RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 CWC27Q6UX04 472 aaKnown RBP16.37■□□□□ 0.21
SYNE3-201ENST00000334258 ZNF771Q7L3S4 317 aaPredicted RBP16.37■□□□□ 0.21
SYNE3-201ENST00000334258 C16orf45Q96MC5 204 aaPredicted RBP16.37■□□□□ 0.21
SYNE3-201ENST00000334258 SPG7Q9UQ90 795 aa16.37■□□□□ 0.21
SYNE3-201ENST00000334258 SNX14Q9Y5W7 946 aa16.37■□□□□ 0.21
SYNE3-201ENST00000334258 GOLGA6L4A6NEF3 574 aa16.37■□□□□ 0.21
SYNE3-201ENST00000334258 GJB2P29033 226 aa16.37■□□□□ 0.21
SYNE3-201ENST00000334258 RUFY3Q7L099 469 aa16.37■□□□□ 0.21
SYNE3-201ENST00000334258 MAP2P11137 1827 aaKnown RBP16.37■□□□□ 0.21
SYNE3-201ENST00000334258 CDK11BP21127 795 aaKnown RBP16.36■□□□□ 0.21
SYNE3-201ENST00000334258 RASEFQ8IZ41 740 aa16.36■□□□□ 0.21
SYNE3-201ENST00000334258 DDX54Q8TDD1 881 aaKnown RBP16.36■□□□□ 0.21
SYNE3-201ENST00000334258 SALL3Q9BXA9 1300 aa16.36■□□□□ 0.21
SYNE3-201ENST00000334258 PLEKHG3A1L390 1219 aa16.36■□□□□ 0.21
SYNE3-201ENST00000334258 FLIIQ13045 1269 aa16.36■□□□□ 0.21
SYNE3-201ENST00000334258 CDK12Q9NYV4 1490 aaPredicted RBP16.36■□□□□ 0.21
SYNE3-201ENST00000334258 UBTFL1P0CB47 393 aaPredicted RBP16.36■□□□□ 0.21
SYNE3-201ENST00000334258 FERMT3Q86UX7 667 aa16.36■□□□□ 0.21
SYNE3-201ENST00000334258 STAP2Q9UGK3 403 aa16.36■□□□□ 0.21
SYNE3-201ENST00000334258 PHF8Q9UPP1 1060 aa16.36■□□□□ 0.21
SYNE3-201ENST00000334258 SSH2Q76I76 1423 aa16.35■□□□□ 0.21
SYNE3-201ENST00000334258 DLC1Q96QB1 1528 aa16.35■□□□□ 0.21
SYNE3-201ENST00000334258 CCDC186Q7Z3E2 898 aa16.35■□□□□ 0.21
SYNE3-201ENST00000334258 ANKRD26Q9UPS8 1709 aa16.35■□□□□ 0.21
SYNE3-201ENST00000334258 LUZP1Q86V48 1076 aa16.35■□□□□ 0.21
SYNE3-201ENST00000334258 CKAP2LQ8IYA6 745 aa16.35■□□□□ 0.21
SYNE3-201ENST00000334258 ZNF592Q92610 1267 aa16.35■□□□□ 0.21
SYNE3-201ENST00000334258 TRIM5Q9C035 493 aa16.35■□□□□ 0.21
SYNE3-201ENST00000334258 SIRT1Q96EB6 747 aa16.34■□□□□ 0.21
SYNE3-201ENST00000334258 RAD50Q92878 1312 aa16.34■□□□□ 0.21
SYNE3-201ENST00000334258 TECPR2O15040 1411 aa16.34■□□□□ 0.21
SYNE3-201ENST00000334258 SGSM2O43147 1006 aa16.34■□□□□ 0.21
SYNE3-201ENST00000334258 MAP3K11Q16584 847 aa16.34■□□□□ 0.21
SYNE3-201ENST00000334258 FUCA2Q9BTY2 467 aa16.34■□□□□ 0.21
SYNE3-201ENST00000334258 AATKQ6ZMQ8 1374 aa16.34■□□□□ 0.21
SYNE3-201ENST00000334258 USP6P35125 1406 aa16.33■□□□□ 0.21
SYNE3-201ENST00000334258 LRMPQ12912 555 aa16.33■□□□□ 0.2
SYNE3-201ENST00000334258 FAM200AQ8TCP9 573 aa16.33■□□□□ 0.2
SYNE3-201ENST00000334258 JAKMIP1Q96N16 626 aaKnown RBP16.33■□□□□ 0.2
SYNE3-201ENST00000334258 NUP62CLQ9H1M0 184 aa16.33■□□□□ 0.2
SYNE3-201ENST00000334258 LARGE1O95461 756 aa16.33■□□□□ 0.2
SYNE3-201ENST00000334258 KCNJ4P48050 445 aa16.33■□□□□ 0.2
SYNE3-201ENST00000334258 OS9Q13438 667 aaPredicted RBP16.33■□□□□ 0.2
SYNE3-201ENST00000334258 CNTROBQ8N137 903 aa16.33■□□□□ 0.2
SYNE3-201ENST00000334258 PDRG1Q9NUG6 133 aa16.33■□□□□ 0.2
SYNE3-201ENST00000334258 TCHHQ07283 1943 aa16.33■□□□□ 0.2
SYNE3-201ENST00000334258 RGPD8O14715 1765 aaPredicted RBP16.33■□□□□ 0.2
SYNE3-201ENST00000334258 SECISBP2LQ93073 1101 aaKnown RBP16.32■□□□□ 0.2
SYNE3-201ENST00000334258 TNNT1P13805 278 aa16.32■□□□□ 0.2
SYNE3-201ENST00000334258 CCDC30Q5VVM6 783 aa16.32■□□□□ 0.2
SYNE3-201ENST00000334258 FAM173BQ6P4H8 233 aa16.32■□□□□ 0.2
SYNE3-201ENST00000334258 NECAB1Q8N987 351 aa16.32■□□□□ 0.2
SYNE3-201ENST00000334258 MTMR6Q9Y217 621 aa16.32■□□□□ 0.2
SYNE3-201ENST00000334258 CABLES1Q8TDN4 633 aa16.32■□□□□ 0.2
SYNE3-201ENST00000334258 ANKRD7Q92527 254 aa16.32■□□□□ 0.2
SYNE3-201ENST00000334258 TTC14Q96N46 770 aa16.32■□□□□ 0.2
SYNE3-201ENST00000334258 LARP1BQ659C4 914 aaKnown RBP16.31■□□□□ 0.2
SYNE3-201ENST00000334258 TNMDQ9H2S6 317 aa16.31■□□□□ 0.2
SYNE3-201ENST00000334258 ZC3H6P61129 1189 aaKnown RBP16.31■□□□□ 0.2
SYNE3-201ENST00000334258 KRT85P78386 507 aa16.31■□□□□ 0.2
SYNE3-201ENST00000334258 TYRO3Q06418 890 aa16.31■□□□□ 0.2
SYNE3-201ENST00000334258 TPD52L1Q16890 204 aaPredicted RBP16.31■□□□□ 0.2
SYNE3-201ENST00000334258 PRPF40BQ6NWY9 871 aaKnown RBP16.31■□□□□ 0.2
SYNE3-201ENST00000334258 CCDC112Q8NEF3 446 aa16.31■□□□□ 0.2
SYNE3-201ENST00000334258 LRRC59Q96AG4 307 aaKnown RBP16.31■□□□□ 0.2
SYNE3-201ENST00000334258 EYA1Q99502 592 aa16.31■□□□□ 0.2
SYNE3-201ENST00000334258 FEZ1Q99689 392 aa16.31■□□□□ 0.2
SYNE3-201ENST00000334258 CEP170BQ9Y4F5 1589 aaPredicted RBP16.31■□□□□ 0.2
SYNE3-201ENST00000334258 MTHFSDQ2M296 383 aaKnown RBP16.3■□□□□ 0.2
SYNE3-201ENST00000334258 CGNQ9P2M7 1197 aaKnown RBP16.3■□□□□ 0.2
SYNE3-201ENST00000334258 PPP1R42Q7Z4L9 355 aa16.3■□□□□ 0.2
SYNE3-201ENST00000334258 CERS3Q8IU89 383 aa16.3■□□□□ 0.2
SYNE3-201ENST00000334258 NRBP1Q9UHY1 535 aa16.3■□□□□ 0.2
SYNE3-201ENST00000334258 CYP46A1Q9Y6A2 500 aa16.3■□□□□ 0.2
SYNE3-201ENST00000334258 KIF20BQ96Q89 1820 aa16.3■□□□□ 0.2
SYNE3-201ENST00000334258 SRGAP3O43295 1099 aa16.3■□□□□ 0.2
SYNE3-201ENST00000334258 NCBP1Q09161 790 aaKnown RBP16.3■□□□□ 0.2
SYNE3-201ENST00000334258 RHPN1Q8TCX5 695 aa16.3■□□□□ 0.2
SYNE3-201ENST00000334258 LSG1Q9H089 658 aaKnown RBP16.3■□□□□ 0.2
SYNE3-201ENST00000334258 CTIFO43310 598 aaKnown RBP16.29■□□□□ 0.2
SYNE3-201ENST00000334258 LIG1P18858 919 aa16.29■□□□□ 0.2
SYNE3-201ENST00000334258 NAA30Q147X3 362 aaPredicted RBP16.29■□□□□ 0.2
SYNE3-201ENST00000334258 ANO6Q4KMQ2 910 aa16.29■□□□□ 0.2
SYNE3-201ENST00000334258 OGFRQ9NZT2 677 aa16.29■□□□□ 0.2
SYNE3-201ENST00000334258 TFIP11Q9UBB9 837 aaKnown RBP16.29■□□□□ 0.2
SYNE3-201ENST00000334258 SOS1Q07889 1333 aaPredicted RBP16.29■□□□□ 0.2
SYNE3-201ENST00000334258 ARHGAP23Q9P227 1491 aa16.29■□□□□ 0.2
SYNE3-201ENST00000334258 HYPKQ9NX55 129 aa16.29■□□□□ 0.2
SYNE3-201ENST00000334258 DACT1Q9NYF0 836 aa16.29■□□□□ 0.2
SYNE3-201ENST00000334258 USP44Q9H0E7 712 aa16.29■□□□□ 0.2
SYNE3-201ENST00000334258 EPB41L2O43491 1005 aaKnown RBP16.28■□□□□ 0.2
SYNE3-201ENST00000334258 TTC6Q86TZ1 520 aa16.28■□□□□ 0.2
SYNE3-201ENST00000334258 SLIT1O75093 1534 aa16.27■□□□□ 0.2
SYNE3-201ENST00000334258 ADCK5Q3MIX3 580 aa16.27■□□□□ 0.2
SYNE3-201ENST00000334258 RUFY2Q8WXA3 655 aa16.27■□□□□ 0.2
SYNE3-201ENST00000334258 ZSCAN31Q96LW9 406 aaPredicted RBP16.27■□□□□ 0.2
SYNE3-201ENST00000334258 MRVI1Q9Y6F6 885 aa16.27■□□□□ 0.2
SYNE3-201ENST00000334258 AOX1Q06278 1338 aa16.27■□□□□ 0.2
SYNE3-201ENST00000334258 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.27■□□□□ 0.2
SYNE3-201ENST00000334258 SMTNL1A8MU46 457 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms