RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 SIL1Q9H173 461 aa14.3□□□□□ -0.12
HDAC6-201ENST00000334136 ST18O60284 1047 aa14.3□□□□□ -0.12
HDAC6-201ENST00000334136 CDK11BP21127 795 aaKnown RBP14.3□□□□□ -0.12
HDAC6-201ENST00000334136 UBE3BQ7Z3V4 1068 aa14.3□□□□□ -0.12
HDAC6-201ENST00000334136 CLASRPQ8N2M8 674 aaKnown RBP14.29□□□□□ -0.12
HDAC6-201ENST00000334136 NIP7Q9Y221 180 aaKnown RBP eCLIP14.29□□□□□ -0.12
HDAC6-201ENST00000334136 BARGINQ6ZT62 677 aa14.29□□□□□ -0.12
HDAC6-201ENST00000334136 NBPF5PQ86XG9 351 aaPredicted RBP14.29□□□□□ -0.12
HDAC6-201ENST00000334136 RPAP2Q8IXW5 612 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-201ENST00000334136 G2E3Q7L622 706 aa14.28□□□□□ -0.12
HDAC6-201ENST00000334136 JARID2Q92833 1246 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-201ENST00000334136 SYAP1Q96A49 352 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-201ENST00000334136 KIAA1211Q6ZU35 1233 aa14.28□□□□□ -0.12
HDAC6-201ENST00000334136 NWD1Q149M9 1564 aa14.27□□□□□ -0.12
HDAC6-201ENST00000334136 MCTP1Q6DN14 999 aa14.27□□□□□ -0.12
HDAC6-201ENST00000334136 LINS1Q8NG48 757 aa14.27□□□□□ -0.12
HDAC6-201ENST00000334136 MAP2P11137 1827 aaKnown RBP14.27□□□□□ -0.13
HDAC6-201ENST00000334136 NALCNQ8IZF0 1738 aa14.27□□□□□ -0.13
HDAC6-201ENST00000334136 OVOS2A0A0G2JMS6 1433 aa14.27□□□□□ -0.13
HDAC6-201ENST00000334136 RILPL2Q969X0 211 aa14.26□□□□□ -0.13
HDAC6-201ENST00000334136 LRRFIP2Q9Y608 721 aaKnown RBP14.26□□□□□ -0.13
HDAC6-201ENST00000334136 KDRP35968 1356 aa14.26□□□□□ -0.13
HDAC6-201ENST00000334136 IGHMBP2P38935 993 aaKnown RBP14.26□□□□□ -0.13
HDAC6-201ENST00000334136 R3HCC1Q9Y3T6 440 aaKnown RBP14.26□□□□□ -0.13
HDAC6-201ENST00000334136 NASPP49321 788 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-201ENST00000334136 KCNQ4P56696 695 aa14.26□□□□□ -0.13
HDAC6-201ENST00000334136 ERC1Q8IUD2 1116 aa14.26□□□□□ -0.13
HDAC6-201ENST00000334136 ALDH1L1O75891 902 aa14.25□□□□□ -0.13
HDAC6-201ENST00000334136 MARCH10Q8NA82 808 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-201ENST00000334136 RNF214Q8ND24 703 aa14.25□□□□□ -0.13
HDAC6-201ENST00000334136 CEP126Q9P2H0 1117 aa14.25□□□□□ -0.13
HDAC6-201ENST00000334136 KCNQ2O43526 872 aa14.25□□□□□ -0.13
HDAC6-201ENST00000334136 MCM4P33991 863 aa14.25□□□□□ -0.13
HDAC6-201ENST00000334136 IFIT5Q13325 482 aaKnown RBP14.25□□□□□ -0.13
HDAC6-201ENST00000334136 FBXW7Q969H0 707 aa14.24□□□□□ -0.13
HDAC6-201ENST00000334136 NCAPD2Q15021 1401 aa14.24□□□□□ -0.13
HDAC6-201ENST00000334136 RBM10P98175 930 aaKnown RBP14.24□□□□□ -0.13
HDAC6-201ENST00000334136 PLBD2Q8NHP8 589 aa14.24□□□□□ -0.13
HDAC6-201ENST00000334136 CWF19L2Q2TBE0 894 aaKnown RBP14.24□□□□□ -0.13
HDAC6-201ENST00000334136 TPTE2Q6XPS3 522 aa14.24□□□□□ -0.13
HDAC6-201ENST00000334136 FNBP4Q8N3X1 1017 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-201ENST00000334136 GCC1Q96CN9 775 aa14.24□□□□□ -0.13
HDAC6-201ENST00000334136 PKNOX2Q96KN3 472 aa14.24□□□□□ -0.13
HDAC6-201ENST00000334136 KIF20BQ96Q89 1820 aa14.24□□□□□ -0.13
HDAC6-201ENST00000334136 ZNF853P0CG23 659 aa14.23□□□□□ -0.13
HDAC6-201ENST00000334136 RPGRQ92834 1020 aaKnown RBP14.23□□□□□ -0.13
HDAC6-201ENST00000334136 DCAF8L1A6NGE4 600 aa14.23□□□□□ -0.13
HDAC6-201ENST00000334136 GRM8O00222 908 aa14.23□□□□□ -0.13
HDAC6-201ENST00000334136 PALLDQ8WX93 1383 aa14.23□□□□□ -0.13
HDAC6-201ENST00000334136 RGPD8O14715 1765 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-201ENST00000334136 MEIS3Q99687 375 aa14.23□□□□□ -0.13
HDAC6-201ENST00000334136 UTP14AQ9BVJ6 771 aaKnown RBP14.23□□□□□ -0.13
HDAC6-201ENST00000334136 PXDNQ92626 1479 aa14.22□□□□□ -0.13
HDAC6-201ENST00000334136 ERC2O15083 957 aa14.22□□□□□ -0.13
HDAC6-201ENST00000334136 ST5P78524 1137 aa14.22□□□□□ -0.13
HDAC6-201ENST00000334136 ATG3Q9NT62 314 aa14.22□□□□□ -0.13
HDAC6-201ENST00000334136 TNNQ9UQP3 1299 aa14.22□□□□□ -0.13
HDAC6-201ENST00000334136 ZNF521Q96K83 1311 aa14.22□□□□□ -0.13
HDAC6-201ENST00000334136 CRKLP46109 303 aaKnown RBP14.22□□□□□ -0.13
HDAC6-201ENST00000334136 CAVIN1Q6NZI2 390 aaKnown RBP14.22□□□□□ -0.13
HDAC6-201ENST00000334136 EXOC6BQ9Y2D4 811 aa14.22□□□□□ -0.13
HDAC6-201ENST00000334136 ERBB4Q15303 1308 aa14.22□□□□□ -0.13
HDAC6-201ENST00000334136 NLRP3Q96P20 1036 aa14.22□□□□□ -0.13
HDAC6-201ENST00000334136 ANKRD18BA2A2Z9 1011 aa14.21□□□□□ -0.13
HDAC6-201ENST00000334136 PRAMEF22A3QJZ6 481 aa14.21□□□□□ -0.13
HDAC6-201ENST00000334136 GRPEL1Q9HAV7 217 aa14.21□□□□□ -0.13
HDAC6-201ENST00000334136 PARP3Q9Y6F1 533 aa14.21□□□□□ -0.13
HDAC6-201ENST00000334136 LRRFIP1Q32MZ4 808 aaKnown RBP14.21□□□□□ -0.13
HDAC6-201ENST00000334136 LRRCC1Q9C099 1032 aa14.21□□□□□ -0.13
HDAC6-201ENST00000334136 NYXQ9GZU5 481 aa14.21□□□□□ -0.13
HDAC6-201ENST00000334136 ZBTB1Q9Y2K1 713 aa14.21□□□□□ -0.13
HDAC6-201ENST00000334136 HEG1Q9ULI3 1381 aa14.21□□□□□ -0.14
HDAC6-201ENST00000334136 ESPNB1AK53 854 aa14.21□□□□□ -0.14
HDAC6-201ENST00000334136 MYOM1P52179 1685 aa14.21□□□□□ -0.14
HDAC6-201ENST00000334136 COL5A2P05997 1499 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-201ENST00000334136 DDX46Q7L014 1031 aaKnown RBP14.2□□□□□ -0.14
HDAC6-201ENST00000334136 MPNDQ8N594 471 aa14.2□□□□□ -0.14
HDAC6-201ENST00000334136 METTL22Q9BUU2 404 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-201ENST00000334136 POLD1P28340 1107 aa14.2□□□□□ -0.14
HDAC6-201ENST00000334136 METTL24Q5JXM2 366 aa14.2□□□□□ -0.14
HDAC6-201ENST00000334136 IL1RAPL2Q9NP60 686 aa14.2□□□□□ -0.14
HDAC6-201ENST00000334136 TTLL7Q6ZT98 887 aa14.19□□□□□ -0.14
HDAC6-201ENST00000334136 FLAD1Q8NFF5 587 aa14.19□□□□□ -0.14
HDAC6-201ENST00000334136 ZNF622Q969S3 477 aaKnown RBP eCLIP14.19□□□□□ -0.141e-6■□□□□ 10.1
HDAC6-201ENST00000334136 CDC5LQ99459 802 aaKnown RBP14.19□□□□□ -0.14
HDAC6-201ENST00000334136 RLBP1P12271 317 aa14.19□□□□□ -0.14
HDAC6-201ENST00000334136 PARP10Q53GL7 1025 aa14.19□□□□□ -0.14
HDAC6-201ENST00000334136 LMBR1LQ6UX01 489 aa14.19□□□□□ -0.14
HDAC6-201ENST00000334136 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-201ENST00000334136 LDHAL6AQ6ZMR3 332 aa14.19□□□□□ -0.14
HDAC6-201ENST00000334136 DIAPH3Q9NSV4 1193 aa14.19□□□□□ -0.14
HDAC6-201ENST00000334136 IL6STP40189 918 aaPredicted RBP14.18□□□□□ -0.14
HDAC6-201ENST00000334136 CCDC158Q5M9N0 1113 aa14.18□□□□□ -0.14
HDAC6-201ENST00000334136 IRS4O14654 1257 aaPredicted RBP14.18□□□□□ -0.14
HDAC6-201ENST00000334136 CCDC152Q4G0S7 254 aa14.18□□□□□ -0.14
HDAC6-201ENST00000334136 TRMT2AQ8IZ69 625 aaKnown RBP14.18□□□□□ -0.14
HDAC6-201ENST00000334136 FAM89AQ96GI7 184 aa14.18□□□□□ -0.14
HDAC6-201ENST00000334136 ZNF219Q9P2Y4 722 aaPredicted RBP14.18□□□□□ -0.14
HDAC6-201ENST00000334136 GNL3LQ9NVN8 582 aaKnown RBP14.18□□□□□ -0.14
HDAC6-201ENST00000334136 SETD1AO15047 1707 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms