RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 SPG7Q9UQ90 795 aa24.82■■□□□ 1.56
LINC01006-201ENST00000333319 FOXD4L5Q5VV16 416 aaPredicted RBP24.81■■□□□ 1.56
LINC01006-201ENST00000333319 RIC3Q7Z5B4 369 aa24.81■■□□□ 1.56
LINC01006-201ENST00000333319 CABLES1Q8TDN4 633 aa24.81■■□□□ 1.56
LINC01006-201ENST00000333319 FOXD4L4Q8WXT5 416 aaPredicted RBP24.81■■□□□ 1.56
LINC01006-201ENST00000333319 KAZALD1Q96I82 304 aa24.81■■□□□ 1.56
LINC01006-201ENST00000333319 TMEM94Q12767 1356 aa24.81■■□□□ 1.56
LINC01006-201ENST00000333319 CSB-PGBD3P0DP91 1061 aa24.81■■□□□ 1.56
LINC01006-201ENST00000333319 MYL6BP14649 208 aa24.81■■□□□ 1.56
LINC01006-201ENST00000333319 NCLP19338 710 aaKnown RBP24.81■■□□□ 1.56
LINC01006-201ENST00000333319 INTS4Q96HW7 963 aaKnown RBP24.81■■□□□ 1.56
LINC01006-201ENST00000333319 LSG1Q9H089 658 aaKnown RBP24.81■■□□□ 1.56
LINC01006-201ENST00000333319 BICC1Q9H694 974 aaKnown RBP24.81■■□□□ 1.56
LINC01006-201ENST00000333319 UTYO14607 1347 aa24.8■■□□□ 1.56
LINC01006-201ENST00000333319 PRPF40AO75400 957 aaKnown RBP24.8■■□□□ 1.56
LINC01006-201ENST00000333319 IFIT2P09913 472 aaKnown RBP24.8■■□□□ 1.56
LINC01006-201ENST00000333319 ECHDC1Q9NTX5 307 aa24.8■■□□□ 1.56
LINC01006-201ENST00000333319 SCN11AQ9UI33 1791 aa24.8■■□□□ 1.56
LINC01006-201ENST00000333319 IGKV5-2P06315 115 aa24.79■■□□□ 1.56
LINC01006-201ENST00000333319 KIAA1211Q6ZU35 1233 aa24.79■■□□□ 1.56
LINC01006-201ENST00000333319 CHAMP1Q96JM3 812 aa24.79■■□□□ 1.56
LINC01006-201ENST00000333319 MEGF6O75095 1541 aa24.79■■□□□ 1.56
LINC01006-201ENST00000333319 IFNL2Q8IZJ0 200 aa24.78■■□□□ 1.56
LINC01006-201ENST00000333319 GPATCH3Q96I76 525 aa24.78■■□□□ 1.56
LINC01006-201ENST00000333319 RRAGDQ9NQL2 400 aaPredicted RBP24.78■■□□□ 1.56
LINC01006-201ENST00000333319 CHRNA2Q15822 529 aa24.78■■□□□ 1.56
LINC01006-201ENST00000333319 CAVIN1Q6NZI2 390 aaKnown RBP24.78■■□□□ 1.56
LINC01006-201ENST00000333319 LARP1Q6PKG0 1096 aaKnown RBP24.78■■□□□ 1.56
LINC01006-201ENST00000333319 AACSQ86V21 672 aa24.78■■□□□ 1.56
LINC01006-201ENST00000333319 SNX14Q9Y5W7 946 aa24.78■■□□□ 1.56
LINC01006-201ENST00000333319 CRYBG1Q9Y4K1 1723 aa24.78■■□□□ 1.56
LINC01006-201ENST00000333319 C5P01031 1676 aa24.77■■□□□ 1.56
LINC01006-201ENST00000333319 DIAPH3Q9NSV4 1193 aa24.77■■□□□ 1.56
LINC01006-201ENST00000333319 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.77■■□□□ 1.56
LINC01006-201ENST00000333319 XAGE3Q8WTP9 111 aa24.77■■□□□ 1.56
LINC01006-201ENST00000333319 ZNF496Q96IT1 587 aaPredicted RBP24.77■■□□□ 1.56
LINC01006-201ENST00000333319 BRD1O95696 1058 aa24.76■■□□□ 1.55
LINC01006-201ENST00000333319 G3BP1Q13283 466 aaKnown RBP eCLIP24.76■■□□□ 1.55
LINC01006-201ENST00000333319 SASH1O94885 1247 aa24.75■■□□□ 1.55
LINC01006-201ENST00000333319 NEXNQ0ZGT2 675 aa24.75■■□□□ 1.55
LINC01006-201ENST00000333319 COPS6Q7L5N1 327 aa24.75■■□□□ 1.55
LINC01006-201ENST00000333319 COL18A1P39060 1754 aa24.75■■□□□ 1.55
LINC01006-201ENST00000333319 RASEFQ8IZ41 740 aa24.75■■□□□ 1.55
LINC01006-201ENST00000333319 RUFY2Q8WXA3 655 aa24.74■■□□□ 1.55
LINC01006-201ENST00000333319 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.74■■□□□ 1.55
LINC01006-201ENST00000333319 NEURL1BA8MQ27 555 aa24.74■■□□□ 1.55
LINC01006-201ENST00000333319 GPT2Q8TD30 523 aa24.74■■□□□ 1.55
LINC01006-201ENST00000333319 CYP27B1O15528 508 aa24.73■■□□□ 1.55
LINC01006-201ENST00000333319 MYD88Q99836 296 aa24.73■■□□□ 1.55
LINC01006-201ENST00000333319 USP16Q9Y5T5 823 aa24.73■■□□□ 1.55
LINC01006-201ENST00000333319 ZSCAN23Q3MJ62 389 aa24.73■■□□□ 1.55
LINC01006-201ENST00000333319 TTC5Q8N0Z6 440 aa24.73■■□□□ 1.55
LINC01006-201ENST00000333319 EAF2Q96CJ1 260 aaPredicted RBP24.73■■□□□ 1.55
LINC01006-201ENST00000333319 DCAF5Q96JK2 942 aa24.73■■□□□ 1.55
LINC01006-201ENST00000333319 SIL1Q9H173 461 aa24.73■■□□□ 1.55
LINC01006-201ENST00000333319 DCCP43146 1447 aa24.72■■□□□ 1.55
LINC01006-201ENST00000333319 EVI5LQ96CN4 794 aa24.72■■□□□ 1.55
LINC01006-201ENST00000333319 METTL22Q9BUU2 404 aaPredicted RBP24.72■■□□□ 1.55
LINC01006-201ENST00000333319 STRCP1A6NGW2 1772 aa24.72■■□□□ 1.55
LINC01006-201ENST00000333319 ZNF445P59923 1031 aa24.72■■□□□ 1.55
LINC01006-201ENST00000333319 GCKRQ14397 625 aa24.72■■□□□ 1.55
LINC01006-201ENST00000333319 CCDC8Q9H0W5 538 aaPredicted RBP24.72■■□□□ 1.55
LINC01006-201ENST00000333319 SNRPA1P09661 255 aaKnown RBP24.71■■□□□ 1.55
LINC01006-201ENST00000333319 PIP4K2AP48426 406 aaPredicted RBP24.71■■□□□ 1.55
LINC01006-201ENST00000333319 TTC14Q96N46 770 aa24.71■■□□□ 1.55
LINC01006-201ENST00000333319 TNS3Q68CZ2 1445 aa24.71■■□□□ 1.55
LINC01006-201ENST00000333319 PTH1RQ03431 593 aa24.7■■□□□ 1.55
LINC01006-201ENST00000333319 ANKRD13DQ6ZTN6 518 aa24.7■■□□□ 1.55
LINC01006-201ENST00000333319 CADPS2Q86UW7 1296 aa24.7■■□□□ 1.55
LINC01006-201ENST00000333319 KLHDC4Q8TBB5 520 aa24.7■■□□□ 1.54
LINC01006-201ENST00000333319 AK2P54819 239 aa24.69■■□□□ 1.54
LINC01006-201ENST00000333319 EPHA10Q5JZY3 1008 aa24.69■■□□□ 1.54
LINC01006-201ENST00000333319 LRP10Q7Z4F1 713 aa24.69■■□□□ 1.54
LINC01006-201ENST00000333319 RBM27Q9P2N5 1060 aaKnown RBP24.69■■□□□ 1.54
LINC01006-201ENST00000333319 NASPP49321 788 aaPredicted RBP24.68■■□□□ 1.54
LINC01006-201ENST00000333319 FMNL2Q96PY5 1086 aa24.68■■□□□ 1.54
LINC01006-201ENST00000333319 TLR7Q9NYK1 1049 aaKnown RBP24.68■■□□□ 1.54
LINC01006-201ENST00000333319 LARP6Q9BRS8 491 aaKnown RBP24.68■■□□□ 1.54
LINC01006-201ENST00000333319 ABCC6O95255 1503 aa24.67■■□□□ 1.54
LINC01006-201ENST00000333319 CASTP20810 708 aaKnown RBP24.67■■□□□ 1.54
LINC01006-201ENST00000333319 SPATA31A3Q5VYP0 1347 aa24.67■■□□□ 1.54
LINC01006-201ENST00000333319 CPA1P15085 419 aa24.66■■□□□ 1.54
LINC01006-201ENST00000333319 CABP4P57796 275 aa24.66■■□□□ 1.54
LINC01006-201ENST00000333319 PRPF40BQ6NWY9 871 aaKnown RBP24.66■■□□□ 1.54
LINC01006-201ENST00000333319 JARID2Q92833 1246 aaPredicted RBP24.66■■□□□ 1.54
LINC01006-201ENST00000333319 NSFL1CQ9UNZ2 370 aaKnown RBP24.66■■□□□ 1.54
LINC01006-201ENST00000333319 RUFY3Q7L099 469 aa24.66■■□□□ 1.54
LINC01006-201ENST00000333319 LIMCH1Q9UPQ0 1083 aa24.66■■□□□ 1.54
LINC01006-201ENST00000333319 MRC1P22897 1456 aa24.66■■□□□ 1.54
LINC01006-201ENST00000333319 BOLA2Q9H3K6 86 aa24.65■■□□□ 1.54
LINC01006-201ENST00000333319 WDR33Q9C0J8 1336 aaKnown RBP24.65■■□□□ 1.54
LINC01006-201ENST00000333319 FOXD4L6Q3SYB3 417 aaPredicted RBP24.64■■□□□ 1.54
LINC01006-201ENST00000333319 FOXD4L3Q6VB84 417 aaPredicted RBP24.64■■□□□ 1.54
LINC01006-201ENST00000333319 FAM227BQ96M60 508 aa24.64■■□□□ 1.54
LINC01006-201ENST00000333319 TMEM63CQ9P1W3 806 aa24.64■■□□□ 1.54
LINC01006-201ENST00000333319 TRIM44Q96DX7 344 aaPredicted RBP24.64■■□□□ 1.53
LINC01006-201ENST00000333319 HIP1O00291 1037 aa24.63■■□□□ 1.53
LINC01006-201ENST00000333319 NMIQ13287 307 aaPredicted RBP24.63■■□□□ 1.53
LINC01006-201ENST00000333319 ADCK5Q3MIX3 580 aa24.63■■□□□ 1.53
LINC01006-201ENST00000333319 JAKMIP1Q96N16 626 aaKnown RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms