RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 CYP19A1P11511 503 aaPredicted RBP27.49■■□□□ 1.99
CACNB1-201ENST00000344140 ATP8B2P98198 1209 aa27.49■■□□□ 1.99
CACNB1-201ENST00000344140 CWF19L2Q2TBE0 894 aaKnown RBP27.49■■□□□ 1.99
CACNB1-201ENST00000344140 FAM182BQ5T319 152 aa27.49■■□□□ 1.99
CACNB1-201ENST00000344140 IGKV5-2P06315 115 aa27.49■■□□□ 1.99
CACNB1-201ENST00000344140 NBPF7P0C2Y1 421 aaPredicted RBP27.49■■□□□ 1.99
CACNB1-201ENST00000344140 MYD88Q99836 296 aa27.49■■□□□ 1.99
CACNB1-201ENST00000344140 NEURL1BA8MQ27 555 aa27.48■■□□□ 1.99
CACNB1-201ENST00000344140 CHD1LQ86WJ1 897 aa27.48■■□□□ 1.99
CACNB1-201ENST00000344140 UTYO14607 1347 aa27.48■■□□□ 1.99
CACNB1-201ENST00000344140 KCNQ2O43526 872 aa27.47■■□□□ 1.99
CACNB1-201ENST00000344140 PALLDQ8WX93 1383 aa27.47■■□□□ 1.99
CACNB1-201ENST00000344140 GRM8O00222 908 aa27.47■■□□□ 1.99
CACNB1-201ENST00000344140 LOC102724428A0A0B4J2F2 783 aa27.46■■□□□ 1.99
CACNB1-201ENST00000344140 SIK1P57059 783 aa27.46■■□□□ 1.99
CACNB1-201ENST00000344140 ANKRD45Q5TZF3 282 aa27.46■■□□□ 1.99
CACNB1-201ENST00000344140 TTLL7Q6ZT98 887 aa27.46■■□□□ 1.99
CACNB1-201ENST00000344140 GCKRQ14397 625 aa27.44■■□□□ 1.98
CACNB1-201ENST00000344140 ARFGEF2Q9Y6D5 1785 aa27.44■■□□□ 1.98
CACNB1-201ENST00000344140 TJP1Q07157 1748 aa27.44■■□□□ 1.98
CACNB1-201ENST00000344140 ATP6V1AP38606 617 aa27.43■■□□□ 1.98
CACNB1-201ENST00000344140 FAM196AQ6ZSG2 479 aa27.43■■□□□ 1.98
CACNB1-201ENST00000344140 KIF6Q6ZMV9 814 aa27.42■■□□□ 1.98
CACNB1-201ENST00000344140 LNPKQ9C0E8 428 aa27.42■■□□□ 1.98
CACNB1-201ENST00000344140 CICQ96RK0 1608 aaPredicted RBP27.42■■□□□ 1.98
CACNB1-201ENST00000344140 ZBTB47Q9UFB7 747 aaPredicted RBP27.42■■□□□ 1.98
CACNB1-201ENST00000344140 PNMA6EA0A0J9YXQ4 647 aa27.41■■□□□ 1.98
CACNB1-201ENST00000344140 SSH3Q8TE77 659 aa27.41■■□□□ 1.98
CACNB1-201ENST00000344140 PDE4AP27815 886 aa27.4■■□□□ 1.98
CACNB1-201ENST00000344140 IL6STP40189 918 aaPredicted RBP27.4■■□□□ 1.98
CACNB1-201ENST00000344140 MTX1Q13505 466 aa27.4■■□□□ 1.98
CACNB1-201ENST00000344140 ZBTB3Q9H5J0 574 aa27.4■■□□□ 1.98
CACNB1-201ENST00000344140 ZBTB1Q9Y2K1 713 aa27.4■■□□□ 1.98
CACNB1-201ENST00000344140 ZNF330Q9Y3S2 320 aaPredicted RBP27.4■■□□□ 1.98
CACNB1-201ENST00000344140 NUP188Q5SRE5 1749 aa27.39■■□□□ 1.98
CACNB1-201ENST00000344140 PPP1R42Q7Z4L9 355 aa27.39■■□□□ 1.98
CACNB1-201ENST00000344140 NPM2Q86SE8 214 aaKnown RBP27.39■■□□□ 1.98
CACNB1-201ENST00000344140 POLA2Q14181 598 aa27.38■■□□□ 1.97
CACNB1-201ENST00000344140 NHSQ6T4R5 1651 aa27.38■■□□□ 1.97
CACNB1-201ENST00000344140 BACH2Q9BYV9 841 aa27.38■■□□□ 1.97
CACNB1-201ENST00000344140 CCDC87Q9NVE4 849 aa27.38■■□□□ 1.97
CACNB1-201ENST00000344140 ZNF831Q5JPB2 1677 aa27.38■■□□□ 1.97
CACNB1-201ENST00000344140 ATP5J2-PTCD1G3V325 749 aa27.37■■□□□ 1.97
CACNB1-201ENST00000344140 FAM161AQ3B820 660 aa27.37■■□□□ 1.97
CACNB1-201ENST00000344140 SBF2Q86WG5 1849 aa27.37■■□□□ 1.97
CACNB1-201ENST00000344140 MAP3K15Q6ZN16 1313 aa27.36■■□□□ 1.97
CACNB1-201ENST00000344140 SRGAP3O43295 1099 aa27.36■■□□□ 1.97
CACNB1-201ENST00000344140 RBM19Q9Y4C8 960 aaKnown RBP27.36■■□□□ 1.97
CACNB1-201ENST00000344140 ITPK1Q13572 414 aa27.36■■□□□ 1.97
CACNB1-201ENST00000344140 CCDC191Q8NCU4 936 aa27.36■■□□□ 1.97
CACNB1-201ENST00000344140 CWC25Q9NXE8 425 aaPredicted RBP27.36■■□□□ 1.97
CACNB1-201ENST00000344140 CRKLP46109 303 aaKnown RBP27.35■■□□□ 1.97
CACNB1-201ENST00000344140 INTS5Q6P9B9 1019 aaKnown RBP27.35■■□□□ 1.97
CACNB1-201ENST00000344140 SUCLG2Q96I99 432 aa27.35■■□□□ 1.97
CACNB1-201ENST00000344140 COL15A1P39059 1388 aa27.35■■□□□ 1.97
CACNB1-201ENST00000344140 TCIRG1Q13488 830 aa27.34■■□□□ 1.97
CACNB1-201ENST00000344140 A0A087WZG4 1122 aa27.34■■□□□ 1.97
CACNB1-201ENST00000344140 TRIM28Q13263 835 aaKnown RBP27.34■■□□□ 1.97
CACNB1-201ENST00000344140 AFDNP55196 1824 aaKnown RBP27.34■■□□□ 1.97
CACNB1-201ENST00000344140 ISCA1Q9BUE6 129 aa27.33■■□□□ 1.97
CACNB1-201ENST00000344140 EIF5P55010 431 aaKnown RBP27.32■■□□□ 1.96
CACNB1-201ENST00000344140 HSP90AB3PQ58FF7 597 aa27.32■■□□□ 1.96
CACNB1-201ENST00000344140 KAZALD1Q96I82 304 aa27.32■■□□□ 1.96
CACNB1-201ENST00000344140 EXOC6BQ9Y2D4 811 aa27.32■■□□□ 1.96
CACNB1-201ENST00000344140 ERVV-1B6SEH8 477 aa27.32■■□□□ 1.96
CACNB1-201ENST00000344140 GIGYF2Q6Y7W6 1299 aaKnown RBP27.32■■□□□ 1.96
CACNB1-201ENST00000344140 PTF1AQ7RTS3 328 aa27.32■■□□□ 1.96
CACNB1-201ENST00000344140 ARXQ96QS3 562 aa27.32■■□□□ 1.96
CACNB1-201ENST00000344140 BICC1Q9H694 974 aaKnown RBP27.32■■□□□ 1.96
CACNB1-201ENST00000344140 RREB1Q92766 1687 aa27.31■■□□□ 1.96
CACNB1-201ENST00000344140 BTAF1O14981 1849 aa27.31■■□□□ 1.96
CACNB1-201ENST00000344140 H7C1W4 665 aa27.31■■□□□ 1.96
CACNB1-201ENST00000344140 RAB11FIP3O75154 756 aa27.31■■□□□ 1.96
CACNB1-201ENST00000344140 UBE3BQ7Z3V4 1068 aa27.31■■□□□ 1.96
CACNB1-201ENST00000344140 HSP90AB4PQ58FF6 505 aa27.3■■□□□ 1.96
CACNB1-201ENST00000344140 LRRCC1Q9C099 1032 aa27.3■■□□□ 1.96
CACNB1-201ENST00000344140 TRIM37O94972 964 aa27.3■■□□□ 1.96
CACNB1-201ENST00000344140 C8orf34Q49A92 452 aa27.3■■□□□ 1.96
CACNB1-201ENST00000344140 DZIP3Q86Y13 1208 aaKnown RBP27.3■■□□□ 1.96
CACNB1-201ENST00000344140 BCL11BQ9C0K0 894 aaPredicted RBP27.3■■□□□ 1.96
CACNB1-201ENST00000344140 APBB1O00213 710 aa27.29■■□□□ 1.96
CACNB1-201ENST00000344140 SURF6O75683 361 aaKnown RBP27.29■■□□□ 1.96
CACNB1-201ENST00000344140 CASP7P55210 303 aa27.29■■□□□ 1.96
CACNB1-201ENST00000344140 NOP58Q9Y2X3 529 aaKnown RBP27.27■■□□□ 1.96
CACNB1-201ENST00000344140 COL5A3P25940 1745 aaPredicted RBP27.27■■□□□ 1.96
CACNB1-201ENST00000344140 CNTNAP4Q9C0A0 1308 aa27.26■■□□□ 1.95
CACNB1-201ENST00000344140 SMARCA5O60264 1052 aaPredicted RBP27.25■■□□□ 1.95
CACNB1-201ENST00000344140 RABL6Q3YEC7 729 aaPredicted RBP27.25■■□□□ 1.95
CACNB1-201ENST00000344140 LINC00116Q8NCU8 138 aa27.25■■□□□ 1.95
CACNB1-201ENST00000344140 HLFQ16534 295 aa27.25■■□□□ 1.95
CACNB1-201ENST00000344140 PLEKHM2Q8IWE5 1019 aa27.25■■□□□ 1.95
CACNB1-201ENST00000344140 TBC1D2BQ9UPU7 963 aa27.25■■□□□ 1.95
CACNB1-201ENST00000344140 RC3H1Q5TC82 1133 aaKnown RBP27.24■■□□□ 1.95
CACNB1-201ENST00000344140 BMP2KLQ5H9B9 411 aa27.23■■□□□ 1.95
CACNB1-201ENST00000344140 EPHA10Q5JZY3 1008 aa27.23■■□□□ 1.95
CACNB1-201ENST00000344140 KIF1BPQ96EK5 621 aa27.23■■□□□ 1.95
CACNB1-201ENST00000344140 MYH14Q7Z406 1995 aaKnown RBP27.23■■□□□ 1.95
CACNB1-201ENST00000344140 JARID2Q92833 1246 aaPredicted RBP27.23■■□□□ 1.95
CACNB1-201ENST00000344140 CCNL1Q9UK58 526 aaPredicted RBP27.23■■□□□ 1.95
CACNB1-201ENST00000344140 EP400Q96L91 3159 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms