-202ENST00000344951 SPATA24Q86W54 205 aa17.31■□□□□ 0.36
CUL3-202ENST00000344951 EFCAB5A4FU69 1503 aa17.31■□□□□ 0.36
CUL3-202ENST00000344951 CCDC194A0A1B0GVG4 234 aa17.31■□□□□ 0.36
CUL3-202ENST00000344951 TRMT112Q9UI30 125 aaKnown RBP17.31■□□□□ 0.36
CUL3-202ENST00000344951 DUSP27Q5VZP5 1158 aa17.31■□□□□ 0.36
CUL3-202ENST00000344951 CNNM3Q8NE01 707 aa17.31■□□□□ 0.36
CUL3-202ENST00000344951 RTEL1-TNFRSF6BF6WH68 1400 aa17.31■□□□□ 0.36
CUL3-202ENST00000344951 IFIT3O14879 490 aaKnown RBP17.31■□□□□ 0.36
CUL3-202ENST00000344951 NAIPQ13075 1403 aa17.31■□□□□ 0.36
CUL3-202ENST00000344951 SCAND2PQ9GZW5 306 aaPredicted RBP17.31■□□□□ 0.36
CUL3-202ENST00000344951 CCDC63Q8NA47 563 aa17.31■□□□□ 0.36
CUL3-202ENST00000344951 C8orf76Q96K31 380 aa17.31■□□□□ 0.36
CUL3-202ENST00000344951 ZNF652Q9Y2D9 606 aa17.3■□□□□ 0.36
CUL3-202ENST00000344951 GTF2F1P35269 517 aaKnown RBP eCLIP17.3■□□□□ 0.36
CUL3-202ENST00000344951 ALDH1L2Q3SY69 923 aa17.3■□□□□ 0.36
CUL3-202ENST00000344951 KIF1BPQ96EK5 621 aa17.3■□□□□ 0.36
CUL3-202ENST00000344951 PLEKHH1Q9ULM0 1364 aa17.3■□□□□ 0.36
CUL3-202ENST00000344951 GOLGA8AA7E2F4 631 aa17.3■□□□□ 0.36
CUL3-202ENST00000344951 GOLGA8BA8MQT2 603 aa17.3■□□□□ 0.36
CUL3-202ENST00000344951 HAND2P61296 217 aa17.3■□□□□ 0.36
CUL3-202ENST00000344951 TBC1D32Q96NH3 1257 aa17.3■□□□□ 0.36
CUL3-202ENST00000344951 ZNF830Q96NB3 372 aaPredicted RBP17.3■□□□□ 0.36
CUL3-202ENST00000344951 GIGYF2Q6Y7W6 1299 aaKnown RBP17.3■□□□□ 0.36
CUL3-202ENST00000344951 ZNF692Q9BU19 519 aaPredicted RBP17.3■□□□□ 0.36
CUL3-202ENST00000344951 NDC80O14777 642 aa17.29■□□□□ 0.36
CUL3-202ENST00000344951 GBP3Q9H0R5 595 aa17.29■□□□□ 0.36
CUL3-202ENST00000344951 IKBKGQ9Y6K9 419 aa17.29■□□□□ 0.36
CUL3-202ENST00000344951 TRIM27P14373 513 aa17.29■□□□□ 0.36
CUL3-202ENST00000344951 PAFAH1B1P43034 410 aa17.29■□□□□ 0.36
CUL3-202ENST00000344951 PDIA4P13667 645 aaKnown RBP17.29■□□□□ 0.36
CUL3-202ENST00000344951 RBM26Q5T8P6 1007 aaKnown RBP17.29■□□□□ 0.36
CUL3-202ENST00000344951 CTR9Q6PD62 1173 aa17.29■□□□□ 0.36
CUL3-202ENST00000344951 JADE2Q9NQC1 790 aa17.29■□□□□ 0.36
CUL3-202ENST00000344951 F6X3S4 739 aa17.28■□□□□ 0.36
CUL3-202ENST00000344951 GJB2P29033 226 aa17.28■□□□□ 0.36
CUL3-202ENST00000344951 EHMT1Q9H9B1 1298 aa17.28■□□□□ 0.36
CUL3-202ENST00000344951 SNRKQ9NRH2 765 aa17.28■□□□□ 0.36
CUL3-202ENST00000344951 ZNF213O14771 459 aa17.28■□□□□ 0.36
CUL3-202ENST00000344951 USO1O60763 962 aaKnown RBP17.28■□□□□ 0.36
CUL3-202ENST00000344951 CFAP58Q5T655 872 aa17.28■□□□□ 0.36
CUL3-202ENST00000344951 SH2B1Q9NRF2 756 aaPredicted RBP17.28■□□□□ 0.36
CUL3-202ENST00000344951 LIMCH1Q9UPQ0 1083 aa17.28■□□□□ 0.36
CUL3-202ENST00000344951 POLA1P09884 1462 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms