RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 IQCA1Q86XH1 822 aa19.91■□□□□ 0.78
TRAPPC11-201ENST00000334690 TNNQ9UQP3 1299 aa19.91■□□□□ 0.78
TRAPPC11-201ENST00000334690 ZSCAN12O43309 604 aa19.9■□□□□ 0.78
TRAPPC11-201ENST00000334690 ANKRD24Q8TF21 1146 aa19.9■□□□□ 0.78
TRAPPC11-201ENST00000334690 LARP6Q9BRS8 491 aaKnown RBP19.9■□□□□ 0.78
TRAPPC11-201ENST00000334690 MINDY4BA8MYZ0 360 aa19.9■□□□□ 0.78
TRAPPC11-201ENST00000334690 SLC5A1P13866 664 aa19.9■□□□□ 0.78
TRAPPC11-201ENST00000334690 GUCY1B3Q02153 619 aa19.9■□□□□ 0.78
TRAPPC11-201ENST00000334690 CTCFLQ8NI51 663 aaPredicted RBP19.9■□□□□ 0.78
TRAPPC11-201ENST00000334690 TEX14Q8IWB6 1497 aa19.9■□□□□ 0.78
TRAPPC11-201ENST00000334690 SYCP1Q15431 976 aa19.9■□□□□ 0.78
TRAPPC11-201ENST00000334690 FSIP1Q8NA03 581 aa19.9■□□□□ 0.78
TRAPPC11-201ENST00000334690 TANGO6Q9C0B7 1094 aa19.9■□□□□ 0.78
TRAPPC11-201ENST00000334690 CLIP2Q9UDT6 1046 aa19.9■□□□□ 0.78
TRAPPC11-201ENST00000334690 SLC12A7Q9Y666 1083 aa19.9■□□□□ 0.78
TRAPPC11-201ENST00000334690 ANXA1P04083 346 aa19.9■□□□□ 0.78
TRAPPC11-201ENST00000334690 RDXP35241 583 aaKnown RBP19.9■□□□□ 0.78
TRAPPC11-201ENST00000334690 ZFYVE27Q5T4F4 411 aa19.9■□□□□ 0.78
TRAPPC11-201ENST00000334690 ZBTB3Q9H5J0 574 aa19.9■□□□□ 0.78
TRAPPC11-201ENST00000334690 ZSCAN22P10073 491 aaPredicted RBP19.89■□□□□ 0.78
TRAPPC11-201ENST00000334690 CCDC181Q5TID7 509 aa19.89■□□□□ 0.78
TRAPPC11-201ENST00000334690 ZSCAN16Q9H4T2 348 aaPredicted RBP19.89■□□□□ 0.78
TRAPPC11-201ENST00000334690 ZNF165P49910 485 aa19.89■□□□□ 0.77
TRAPPC11-201ENST00000334690 ZHX3Q9H4I2 956 aa19.89■□□□□ 0.77
TRAPPC11-201ENST00000334690 NPATQ14207 1427 aa19.89■□□□□ 0.77
TRAPPC11-201ENST00000334690 TTF1Q15361 905 aaPredicted RBP19.89■□□□□ 0.77
TRAPPC11-201ENST00000334690 NUTM2BA6NNL0 878 aaPredicted RBP19.88■□□□□ 0.77
TRAPPC11-201ENST00000334690 NUTM2EB1AL46 878 aaPredicted RBP19.88■□□□□ 0.77
TRAPPC11-201ENST00000334690 CCT2P78371 535 aaKnown RBP19.88■□□□□ 0.77
TRAPPC11-201ENST00000334690 ZSCAN23Q3MJ62 389 aa19.88■□□□□ 0.77
TRAPPC11-201ENST00000334690 NUTM2AQ8IVF1 878 aaPredicted RBP19.88■□□□□ 0.77
TRAPPC11-201ENST00000334690 CHPF2Q9P2E5 772 aa19.88■□□□□ 0.77
TRAPPC11-201ENST00000334690 RIMS2Q9UQ26 1411 aa19.88■□□□□ 0.77
TRAPPC11-201ENST00000334690 FLT4P35916 1363 aa19.88■□□□□ 0.77
TRAPPC11-201ENST00000334690 LRSAM1Q6UWE0 723 aa19.88■□□□□ 0.77
TRAPPC11-201ENST00000334690 LDHAL6AQ6ZMR3 332 aa19.88■□□□□ 0.77
TRAPPC11-201ENST00000334690 EIF5P55010 431 aaKnown RBP19.88■□□□□ 0.77
TRAPPC11-201ENST00000334690 IQCEQ6IPM2 695 aa19.88■□□□□ 0.77
TRAPPC11-201ENST00000334690 TSPYL6Q8N831 410 aa19.88■□□□□ 0.77
TRAPPC11-201ENST00000334690 PRM3Q9NNZ6 103 aa19.88■□□□□ 0.77
TRAPPC11-201ENST00000334690 IFIT3O14879 490 aaKnown RBP19.88■□□□□ 0.77
TRAPPC11-201ENST00000334690 A0A1W2PP64 1363 aa19.88■□□□□ 0.77
TRAPPC11-201ENST00000334690 RNF123Q5XPI4 1314 aa19.87■□□□□ 0.77
TRAPPC11-201ENST00000334690 ATP5J2-PTCD1G3V325 749 aa19.87■□□□□ 0.77
TRAPPC11-201ENST00000334690 HMGB2P26583 209 aaKnown RBP19.87■□□□□ 0.77
TRAPPC11-201ENST00000334690 USP16Q9Y5T5 823 aa19.87■□□□□ 0.77
TRAPPC11-201ENST00000334690 CEP85Q6P2H3 762 aa19.87■□□□□ 0.77
TRAPPC11-201ENST00000334690 GRM8O00222 908 aa19.87■□□□□ 0.77
TRAPPC11-201ENST00000334690 GSDMDP57764 484 aa19.87■□□□□ 0.77
TRAPPC11-201ENST00000334690 KSR2Q6VAB6 950 aa19.87■□□□□ 0.77
TRAPPC11-201ENST00000334690 GOLGA8AA7E2F4 631 aa19.86■□□□□ 0.77
TRAPPC11-201ENST00000334690 ADCY5O95622 1261 aa19.86■□□□□ 0.77
TRAPPC11-201ENST00000334690 SSBP05455 408 aaKnown RBP eCLIP19.86■□□□□ 0.77
TRAPPC11-201ENST00000334690 TOP1P11387 765 aaKnown RBP19.86■□□□□ 0.77
TRAPPC11-201ENST00000334690 ORC3Q9UBD5 711 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC11-201ENST00000334690 H0YHG0 523 aa19.86■□□□□ 0.77
TRAPPC11-201ENST00000334690 STX1AQ16623 288 aa19.86■□□□□ 0.77
TRAPPC11-201ENST00000334690 PHACTR3Q96KR7 559 aa19.86■□□□□ 0.77
TRAPPC11-201ENST00000334690 SOS1Q07889 1333 aaPredicted RBP19.86■□□□□ 0.77
TRAPPC11-201ENST00000334690 ERLIN2O94905 339 aa19.86■□□□□ 0.77
TRAPPC11-201ENST00000334690 BICDL1Q6ZP65 573 aa19.85■□□□□ 0.77
TRAPPC11-201ENST00000334690 LINS1Q8NG48 757 aa19.85■□□□□ 0.77
TRAPPC11-201ENST00000334690 AKAP4Q5JQC9 854 aa19.85■□□□□ 0.77
TRAPPC11-201ENST00000334690 RBM27Q9P2N5 1060 aaKnown RBP19.85■□□□□ 0.77
TRAPPC11-201ENST00000334690 XRCC6P12956 609 aaKnown RBP eCLIP19.85■□□□□ 0.77
TRAPPC11-201ENST00000334690 IARSP41252 1262 aaKnown RBP19.85■□□□□ 0.77
TRAPPC11-201ENST00000334690 CNNM3Q8NE01 707 aa19.85■□□□□ 0.77
TRAPPC11-201ENST00000334690 ZFYP08048 801 aaPredicted RBP19.85■□□□□ 0.77
TRAPPC11-201ENST00000334690 MTHFSDQ2M296 383 aaKnown RBP19.85■□□□□ 0.77
TRAPPC11-201ENST00000334690 SSRP1Q08945 709 aaKnown RBP19.84■□□□□ 0.77
TRAPPC11-201ENST00000334690 CADPS2Q86UW7 1296 aa19.84■□□□□ 0.77
TRAPPC11-201ENST00000334690 C16orf71Q8IYS4 520 aaPredicted RBP19.84■□□□□ 0.77
TRAPPC11-201ENST00000334690 NCOA7Q8NI08 942 aa19.84■□□□□ 0.77
TRAPPC11-201ENST00000334690 MKNK2Q9HBH9 465 aa19.84■□□□□ 0.77
TRAPPC11-201ENST00000334690 RBM8AQ9Y5S9 174 aaKnown RBP19.84■□□□□ 0.77
TRAPPC11-201ENST00000334690 HCLS1P14317 486 aaPredicted RBP19.84■□□□□ 0.77
TRAPPC11-201ENST00000334690 PLEKHM2Q8IWE5 1019 aa19.83■□□□□ 0.77
TRAPPC11-201ENST00000334690 PIBF1Q8WXW3 757 aa19.83■□□□□ 0.77
TRAPPC11-201ENST00000334690 BRF1Q92994 677 aa19.83■□□□□ 0.77
TRAPPC11-201ENST00000334690 TTC41PQ6P2S7 1318 aa19.83■□□□□ 0.77
TRAPPC11-201ENST00000334690 RAB3GAP1Q15042 981 aa19.83■□□□□ 0.77
TRAPPC11-201ENST00000334690 SNRKQ9NRH2 765 aa19.83■□□□□ 0.77
TRAPPC11-201ENST00000334690 GOLGA6L10A6NI86 522 aa19.83■□□□□ 0.76
TRAPPC11-201ENST00000334690 RANBP6O60518 1105 aaKnown RBP19.83■□□□□ 0.76
TRAPPC11-201ENST00000334690 CCDC82Q8N4S0 544 aa19.83■□□□□ 0.76
TRAPPC11-201ENST00000334690 ZRANB1Q9UGI0 708 aa19.83■□□□□ 0.76
TRAPPC11-201ENST00000334690 USP5P45974 858 aa19.83■□□□□ 0.76
TRAPPC11-201ENST00000334690 GBP3Q9H0R5 595 aa19.83■□□□□ 0.76
TRAPPC11-201ENST00000334690 TNNT1P13805 278 aa19.82■□□□□ 0.76
TRAPPC11-201ENST00000334690 KLHL10Q6JEL2 608 aa19.82■□□□□ 0.76
TRAPPC11-201ENST00000334690 TMCO3Q6UWJ1 677 aa19.82■□□□□ 0.76
TRAPPC11-201ENST00000334690 KIAA1328Q86T90 577 aa19.82■□□□□ 0.76
TRAPPC11-201ENST00000334690 ZNF397Q8NF99 534 aaPredicted RBP19.82■□□□□ 0.76
TRAPPC11-201ENST00000334690 XAGE3Q8WTP9 111 aa19.82■□□□□ 0.76
TRAPPC11-201ENST00000334690 ZBTB7BO15156 539 aaPredicted RBP19.82■□□□□ 0.76
TRAPPC11-201ENST00000334690 COPS6Q7L5N1 327 aa19.82■□□□□ 0.76
TRAPPC11-201ENST00000334690 PATL2C9JE40 543 aaKnown RBP19.81■□□□□ 0.76
TRAPPC11-201ENST00000334690 GPTP24298 496 aa19.81■□□□□ 0.76
TRAPPC11-201ENST00000334690 SEC63Q9UGP8 760 aaKnown RBP19.81■□□□□ 0.76
TRAPPC11-201ENST00000334690 DDX46Q7L014 1031 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms