RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 N4BP2Q86UW6 1770 aaPredicted RBP24.82■■□□□ 1.56
SYNE4-202ENST00000340477 MAP3K15Q6ZN16 1313 aa24.82■■□□□ 1.56
SYNE4-202ENST00000340477 NUP98P52948 1817 aa24.82■■□□□ 1.56
SYNE4-202ENST00000340477 ERVV-1B6SEH8 477 aa24.81■■□□□ 1.56
SYNE4-202ENST00000340477 DDX21Q9NR30 783 aaKnown RBP eCLIP24.81■■□□□ 1.56
SYNE4-202ENST00000340477 DBF4Q9UBU7 674 aaPredicted RBP24.81■■□□□ 1.56
SYNE4-202ENST00000340477 PXDNLA1KZ92 1463 aa24.81■■□□□ 1.56
SYNE4-202ENST00000340477 TSR2Q969E8 191 aaKnown RBP24.8■■□□□ 1.56
SYNE4-202ENST00000340477 CHPF2Q9P2E5 772 aa24.8■■□□□ 1.56
SYNE4-202ENST00000340477 KIAA1551Q9HCM1 1747 aa24.8■■□□□ 1.56
SYNE4-202ENST00000340477 TTLL7Q6ZT98 887 aa24.79■■□□□ 1.56
SYNE4-202ENST00000340477 CNBD1Q8NA66 436 aa24.79■■□□□ 1.56
SYNE4-202ENST00000340477 NIP7Q9Y221 180 aaKnown RBP eCLIP24.79■■□□□ 1.56
SYNE4-202ENST00000340477 ELL2O00472 640 aaPredicted RBP24.78■■□□□ 1.56
SYNE4-202ENST00000340477 ANXA1P04083 346 aa24.78■■□□□ 1.56
SYNE4-202ENST00000340477 ST5P78524 1137 aa24.78■■□□□ 1.56
SYNE4-202ENST00000340477 PDIA6Q15084 440 aa24.78■■□□□ 1.56
SYNE4-202ENST00000340477 NBPF5PQ86XG9 351 aaPredicted RBP24.78■■□□□ 1.56
SYNE4-202ENST00000340477 ZBTB3Q9H5J0 574 aa24.78■■□□□ 1.56
SYNE4-202ENST00000340477 GRIN3BO60391 1043 aa24.77■■□□□ 1.56
SYNE4-202ENST00000340477 PROSER3Q2NL68 480 aa24.77■■□□□ 1.56
SYNE4-202ENST00000340477 MYH16Q9H6N6 1097 aa24.77■■□□□ 1.56
SYNE4-202ENST00000340477 HYPKQ9NX55 129 aa24.77■■□□□ 1.56
SYNE4-202ENST00000340477 ATP10DQ9P241 1426 aa24.77■■□□□ 1.56
SYNE4-202ENST00000340477 AIMP1Q12904 312 aaKnown RBP24.76■■□□□ 1.55
SYNE4-202ENST00000340477 FANCIQ9NVI1 1328 aa24.76■■□□□ 1.55
SYNE4-202ENST00000340477 A0A0G2JLW4 131 aa24.75■■□□□ 1.55
SYNE4-202ENST00000340477 GOLGA2Q08379 1002 aa24.75■■□□□ 1.55
SYNE4-202ENST00000340477 HLFQ16534 295 aa24.75■■□□□ 1.55
SYNE4-202ENST00000340477 CCDC30Q5VVM6 783 aa24.75■■□□□ 1.55
SYNE4-202ENST00000340477 COPS6Q7L5N1 327 aa24.75■■□□□ 1.55
SYNE4-202ENST00000340477 C8orf58Q8NAV2 365 aa24.75■■□□□ 1.55
SYNE4-202ENST00000340477 XAGE3Q8WTP9 111 aa24.75■■□□□ 1.55
SYNE4-202ENST00000340477 ANKRD36CQ5JPF3 1778 aa24.75■■□□□ 1.55
SYNE4-202ENST00000340477 DPEP1P16444 411 aa24.74■■□□□ 1.55
SYNE4-202ENST00000340477 PRR5LQ6MZQ0 368 aa24.74■■□□□ 1.55
SYNE4-202ENST00000340477 MIER1Q8N108 512 aa24.74■■□□□ 1.55
SYNE4-202ENST00000340477 BRCA1P38398 1863 aaKnown RBP24.74■■□□□ 1.55
SYNE4-202ENST00000340477 CHD4Q14839 1912 aa24.73■■□□□ 1.55
SYNE4-202ENST00000340477 GTF2E1P29083 439 aaPredicted RBP24.73■■□□□ 1.55
SYNE4-202ENST00000340477 PDE6BP35913 854 aa24.73■■□□□ 1.55
SYNE4-202ENST00000340477 TWISTNBQ3B726 338 aaPredicted RBP24.73■■□□□ 1.55
SYNE4-202ENST00000340477 HSP90AB3PQ58FF7 597 aa24.73■■□□□ 1.55
SYNE4-202ENST00000340477 TPTE2Q6XPS3 522 aa24.73■■□□□ 1.55
SYNE4-202ENST00000340477 GIGYF2Q6Y7W6 1299 aaKnown RBP24.73■■□□□ 1.55
SYNE4-202ENST00000340477 LRP10Q7Z4F1 713 aa24.73■■□□□ 1.55
SYNE4-202ENST00000340477 STK31Q9BXU1 1019 aa24.73■■□□□ 1.55
SYNE4-202ENST00000340477 NYXQ9GZU5 481 aa24.73■■□□□ 1.55
SYNE4-202ENST00000340477 WWC3Q9ULE0 1092 aa24.73■■□□□ 1.55
SYNE4-202ENST00000340477 PDZRN3Q9UPQ7 1066 aa24.73■■□□□ 1.55
SYNE4-202ENST00000340477 DLEC1Q9Y238 1755 aa24.72■■□□□ 1.55
SYNE4-202ENST00000340477 BRIP1Q9BX63 1249 aa24.72■■□□□ 1.55
SYNE4-202ENST00000340477 ANKRD31Q8N7Z5 1873 aa24.71■■□□□ 1.55
SYNE4-202ENST00000340477 YBX3P16989 372 aaKnown RBP eCLIP24.71■■□□□ 1.55
SYNE4-202ENST00000340477 PIM2Q9P1W9 311 aa24.71■■□□□ 1.55
SYNE4-202ENST00000340477 FAM177BA6PVY3 158 aa24.7■■□□□ 1.54
SYNE4-202ENST00000340477 H0YIN7 160 aa24.7■■□□□ 1.54
SYNE4-202ENST00000340477 BCS1LQ9Y276 419 aa24.7■■□□□ 1.54
SYNE4-202ENST00000340477 IBTKQ9P2D0 1353 aaPredicted RBP24.69■■□□□ 1.54
SYNE4-202ENST00000340477 GPTP24298 496 aa24.69■■□□□ 1.54
SYNE4-202ENST00000340477 CHRNA5P30532 468 aa24.69■■□□□ 1.54
SYNE4-202ENST00000340477 PARP10Q53GL7 1025 aa24.69■■□□□ 1.54
SYNE4-202ENST00000340477 C2CD5Q86YS7 1000 aa24.69■■□□□ 1.54
SYNE4-202ENST00000340477 TSPYL6Q8N831 410 aa24.69■■□□□ 1.54
SYNE4-202ENST00000340477 ARFGEF1Q9Y6D6 1849 aa24.68■■□□□ 1.54
SYNE4-202ENST00000340477 DALRD3Q5D0E6 543 aaKnown RBP24.68■■□□□ 1.54
SYNE4-202ENST00000340477 PLBD2Q8NHP8 589 aa24.68■■□□□ 1.54
SYNE4-202ENST00000340477 ARFGEF2Q9Y6D5 1785 aa24.67■■□□□ 1.54
SYNE4-202ENST00000340477 ZNF521Q96K83 1311 aa24.67■■□□□ 1.54
SYNE4-202ENST00000340477 DDX58O95786 925 aaKnown RBP24.67■■□□□ 1.54
SYNE4-202ENST00000340477 ANKRD13DQ6ZTN6 518 aa24.67■■□□□ 1.54
SYNE4-202ENST00000340477 PPP1R42Q7Z4L9 355 aa24.67■■□□□ 1.54
SYNE4-202ENST00000340477 CCDC24Q8N4L8 307 aa24.67■■□□□ 1.54
SYNE4-202ENST00000340477 CACNA1FO60840 1977 aa24.66■■□□□ 1.54
SYNE4-202ENST00000340477 EXOSC9Q06265 439 aaKnown RBP24.66■■□□□ 1.54
SYNE4-202ENST00000340477 ZNF34Q8IZ26 560 aa24.66■■□□□ 1.54
SYNE4-202ENST00000340477 E9PSI1 815 aa24.65■■□□□ 1.54
SYNE4-202ENST00000340477 COL11A2P13942 1736 aaPredicted RBP24.65■■□□□ 1.54
SYNE4-202ENST00000340477 UBN2Q6ZU65 1347 aa24.64■■□□□ 1.54
SYNE4-202ENST00000340477 KCNA3P22001 575 aa24.64■■□□□ 1.54
SYNE4-202ENST00000340477 YY1P25490 414 aa24.64■■□□□ 1.54
SYNE4-202ENST00000340477 RIC3Q7Z5B4 369 aa24.64■■□□□ 1.54
SYNE4-202ENST00000340477 GOLGB1Q14789 3259 aaKnown RBP24.63■■□□□ 1.53
SYNE4-202ENST00000340477 TCIRG1Q13488 830 aa24.63■■□□□ 1.53
SYNE4-202ENST00000340477 ZNF622Q969S3 477 aaKnown RBP eCLIP24.63■■□□□ 1.53
SYNE4-202ENST00000340477 SPINK5Q9NQ38 1064 aaPredicted RBP24.63■■□□□ 1.53
SYNE4-202ENST00000340477 RNF123Q5XPI4 1314 aa24.62■■□□□ 1.53
SYNE4-202ENST00000340477 TTLL6Q8N841 843 aa24.62■■□□□ 1.53
SYNE4-202ENST00000340477 UTP14AQ9BVJ6 771 aaKnown RBP24.62■■□□□ 1.53
SYNE4-202ENST00000340477 SUSD4Q5VX71 490 aa24.61■■□□□ 1.53
SYNE4-202ENST00000340477 PHAXQ9H814 394 aaKnown RBP24.61■■□□□ 1.53
SYNE4-202ENST00000340477 CACNA1SQ13698 1873 aa24.6■■□□□ 1.53
SYNE4-202ENST00000340477 NUTM1Q86Y26 1132 aa24.6■■□□□ 1.53
SYNE4-202ENST00000340477 RIC1Q4ADV7 1423 aa24.6■■□□□ 1.53
SYNE4-202ENST00000340477 UTRNP46939 3433 aa24.6■■□□□ 1.53
SYNE4-202ENST00000340477 TCERG1O14776 1098 aaKnown RBP24.59■■□□□ 1.53
SYNE4-202ENST00000340477 NTSR2O95665 410 aa24.59■■□□□ 1.53
SYNE4-202ENST00000340477 ERFEQ4G0M1 354 aa24.59■■□□□ 1.53
SYNE4-202ENST00000340477 STYK1Q6J9G0 422 aa24.59■■□□□ 1.53
SYNE4-202ENST00000340477 CNKSR1Q969H4 720 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms