RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 CICQ96RK0 1608 aaPredicted RBP26.46■■□□□ 1.83
VRK2-201ENST00000340157 KCNQ2O43526 872 aa26.45■■□□□ 1.83
VRK2-201ENST00000340157 FAM161AQ3B820 660 aa26.45■■□□□ 1.83
VRK2-201ENST00000340157 CYP19A1P11511 503 aaPredicted RBP26.45■■□□□ 1.82
VRK2-201ENST00000340157 GRM8O00222 908 aa26.44■■□□□ 1.82
VRK2-201ENST00000340157 C9orf78Q9NZ63 289 aaPredicted RBP26.44■■□□□ 1.82
VRK2-201ENST00000340157 A0A0G2JS52 829 aa26.43■■□□□ 1.82
VRK2-201ENST00000340157 NEXNQ0ZGT2 675 aa26.43■■□□□ 1.82
VRK2-201ENST00000340157 STARD3NLO95772 234 aa26.42■■□□□ 1.82
VRK2-201ENST00000340157 GCKRQ14397 625 aa26.42■■□□□ 1.82
VRK2-201ENST00000340157 MYT1Q01538 1121 aa26.42■■□□□ 1.82
VRK2-201ENST00000340157 POLA2Q14181 598 aa26.42■■□□□ 1.82
VRK2-201ENST00000340157 SSH3Q8TE77 659 aa26.42■■□□□ 1.82
VRK2-201ENST00000340157 KAZALD1Q96I82 304 aa26.42■■□□□ 1.82
VRK2-201ENST00000340157 PPP1R42Q7Z4L9 355 aa26.41■■□□□ 1.82
VRK2-201ENST00000340157 RREB1Q92766 1687 aa26.4■■□□□ 1.82
VRK2-201ENST00000340157 NHSQ6T4R5 1651 aa26.4■■□□□ 1.82
VRK2-201ENST00000340157 TRPC5Q9UL62 973 aaPredicted RBP26.4■■□□□ 1.82
VRK2-201ENST00000340157 ATP5J2-PTCD1G3V325 749 aa26.39■■□□□ 1.82
VRK2-201ENST00000340157 ONECUT3O60422 494 aaPredicted RBP26.39■■□□□ 1.82
VRK2-201ENST00000340157 SUCLG2Q96I99 432 aa26.39■■□□□ 1.82
VRK2-201ENST00000340157 EXOC6BQ9Y2D4 811 aa26.39■■□□□ 1.82
VRK2-201ENST00000340157 PALLDQ8WX93 1383 aa26.39■■□□□ 1.81
VRK2-201ENST00000340157 BTAF1O14981 1849 aa26.39■■□□□ 1.81
VRK2-201ENST00000340157 SBF2Q86WG5 1849 aa26.39■■□□□ 1.81
VRK2-201ENST00000340157 MTX1Q13505 466 aa26.38■■□□□ 1.81
VRK2-201ENST00000340157 ZBTB3Q9H5J0 574 aa26.38■■□□□ 1.81
VRK2-201ENST00000340157 MYH14Q7Z406 1995 aaKnown RBP26.38■■□□□ 1.81
VRK2-201ENST00000340157 ZNF831Q5JPB2 1677 aa26.38■■□□□ 1.81
VRK2-201ENST00000340157 SMARCA5O60264 1052 aaPredicted RBP26.38■■□□□ 1.81
VRK2-201ENST00000340157 PTF1AQ7RTS3 328 aa26.38■■□□□ 1.81
VRK2-201ENST00000340157 ZBTB1Q9Y2K1 713 aa26.38■■□□□ 1.81
VRK2-201ENST00000340157 COL5A3P25940 1745 aaPredicted RBP26.38■■□□□ 1.81
VRK2-201ENST00000340157 LOC102724428A0A0B4J2F2 783 aa26.37■■□□□ 1.81
VRK2-201ENST00000340157 APBB1O00213 710 aa26.37■■□□□ 1.81
VRK2-201ENST00000340157 SIK1P57059 783 aa26.37■■□□□ 1.81
VRK2-201ENST00000340157 SRGAP3O43295 1099 aa26.36■■□□□ 1.81
VRK2-201ENST00000340157 FAM182BQ5T319 152 aa26.36■■□□□ 1.81
VRK2-201ENST00000340157 C16orf71Q8IYS4 520 aaPredicted RBP26.36■■□□□ 1.81
VRK2-201ENST00000340157 ITPK1Q13572 414 aa26.35■■□□□ 1.81
VRK2-201ENST00000340157 ZNF330Q9Y3S2 320 aaPredicted RBP26.35■■□□□ 1.81
VRK2-201ENST00000340157 OTUD7AQ8TE49 926 aaPredicted RBP26.34■■□□□ 1.81
VRK2-201ENST00000340157 BICC1Q9H694 974 aaKnown RBP26.34■■□□□ 1.81
VRK2-201ENST00000340157 ATP6V1AP38606 617 aa26.33■■□□□ 1.81
VRK2-201ENST00000340157 CASP7P55210 303 aa26.33■■□□□ 1.81
VRK2-201ENST00000340157 PLEKHM2Q8IWE5 1019 aa26.33■■□□□ 1.81
VRK2-201ENST00000340157 JARID2Q92833 1246 aaPredicted RBP26.33■■□□□ 1.81
VRK2-201ENST00000340157 EPHA10Q5JZY3 1008 aa26.32■■□□□ 1.8
VRK2-201ENST00000340157 QTRT2Q9H974 415 aaKnown RBP26.32■■□□□ 1.8
VRK2-201ENST00000340157 ANKRD36CQ5JPF3 1778 aa26.32■■□□□ 1.8
VRK2-201ENST00000340157 NUP98P52948 1817 aa26.32■■□□□ 1.8
VRK2-201ENST00000340157 INTS5Q6P9B9 1019 aaKnown RBP26.32■■□□□ 1.8
VRK2-201ENST00000340157 SEPT12Q8IYM1 358 aa26.32■■□□□ 1.8
VRK2-201ENST00000340157 SMARCC1Q92922 1105 aaPredicted RBP26.32■■□□□ 1.8
VRK2-201ENST00000340157 HDAC5Q9UQL6 1122 aa26.32■■□□□ 1.8
VRK2-201ENST00000340157 BRWD3Q6RI45 1802 aa26.31■■□□□ 1.8
VRK2-201ENST00000340157 COL15A1P39059 1388 aa26.31■■□□□ 1.8
VRK2-201ENST00000340157 UBE3BQ7Z3V4 1068 aa26.3■■□□□ 1.8
VRK2-201ENST00000340157 MAP3K15Q6ZN16 1313 aa26.3■■□□□ 1.8
VRK2-201ENST00000340157 A0A087WZG4 1122 aa26.3■■□□□ 1.8
VRK2-201ENST00000340157 ISCA1Q9BUE6 129 aa26.3■■□□□ 1.8
VRK2-201ENST00000340157 IL6STP40189 918 aaPredicted RBP26.29■■□□□ 1.8
VRK2-201ENST00000340157 CRKLP46109 303 aaKnown RBP26.29■■□□□ 1.8
VRK2-201ENST00000340157 KIF6Q6ZMV9 814 aa26.29■■□□□ 1.8
VRK2-201ENST00000340157 LRRCC1Q9C099 1032 aa26.29■■□□□ 1.8
VRK2-201ENST00000340157 BCL11AQ9H165 835 aa26.29■■□□□ 1.8
VRK2-201ENST00000340157 H7C1W4 665 aa26.28■■□□□ 1.8
VRK2-201ENST00000340157 SURF6O75683 361 aaKnown RBP26.28■■□□□ 1.8
VRK2-201ENST00000340157 TCIRG1Q13488 830 aa26.28■■□□□ 1.8
VRK2-201ENST00000340157 CCDC87Q9NVE4 849 aa26.28■■□□□ 1.8
VRK2-201ENST00000340157 CWC25Q9NXE8 425 aaPredicted RBP26.28■■□□□ 1.8
VRK2-201ENST00000340157 SEC24BO95487 1268 aa26.28■■□□□ 1.8
VRK2-201ENST00000340157 BMP2KLQ5H9B9 411 aa26.28■■□□□ 1.8
VRK2-201ENST00000340157 ZBTB47Q9UFB7 747 aaPredicted RBP26.28■■□□□ 1.8
VRK2-201ENST00000340157 EIF5P55010 431 aaKnown RBP26.27■■□□□ 1.8
VRK2-201ENST00000340157 HLFQ16534 295 aa26.27■■□□□ 1.8
VRK2-201ENST00000340157 CCDC191Q8NCU4 936 aa26.27■■□□□ 1.8
VRK2-201ENST00000340157 NOP58Q9Y2X3 529 aaKnown RBP26.27■■□□□ 1.8
VRK2-201ENST00000340157 EP400Q96L91 3159 aa26.27■■□□□ 1.8
VRK2-201ENST00000340157 SALL3Q9BXA9 1300 aa26.27■■□□□ 1.8
VRK2-201ENST00000340157 TUBGCP6Q96RT7 1819 aa26.26■■□□□ 1.79
VRK2-201ENST00000340157 LY75O60449 1722 aa26.26■■□□□ 1.79
VRK2-201ENST00000340157 GIGYF2Q6Y7W6 1299 aaKnown RBP26.25■■□□□ 1.79
VRK2-201ENST00000340157 GSPT1P15170 499 aaKnown RBP26.25■■□□□ 1.79
VRK2-201ENST00000340157 RABL6Q3YEC7 729 aaPredicted RBP26.25■■□□□ 1.79
VRK2-201ENST00000340157 PA2G4Q9UQ80 394 aaKnown RBP26.25■■□□□ 1.79
VRK2-201ENST00000340157 RAB11FIP3O75154 756 aa26.24■■□□□ 1.79
VRK2-201ENST00000340157 TRIM28Q13263 835 aaKnown RBP26.24■■□□□ 1.79
VRK2-201ENST00000340157 ARXQ96QS3 562 aa26.23■■□□□ 1.79
VRK2-201ENST00000340157 KCNQ4P56696 695 aa26.23■■□□□ 1.79
VRK2-201ENST00000340157 LINC00116Q8NCU8 138 aa26.23■■□□□ 1.79
VRK2-201ENST00000340157 TTC22Q5TAA0 569 aa26.22■■□□□ 1.79
VRK2-201ENST00000340157 DZIP3Q86Y13 1208 aaKnown RBP26.22■■□□□ 1.79
VRK2-201ENST00000340157 RHPN1Q8TCX5 695 aa26.22■■□□□ 1.79
VRK2-201ENST00000340157 IL1RAPL2Q9NP60 686 aa26.22■■□□□ 1.79
VRK2-201ENST00000340157 TBC1D2BQ9UPU7 963 aa26.22■■□□□ 1.79
VRK2-201ENST00000340157 TAF1LQ8IZX4 1826 aa26.21■■□□□ 1.79
VRK2-201ENST00000340157 FOXO4P98177 505 aa26.21■■□□□ 1.79
VRK2-201ENST00000340157 RTL5Q5HYW3 569 aaPredicted RBP26.21■■□□□ 1.79
VRK2-201ENST00000340157 ERVV-1B6SEH8 477 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms