RNA–Protein interactions for RNA: ENST00000338745.10

SATB1-201, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 7,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-201ENST00000338745 HOOK3Q86VS8 718 aa19.27■□□□□ 0.67
SATB1-201ENST00000338745 RAB11FIP4Q86YS3 637 aa19.27■□□□□ 0.67
SATB1-201ENST00000338745 CCDC12Q8WUD4 166 aaPredicted RBP19.27■□□□□ 0.67
SATB1-201ENST00000338745 TAOK3Q9H2K8 898 aa19.26■□□□□ 0.67
SATB1-201ENST00000338745 CAVIN4Q5BKX8 364 aa19.26■□□□□ 0.67
SATB1-201ENST00000338745 USHBP1Q8N6Y0 703 aa19.26■□□□□ 0.67
SATB1-201ENST00000338745 PANK2Q9BZ23 570 aa19.26■□□□□ 0.67
SATB1-201ENST00000338745 BAG4O95429 457 aaKnown RBP19.26■□□□□ 0.67
SATB1-201ENST00000338745 PAXBP1Q9Y5B6 917 aa19.26■□□□□ 0.67
SATB1-201ENST00000338745 SCLT1Q96NL6 688 aa19.26■□□□□ 0.67
SATB1-201ENST00000338745 MMRN2Q9H8L6 949 aa19.26■□□□□ 0.67
SATB1-201ENST00000338745 FERMT2Q96AC1 680 aa19.26■□□□□ 0.67
SATB1-201ENST00000338745 DDX19AQ9NUU7 478 aaKnown RBP19.26■□□□□ 0.67
SATB1-201ENST00000338745 IFIT3O14879 490 aaKnown RBP19.26■□□□□ 0.67
SATB1-201ENST00000338745 EFCAB5A4FU69 1503 aa19.25■□□□□ 0.67
SATB1-201ENST00000338745 ALDH1L2Q3SY69 923 aa19.25■□□□□ 0.67
SATB1-201ENST00000338745 ANKIB1Q9P2G1 1089 aa19.25■□□□□ 0.67
SATB1-201ENST00000338745 A0A087WZG4 1122 aa19.25■□□□□ 0.67
SATB1-201ENST00000338745 CCDC196A0A1B0GTZ2 297 aa19.25■□□□□ 0.67
SATB1-201ENST00000338745 PPP4R3AQ6IN85 833 aa19.25■□□□□ 0.67
SATB1-201ENST00000338745 CRACR2BQ8N4Y2 399 aaPredicted RBP19.25■□□□□ 0.67
SATB1-201ENST00000338745 ZNF287Q9HBT7 754 aa19.25■□□□□ 0.67
SATB1-201ENST00000338745 DZIP1Q86YF9 867 aaKnown RBP19.24■□□□□ 0.67
SATB1-201ENST00000338745 PSMD1Q99460 953 aa19.24■□□□□ 0.67
SATB1-201ENST00000338745 UBE2HP62256 183 aa19.24■□□□□ 0.67
SATB1-201ENST00000338745 BMS1Q14692 1282 aaKnown RBP19.24■□□□□ 0.67
SATB1-201ENST00000338745 PUS7Q96PZ0 661 aaKnown RBP19.24■□□□□ 0.67
SATB1-201ENST00000338745 GTF2A1P52655 376 aaPredicted RBP19.23■□□□□ 0.67
SATB1-201ENST00000338745 CATIPQ7Z7H3 387 aa19.23■□□□□ 0.67
SATB1-201ENST00000338745 ZNF444Q8N0Y2 327 aaPredicted RBP19.23■□□□□ 0.67
SATB1-201ENST00000338745 CTCFLQ8NI51 663 aaPredicted RBP19.23■□□□□ 0.67
SATB1-201ENST00000338745 OSCARQ8IYS5 282 aa19.23■□□□□ 0.67
SATB1-201ENST00000338745 TIGD1Q96MW7 591 aa19.23■□□□□ 0.67
SATB1-201ENST00000338745 PAIP2Q9BPZ3 127 aaKnown RBP19.23■□□□□ 0.67
SATB1-201ENST00000338745 ANO6Q4KMQ2 910 aa19.23■□□□□ 0.67
SATB1-201ENST00000338745 GNG11P61952 73 aa19.23■□□□□ 0.67
SATB1-201ENST00000338745 STARD3NLO95772 234 aa19.22■□□□□ 0.67
SATB1-201ENST00000338745 CUL5Q93034 780 aa19.22■□□□□ 0.67
SATB1-201ENST00000338745 RNF216Q9NWF9 866 aaPredicted RBP19.22■□□□□ 0.67
SATB1-201ENST00000338745 TERF1P54274 439 aa19.22■□□□□ 0.67
SATB1-201ENST00000338745 CCDC40Q4G0X9 1142 aa19.22■□□□□ 0.67
SATB1-201ENST00000338745 LRSAM1Q6UWE0 723 aa19.22■□□□□ 0.67
SATB1-201ENST00000338745 CNPY2Q9Y2B0 182 aa19.22■□□□□ 0.67
SATB1-201ENST00000338745 PPM1EQ8WY54 764 aa19.22■□□□□ 0.67
SATB1-201ENST00000338745 HSP90AA4PQ58FG1 418 aa19.22■□□□□ 0.67
SATB1-201ENST00000338745 CALML4Q96GE6 196 aa19.22■□□□□ 0.67
SATB1-201ENST00000338745 TAF7Q15545 349 aaPredicted RBP19.21■□□□□ 0.67
SATB1-201ENST00000338745 TRMT1LQ7Z2T5 733 aaKnown RBP19.21■□□□□ 0.67
SATB1-201ENST00000338745 RAB34Q9BZG1 259 aa19.21■□□□□ 0.67
SATB1-201ENST00000338745 DNAI2Q9GZS0 605 aa19.21■□□□□ 0.67
SATB1-201ENST00000338745 MYO1BO43795 1136 aa19.21■□□□□ 0.67
SATB1-201ENST00000338745 CEP112Q8N8E3 955 aa19.21■□□□□ 0.67
SATB1-201ENST00000338745 EVI5LQ96CN4 794 aa19.21■□□□□ 0.67
SATB1-201ENST00000338745 MNAT1P51948 309 aa19.21■□□□□ 0.67
SATB1-201ENST00000338745 TCERG1LQ5VWI1 586 aa19.21■□□□□ 0.67
SATB1-201ENST00000338745 SPECC1LQ69YQ0 1117 aa19.21■□□□□ 0.67
SATB1-201ENST00000338745 IQCA1Q86XH1 822 aa19.21■□□□□ 0.67
SATB1-201ENST00000338745 MAP3K12Q12852 859 aa19.21■□□□□ 0.67
SATB1-201ENST00000338745 LRPPRCP42704 1394 aaKnown RBP19.2■□□□□ 0.66
SATB1-201ENST00000338745 PCF11O94913 1555 aaKnown RBP19.2■□□□□ 0.66
SATB1-201ENST00000338745 A0A1W2PRG0 241 aa19.2■□□□□ 0.66
SATB1-201ENST00000338745 PRC1O43663 620 aa19.2■□□□□ 0.66
SATB1-201ENST00000338745 SLC5A1P13866 664 aa19.2■□□□□ 0.66
SATB1-201ENST00000338745 TMEM67Q5HYA8 995 aa19.2■□□□□ 0.66
SATB1-201ENST00000338745 CCDC194A0A1B0GVG4 234 aa19.2■□□□□ 0.66
SATB1-201ENST00000338745 IGHDP01880 384 aa19.2■□□□□ 0.66
SATB1-201ENST00000338745 HCLS1P14317 486 aaPredicted RBP19.2■□□□□ 0.66
SATB1-201ENST00000338745 UBASH3AP57075 661 aa19.2■□□□□ 0.66
SATB1-201ENST00000338745 ATAD2Q6PL18 1390 aa19.2■□□□□ 0.66
SATB1-201ENST00000338745 PTCD1O75127 700 aaKnown RBP19.2■□□□□ 0.66
SATB1-201ENST00000338745 DNAAF4Q8WXU2 420 aa19.2■□□□□ 0.66
SATB1-201ENST00000338745 VAT1LQ9HCJ6 419 aa19.2■□□□□ 0.66
SATB1-201ENST00000338745 MCM5P33992 734 aa19.2■□□□□ 0.66
SATB1-201ENST00000338745 ZNF165P49910 485 aa19.2■□□□□ 0.66
SATB1-201ENST00000338745 HOMER2Q9NSB8 354 aa19.2■□□□□ 0.66
SATB1-201ENST00000338745 PUF60Q9UHX1 559 aaKnown RBP19.2■□□□□ 0.66
SATB1-201ENST00000338745 CCDC171Q6TFL3 1326 aa19.19■□□□□ 0.66
SATB1-201ENST00000338745 GOLGA6L9A6NEM1 432 aa19.19■□□□□ 0.66
SATB1-201ENST00000338745 FAM114A1Q8IWE2 563 aa19.19■□□□□ 0.66
SATB1-201ENST00000338745 ZMYND15Q9H091 742 aa19.19■□□□□ 0.66
SATB1-201ENST00000338745 HAND2P61296 217 aa19.19■□□□□ 0.66
SATB1-201ENST00000338745 SLC26A6Q9BXS9 759 aa19.19■□□□□ 0.66
SATB1-201ENST00000338745 GOLIM4O00461 696 aa19.19■□□□□ 0.66
SATB1-201ENST00000338745 TTC16Q8NEE8 873 aa19.19■□□□□ 0.66
SATB1-201ENST00000338745 UVSSAQ2YD98 709 aa19.19■□□□□ 0.66
SATB1-201ENST00000338745 DRC1Q96MC2 740 aa19.19■□□□□ 0.66
SATB1-201ENST00000338745 TRIM27P14373 513 aa19.19■□□□□ 0.66
SATB1-201ENST00000338745 PRIMPOLQ96LW4 560 aa19.19■□□□□ 0.66
SATB1-201ENST00000338745 ZC3H6P61129 1189 aaKnown RBP19.18■□□□□ 0.66
SATB1-201ENST00000338745 IFIT5Q13325 482 aaKnown RBP19.18■□□□□ 0.66
SATB1-201ENST00000338745 PPM1FP49593 454 aaPredicted RBP19.18■□□□□ 0.66
SATB1-201ENST00000338745 MAP3K2Q9Y2U5 619 aa19.18■□□□□ 0.66
SATB1-201ENST00000338745 FSD2A1L4K1 749 aa19.18■□□□□ 0.66
SATB1-201ENST00000338745 SYCP3Q8IZU3 236 aa19.18■□□□□ 0.66
SATB1-201ENST00000338745 RSPH14Q9UHP6 348 aa19.18■□□□□ 0.66
SATB1-201ENST00000338745 METAP2P50579 478 aaKnown RBP eCLIP19.18■□□□□ 0.66
SATB1-201ENST00000338745 KRT222Q8N1A0 295 aa19.18■□□□□ 0.66
SATB1-201ENST00000338745 USP16Q9Y5T5 823 aa19.18■□□□□ 0.66
SATB1-201ENST00000338745 AMPD3Q01432 767 aa19.18■□□□□ 0.66
SATB1-201ENST00000338745 NUDT16Q96DE0 195 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms