RNA–Protein interactions for RNA: ENST00000335005.10

ITM2C-203, Transcript of integral membrane protein 2C, humanhuman

TSL 1 (best) BASIC

Gene ITM2C, Length 1,889 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-203ENST00000335005 ARFGEF2Q9Y6D5 1785 aa28.52■■■□□ 2.16
ITM2C-203ENST00000335005 GOLGA6L22H0YM25 854 aa28.52■■■□□ 2.16
ITM2C-203ENST00000335005 LRP10Q7Z4F1 713 aa28.52■■■□□ 2.16
ITM2C-203ENST00000335005 SUCLG2Q96I99 432 aa28.52■■■□□ 2.16
ITM2C-203ENST00000335005 ZNF496Q96IT1 587 aaPredicted RBP28.52■■■□□ 2.16
ITM2C-203ENST00000335005 AFDNP55196 1824 aaKnown RBP28.51■■■□□ 2.16
ITM2C-203ENST00000335005 IGKV5-2P06315 115 aa28.51■■■□□ 2.15
ITM2C-203ENST00000335005 HSPA4P34932 840 aa28.51■■■□□ 2.15
ITM2C-203ENST00000335005 OS9Q13438 667 aaPredicted RBP28.51■■■□□ 2.15
ITM2C-203ENST00000335005 IL25Q9H293 177 aa28.51■■■□□ 2.15
ITM2C-203ENST00000335005 RAD50Q92878 1312 aa28.51■■■□□ 2.15
ITM2C-203ENST00000335005 SNRPA1P09661 255 aaKnown RBP28.51■■■□□ 2.15
ITM2C-203ENST00000335005 CUL4AQ13619 759 aa28.51■■■□□ 2.15
ITM2C-203ENST00000335005 CHRNA2Q15822 529 aa28.51■■■□□ 2.15
ITM2C-203ENST00000335005 UBR2Q8IWV8 1755 aa28.5■■■□□ 2.15
ITM2C-203ENST00000335005 GZF1Q9H116 711 aaPredicted RBP28.5■■■□□ 2.15
ITM2C-203ENST00000335005 ABCA3Q99758 1704 aa28.5■■■□□ 2.15
ITM2C-203ENST00000335005 COL15A1P39059 1388 aa28.49■■■□□ 2.15
ITM2C-203ENST00000335005 TMX3Q96JJ7 454 aa28.49■■■□□ 2.15
ITM2C-203ENST00000335005 NEURL1BA8MQ27 555 aa28.49■■■□□ 2.15
ITM2C-203ENST00000335005 RIC3Q7Z5B4 369 aa28.49■■■□□ 2.15
ITM2C-203ENST00000335005 ZGPATQ8N5A5 531 aaKnown RBP28.49■■■□□ 2.15
ITM2C-203ENST00000335005 METTL22Q9BUU2 404 aaPredicted RBP28.49■■■□□ 2.15
ITM2C-203ENST00000335005 BICC1Q9H694 974 aaKnown RBP28.49■■■□□ 2.15
ITM2C-203ENST00000335005 ECHDC1Q9NTX5 307 aa28.49■■■□□ 2.15
ITM2C-203ENST00000335005 NEXNQ0ZGT2 675 aa28.48■■■□□ 2.15
ITM2C-203ENST00000335005 AIMP1Q12904 312 aaKnown RBP28.48■■■□□ 2.15
ITM2C-203ENST00000335005 BRINP3Q76B58 766 aa28.48■■■□□ 2.15
ITM2C-203ENST00000335005 XAGE3Q8WTP9 111 aa28.48■■■□□ 2.15
ITM2C-203ENST00000335005 GPATCH3Q96I76 525 aa28.48■■■□□ 2.15
ITM2C-203ENST00000335005 FMNL2Q96PY5 1086 aa28.48■■■□□ 2.15
ITM2C-203ENST00000335005 STRCQ7RTU9 1775 aa28.48■■■□□ 2.15
ITM2C-203ENST00000335005 PAPPAQ13219 1627 aa28.47■■■□□ 2.15
ITM2C-203ENST00000335005 TTC5Q8N0Z6 440 aa28.46■■■□□ 2.15
ITM2C-203ENST00000335005 INTS4Q96HW7 963 aaKnown RBP28.46■■■□□ 2.15
ITM2C-203ENST00000335005 LSG1Q9H089 658 aaKnown RBP28.46■■■□□ 2.15
ITM2C-203ENST00000335005 PA2G4Q9UQ80 394 aaKnown RBP28.46■■■□□ 2.15
ITM2C-203ENST00000335005 GCKRQ14397 625 aa28.46■■■□□ 2.15
ITM2C-203ENST00000335005 MAP4K4O95819 1239 aaPredicted RBP28.45■■■□□ 2.15
ITM2C-203ENST00000335005 COPS6Q7L5N1 327 aa28.44■■■□□ 2.14
ITM2C-203ENST00000335005 XRCC6P12956 609 aaKnown RBP eCLIP28.44■■■□□ 2.14
ITM2C-203ENST00000335005 WDR17Q8IZU2 1322 aa28.44■■■□□ 2.14
ITM2C-203ENST00000335005 IFIT2P09913 472 aaKnown RBP28.43■■■□□ 2.14
ITM2C-203ENST00000335005 MRE11P49959 708 aa28.43■■■□□ 2.14
ITM2C-203ENST00000335005 KLHL40Q2TBA0 621 aa28.43■■■□□ 2.14
ITM2C-203ENST00000335005 SHANK3Q9BYB0 1731 aa28.43■■■□□ 2.14
ITM2C-203ENST00000335005 SOS2Q07890 1332 aaPredicted RBP28.42■■■□□ 2.14
ITM2C-203ENST00000335005 ERBB4Q15303 1308 aa28.42■■■□□ 2.14
ITM2C-203ENST00000335005 SASH1O94885 1247 aa28.42■■■□□ 2.14
ITM2C-203ENST00000335005 MYL6BP14649 208 aa28.42■■■□□ 2.14
ITM2C-203ENST00000335005 PKP1Q13835 747 aa28.42■■■□□ 2.14
ITM2C-203ENST00000335005 ZDHHC9Q9Y397 364 aa28.42■■■□□ 2.14
ITM2C-203ENST00000335005 USP16Q9Y5T5 823 aa28.42■■■□□ 2.14
ITM2C-203ENST00000335005 ANKRD13DQ6ZTN6 518 aa28.42■■■□□ 2.14
ITM2C-203ENST00000335005 COL5A2P05997 1499 aaPredicted RBP28.41■■■□□ 2.14
ITM2C-203ENST00000335005 G3BP1Q13283 466 aaKnown RBP eCLIP28.41■■■□□ 2.14
ITM2C-203ENST00000335005 RUFY2Q8WXA3 655 aa28.41■■■□□ 2.14
ITM2C-203ENST00000335005 NUP188Q5SRE5 1749 aa28.41■■■□□ 2.14
ITM2C-203ENST00000335005 HSPA2P54652 639 aa28.4■■■□□ 2.14
ITM2C-203ENST00000335005 CABP4P57796 275 aa28.4■■■□□ 2.14
ITM2C-203ENST00000335005 PCDH11XQ9BZA7 1347 aa28.4■■■□□ 2.14
ITM2C-203ENST00000335005 PCDH11YQ9BZA8 1340 aa28.4■■■□□ 2.14
ITM2C-203ENST00000335005 AACSQ86V21 672 aa28.4■■■□□ 2.14
ITM2C-203ENST00000335005 EVI5LQ96CN4 794 aa28.4■■■□□ 2.14
ITM2C-203ENST00000335005 MYD88Q99836 296 aa28.4■■■□□ 2.14
ITM2C-203ENST00000335005 KIAA1211Q6ZU35 1233 aa28.38■■■□□ 2.13
ITM2C-203ENST00000335005 SNX14Q9Y5W7 946 aa28.38■■■□□ 2.13
ITM2C-203ENST00000335005 EAF2Q96CJ1 260 aaPredicted RBP28.37■■■□□ 2.13
ITM2C-203ENST00000335005 DIAPH3Q9NSV4 1193 aa28.37■■■□□ 2.13
ITM2C-203ENST00000335005 KCPQ6ZWJ8 1503 aa28.36■■■□□ 2.13
ITM2C-203ENST00000335005 RABL6Q3YEC7 729 aaPredicted RBP28.36■■■□□ 2.13
ITM2C-203ENST00000335005 KCNB2Q92953 911 aa28.36■■■□□ 2.13
ITM2C-203ENST00000335005 COPRSQ9NQ92 184 aa28.36■■■□□ 2.13
ITM2C-203ENST00000335005 LMBRD1Q9NUN5 540 aa28.36■■■□□ 2.13
ITM2C-203ENST00000335005 CWC27Q6UX04 472 aaKnown RBP28.36■■■□□ 2.13
ITM2C-203ENST00000335005 TTC14Q96N46 770 aa28.36■■■□□ 2.13
ITM2C-203ENST00000335005 UPF3BQ9BZI7 483 aaKnown RBP28.36■■■□□ 2.13
ITM2C-203ENST00000335005 GRPEL1Q9HAV7 217 aa28.36■■■□□ 2.13
ITM2C-203ENST00000335005 PRDM11Q9NQV5 511 aa28.36■■■□□ 2.13
ITM2C-203ENST00000335005 SNRKQ9NRH2 765 aa28.36■■■□□ 2.13
ITM2C-203ENST00000335005 ERVV-2B6SEH9 535 aa28.35■■■□□ 2.13
ITM2C-203ENST00000335005 HIP1O00291 1037 aa28.35■■■□□ 2.13
ITM2C-203ENST00000335005 NKX1-1Q15270 411 aaPredicted RBP28.35■■■□□ 2.13
ITM2C-203ENST00000335005 MCTP1Q6DN14 999 aa28.35■■■□□ 2.13
ITM2C-203ENST00000335005 BRD1O95696 1058 aa28.34■■■□□ 2.13
ITM2C-203ENST00000335005 EPHA10Q5JZY3 1008 aa28.34■■■□□ 2.13
ITM2C-203ENST00000335005 PLBD2Q8NHP8 589 aa28.34■■■□□ 2.13
ITM2C-203ENST00000335005 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.34■■■□□ 2.13
ITM2C-203ENST00000335005 NHSL1Q5SYE7 1610 aa28.34■■■□□ 2.13
ITM2C-203ENST00000335005 ZCRB1Q8TBF4 217 aaKnown RBP28.34■■■□□ 2.13
ITM2C-203ENST00000335005 DDX49Q9Y6V7 483 aaKnown RBP28.34■■■□□ 2.13
ITM2C-203ENST00000335005 RFX5P48382 616 aaPredicted RBP28.33■■■□□ 2.13
ITM2C-203ENST00000335005 TJP1Q07157 1748 aa28.33■■■□□ 2.13
ITM2C-203ENST00000335005 TNS2Q63HR2 1409 aa28.32■■■□□ 2.12
ITM2C-203ENST00000335005 CASP7P55210 303 aa28.31■■■□□ 2.12
ITM2C-203ENST00000335005 RASEFQ8IZ41 740 aa28.31■■■□□ 2.12
ITM2C-203ENST00000335005 CARD10Q9BWT7 1032 aa28.31■■■□□ 2.12
ITM2C-203ENST00000335005 TOM1L2Q6ZVM7 507 aa28.3■■■□□ 2.12
ITM2C-203ENST00000335005 FAM43AQ8N2R8 423 aa28.3■■■□□ 2.12
ITM2C-203ENST00000335005 SLAIN2Q9P270 581 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms