RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 ADCK5Q3MIX3 580 aa17.96■□□□□ 0.47
UBA1-201ENST00000335972 BOLA2Q9H3K6 86 aa17.96■□□□□ 0.47
UBA1-201ENST00000335972 LARGE1O95461 756 aa17.96■□□□□ 0.47
UBA1-201ENST00000335972 CASTP20810 708 aaKnown RBP17.96■□□□□ 0.47
UBA1-201ENST00000335972 AK2P54819 239 aa17.96■□□□□ 0.47
UBA1-201ENST00000335972 XAGE3Q8WTP9 111 aa17.96■□□□□ 0.47
UBA1-201ENST00000335972 FAM227BQ96M60 508 aa17.96■□□□□ 0.47
UBA1-201ENST00000335972 CHD2O14647 1828 aaKnown RBP17.96■□□□□ 0.47
UBA1-201ENST00000335972 ESPNB1AK53 854 aa17.96■□□□□ 0.47
UBA1-201ENST00000335972 MYD88Q99836 296 aa17.96■□□□□ 0.47
UBA1-201ENST00000335972 COPS6Q7L5N1 327 aa17.95■□□□□ 0.46
UBA1-201ENST00000335972 EAF2Q96CJ1 260 aaPredicted RBP17.95■□□□□ 0.46
UBA1-201ENST00000335972 ATP5J2-PTCD1G3V325 749 aa17.95■□□□□ 0.46
UBA1-201ENST00000335972 GRM8O00222 908 aa17.95■□□□□ 0.46
UBA1-201ENST00000335972 PTCD1O75127 700 aaKnown RBP17.95■□□□□ 0.46
UBA1-201ENST00000335972 HOXB7P09629 217 aa17.95■□□□□ 0.46
UBA1-201ENST00000335972 EPHA10Q5JZY3 1008 aa17.95■□□□□ 0.46
UBA1-201ENST00000335972 USP16Q9Y5T5 823 aa17.95■□□□□ 0.46
UBA1-201ENST00000335972 BRD1O95696 1058 aa17.95■□□□□ 0.46
UBA1-201ENST00000335972 IGKV5-2P06315 115 aa17.95■□□□□ 0.46
UBA1-201ENST00000335972 ZNF496Q96IT1 587 aaPredicted RBP17.95■□□□□ 0.46
UBA1-201ENST00000335972 PXDNLA1KZ92 1463 aa17.95■□□□□ 0.46
UBA1-201ENST00000335972 RAD50Q92878 1312 aa17.95■□□□□ 0.46
UBA1-201ENST00000335972 SASH1O94885 1247 aa17.94■□□□□ 0.46
UBA1-201ENST00000335972 CHGBP05060 677 aa17.94■□□□□ 0.46
UBA1-201ENST00000335972 CUL4AQ13619 759 aa17.94■□□□□ 0.46
UBA1-201ENST00000335972 NPHP4O75161 1426 aaPredicted RBP17.94■□□□□ 0.46
UBA1-201ENST00000335972 PDIA6Q15084 440 aa17.94■□□□□ 0.46
UBA1-201ENST00000335972 ECHDC1Q9NTX5 307 aa17.94■□□□□ 0.46
UBA1-201ENST00000335972 KCNJ4P48050 445 aa17.94■□□□□ 0.46
UBA1-201ENST00000335972 ANAPC15P60006 121 aa17.94■□□□□ 0.46
UBA1-201ENST00000335972 ZNF790Q6PG37 636 aa17.94■□□□□ 0.46
UBA1-201ENST00000335972 MPNDQ8N594 471 aa17.94■□□□□ 0.46
UBA1-201ENST00000335972 JAKMIP1Q96N16 626 aaKnown RBP17.94■□□□□ 0.46
UBA1-201ENST00000335972 GLRX3O76003 335 aaKnown RBP17.93■□□□□ 0.46
UBA1-201ENST00000335972 RUFY3Q7L099 469 aa17.93■□□□□ 0.46
UBA1-201ENST00000335972 ERBB3P21860 1342 aa17.93■□□□□ 0.46
UBA1-201ENST00000335972 G3BP1Q13283 466 aaKnown RBP eCLIP17.93■□□□□ 0.463e-7■■■□□ 14.7
UBA1-201ENST00000335972 CACNA1FO60840 1977 aa17.93■□□□□ 0.46
UBA1-201ENST00000335972 MCM2P49736 904 aa17.92■□□□□ 0.46
UBA1-201ENST00000335972 CCDC83Q8IWF9 413 aa17.92■□□□□ 0.46
UBA1-201ENST00000335972 NECAB1Q8N987 351 aa17.92■□□□□ 0.46
UBA1-201ENST00000335972 AOX1Q06278 1338 aa17.92■□□□□ 0.46
UBA1-201ENST00000335972 HSP90AB4PQ58FF6 505 aa17.92■□□□□ 0.46
UBA1-201ENST00000335972 HYPKQ9NX55 129 aa17.92■□□□□ 0.46
UBA1-201ENST00000335972 LINS1Q8NG48 757 aa17.91■□□□□ 0.46
UBA1-201ENST00000335972 DDX21Q9NR30 783 aaKnown RBP eCLIP17.91■□□□□ 0.46
UBA1-201ENST00000335972 TAF6LQ9Y6J9 622 aa17.91■□□□□ 0.46
UBA1-201ENST00000335972 ALDH1L1O75891 902 aa17.9■□□□□ 0.46
UBA1-201ENST00000335972 ANP32BQ92688 251 aaKnown RBP17.9■□□□□ 0.46
UBA1-201ENST00000335972 ISY1Q9ULR0 285 aaKnown RBP17.9■□□□□ 0.46
UBA1-201ENST00000335972 CNPY2Q9Y2B0 182 aa17.9■□□□□ 0.46
UBA1-201ENST00000335972 NMIQ13287 307 aaPredicted RBP17.9■□□□□ 0.46
UBA1-201ENST00000335972 USP48Q86UV5 1035 aa17.9■□□□□ 0.46
UBA1-201ENST00000335972 TUBGCP6Q96RT7 1819 aa17.9■□□□□ 0.46
UBA1-201ENST00000335972 DDX58O95786 925 aaKnown RBP17.9■□□□□ 0.46
UBA1-201ENST00000335972 TATP17735 454 aaPredicted RBP17.9■□□□□ 0.46
UBA1-201ENST00000335972 ZNF445P59923 1031 aa17.9■□□□□ 0.46
UBA1-201ENST00000335972 SLC52A2Q9HAB3 445 aa17.89■□□□□ 0.45
UBA1-201ENST00000335972 MED1Q15648 1581 aaPredicted RBP17.89■□□□□ 0.45
UBA1-201ENST00000335972 ATF3P18847 181 aa17.89■□□□□ 0.45
UBA1-201ENST00000335972 CHMP3Q9Y3E7 222 aa17.89■□□□□ 0.45
UBA1-201ENST00000335972 NPHP3Q7Z494 1330 aa17.89■□□□□ 0.45
UBA1-201ENST00000335972 UBE3BQ7Z3V4 1068 aa17.89■□□□□ 0.45
UBA1-201ENST00000335972 FSD1Q9BTV5 496 aa17.89■□□□□ 0.45
UBA1-201ENST00000335972 RGPD5Q99666 1765 aa17.88■□□□□ 0.45
UBA1-201ENST00000335972 PHKG2P15735 406 aa17.88■□□□□ 0.45
UBA1-201ENST00000335972 CLCN1P35523 988 aa17.88■□□□□ 0.45
UBA1-201ENST00000335972 KDM3BQ7LBC6 1761 aa17.88■□□□□ 0.45
UBA1-201ENST00000335972 A0A0D9SFI3 127 aa17.88■□□□□ 0.45
UBA1-201ENST00000335972 FIBPO43427 364 aa17.88■□□□□ 0.45
UBA1-201ENST00000335972 TTC14Q96N46 770 aa17.88■□□□□ 0.45
UBA1-201ENST00000335972 GPATCH3Q96I76 525 aa17.88■□□□□ 0.45
UBA1-201ENST00000335972 C19orf44Q9H6X5 657 aa17.88■□□□□ 0.45
UBA1-201ENST00000335972 NEURL1BA8MQ27 555 aa17.87■□□□□ 0.45
UBA1-201ENST00000335972 CYP27B1O15528 508 aa17.87■□□□□ 0.45
UBA1-201ENST00000335972 MTX1Q13505 466 aa17.87■□□□□ 0.45
UBA1-201ENST00000335972 PDRG1Q9NUG6 133 aa17.87■□□□□ 0.45
UBA1-201ENST00000335972 TTC41PQ6P2S7 1318 aa17.87■□□□□ 0.45
UBA1-201ENST00000335972 NEXNQ0ZGT2 675 aa17.87■□□□□ 0.45
UBA1-201ENST00000335972 TTC5Q8N0Z6 440 aa17.87■□□□□ 0.45
UBA1-201ENST00000335972 INTS4Q96HW7 963 aaKnown RBP17.87■□□□□ 0.45
UBA1-201ENST00000335972 RBM8AQ9Y5S9 174 aaKnown RBP17.87■□□□□ 0.45
UBA1-201ENST00000335972 SLFNL1Q499Z3 407 aa17.86■□□□□ 0.45
UBA1-201ENST00000335972 LIMCH1Q9UPQ0 1083 aa17.86■□□□□ 0.45
UBA1-201ENST00000335972 SMC3Q9UQE7 1217 aa17.86■□□□□ 0.45
UBA1-201ENST00000335972 RPAP1Q9BWH6 1393 aaPredicted RBP17.86■□□□□ 0.45
UBA1-201ENST00000335972 SYT1P21579 422 aa17.86■□□□□ 0.45
UBA1-201ENST00000335972 CCDC173Q0VFZ6 552 aa17.86■□□□□ 0.45
UBA1-201ENST00000335972 GCKRQ14397 625 aa17.86■□□□□ 0.45
UBA1-201ENST00000335972 C1orf167Q5SNV9 1468 aa17.86■□□□□ 0.45
UBA1-201ENST00000335972 KDM6AO15550 1401 aaPredicted RBP17.86■□□□□ 0.45
UBA1-201ENST00000335972 VPS37CA5D8V6 355 aaPredicted RBP17.85■□□□□ 0.45
UBA1-201ENST00000335972 HSPA2P54652 639 aa17.85■□□□□ 0.45
UBA1-201ENST00000335972 ZNF330Q9Y3S2 320 aaPredicted RBP17.85■□□□□ 0.45
UBA1-201ENST00000335972 STK3Q13188 491 aa17.85■□□□□ 0.45
UBA1-201ENST00000335972 LARP1Q6PKG0 1096 aaKnown RBP17.85■□□□□ 0.45
UBA1-201ENST00000335972 ANKRD13DQ6ZTN6 518 aa17.85■□□□□ 0.45
UBA1-201ENST00000335972 CHMP4AQ9BY43 222 aa17.85■□□□□ 0.45
UBA1-201ENST00000335972 ZNF589Q86UQ0 364 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms