RNA–Protein interactions for RNA: ENST00000328354.10

CHEK2-201, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-201ENST00000328354 PLBD2Q8NHP8 589 aa17.64■□□□□ 0.41
CHEK2-201ENST00000328354 DOT1LQ8TEK3 1739 aa17.64■□□□□ 0.41
CHEK2-201ENST00000328354 RAB11FIP3O75154 756 aa17.63■□□□□ 0.41
CHEK2-201ENST00000328354 OTUD7AQ8TE49 926 aaPredicted RBP17.63■□□□□ 0.41
CHEK2-201ENST00000328354 C8orf37Q96NL8 207 aa17.63■□□□□ 0.41
CHEK2-201ENST00000328354 APBB1O00213 710 aa17.63■□□□□ 0.41
CHEK2-201ENST00000328354 SRGAP3O43295 1099 aa17.63■□□□□ 0.41
CHEK2-201ENST00000328354 PTCD1O75127 700 aaKnown RBP17.63■□□□□ 0.41
CHEK2-201ENST00000328354 PIP4K2AP48426 406 aaPredicted RBP17.63■□□□□ 0.41
CHEK2-201ENST00000328354 GCKRQ14397 625 aa17.62■□□□□ 0.41
CHEK2-201ENST00000328354 BARGINQ6ZT62 677 aa17.62■□□□□ 0.41
CHEK2-201ENST00000328354 TEX13AQ9BXU3 409 aaPredicted RBP17.62■□□□□ 0.41
CHEK2-201ENST00000328354 ATG3Q9NT62 314 aa17.62■□□□□ 0.41
CHEK2-201ENST00000328354 COL15A1P39059 1388 aa17.62■□□□□ 0.41
CHEK2-201ENST00000328354 MYD88Q99836 296 aa17.61■□□□□ 0.41
CHEK2-201ENST00000328354 ASAP1Q9ULH1 1129 aa17.61■□□□□ 0.41
CHEK2-201ENST00000328354 HSP90AB4PQ58FF6 505 aa17.61■□□□□ 0.41
CHEK2-201ENST00000328354 POTEAQ6S8J7 498 aa17.61■□□□□ 0.41
CHEK2-201ENST00000328354 KAZALD1Q96I82 304 aa17.61■□□□□ 0.41
CHEK2-201ENST00000328354 SUCLG2Q96I99 432 aa17.61■□□□□ 0.41
CHEK2-201ENST00000328354 A1BGP04217 495 aa17.6■□□□□ 0.41
CHEK2-201ENST00000328354 PDE1AP54750 535 aa17.6■□□□□ 0.41
CHEK2-201ENST00000328354 AFF2P51816 1311 aa17.6■□□□□ 0.41
CHEK2-201ENST00000328354 CDC45O75419 566 aa17.59■□□□□ 0.41
CHEK2-201ENST00000328354 SURF6O75683 361 aaKnown RBP17.59■□□□□ 0.41
CHEK2-201ENST00000328354 TBC1D9Q6ZT07 1266 aa17.59■□□□□ 0.41
CHEK2-201ENST00000328354 NGLY1Q96IV0 654 aa17.59■□□□□ 0.41
CHEK2-201ENST00000328354 MFAP1P55081 439 aaKnown RBP17.58■□□□□ 0.41
CHEK2-201ENST00000328354 DDB1Q16531 1140 aa17.58■□□□□ 0.41
CHEK2-201ENST00000328354 STAP2Q9UGK3 403 aa17.58■□□□□ 0.41
CHEK2-201ENST00000328354 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.58■□□□□ 0.41
CHEK2-201ENST00000328354 ERICH6Q7L0X2 663 aa17.58■□□□□ 0.4
CHEK2-201ENST00000328354 KIF1BPQ96EK5 621 aa17.58■□□□□ 0.4
CHEK2-201ENST00000328354 AOX1Q06278 1338 aa17.58■□□□□ 0.4
CHEK2-201ENST00000328354 EIF5BO60841 1220 aaKnown RBP17.57■□□□□ 0.4
CHEK2-201ENST00000328354 TJP1Q07157 1748 aa17.57■□□□□ 0.4
CHEK2-201ENST00000328354 UNC5CLQ8IV45 518 aa17.57■□□□□ 0.4
CHEK2-201ENST00000328354 RHPN1Q8TCX5 695 aa17.57■□□□□ 0.4
CHEK2-201ENST00000328354 C22orf23Q9BZE7 217 aa17.57■□□□□ 0.4
CHEK2-201ENST00000328354 MX1P20591 662 aa17.56■□□□□ 0.4
CHEK2-201ENST00000328354 TTLL7Q6ZT98 887 aa17.56■□□□□ 0.4
CHEK2-201ENST00000328354 BICC1Q9H694 974 aaKnown RBP17.56■□□□□ 0.4
CHEK2-201ENST00000328354 SDSP20132 328 aa17.56■□□□□ 0.4
CHEK2-201ENST00000328354 DNAJC10Q8IXB1 793 aa17.56■□□□□ 0.4
CHEK2-201ENST00000328354 BCL9LQ86UU0 1499 aa17.56■□□□□ 0.4
CHEK2-201ENST00000328354 CICQ96RK0 1608 aaPredicted RBP17.55■□□□□ 0.4
CHEK2-201ENST00000328354 STARD3NLO95772 234 aa17.55■□□□□ 0.4
CHEK2-201ENST00000328354 RBM25P49756 843 aaKnown RBP17.55■□□□□ 0.4
CHEK2-201ENST00000328354 PRIM1P49642 420 aaKnown RBP17.54■□□□□ 0.4
CHEK2-201ENST00000328354 CASP7P55210 303 aa17.54■□□□□ 0.4
CHEK2-201ENST00000328354 VPS72Q15906 364 aa17.54■□□□□ 0.4
CHEK2-201ENST00000328354 ERC1Q8IUD2 1116 aa17.54■□□□□ 0.4
CHEK2-201ENST00000328354 MARCH10Q8NA82 808 aaPredicted RBP17.54■□□□□ 0.4
CHEK2-201ENST00000328354 SLC4A9Q96Q91 983 aa17.54■□□□□ 0.4
CHEK2-201ENST00000328354 RABL6Q3YEC7 729 aaPredicted RBP17.53■□□□□ 0.4
CHEK2-201ENST00000328354 ZNF772Q68DY9 489 aaPredicted RBP17.53■□□□□ 0.4
CHEK2-201ENST00000328354 FNBP4Q8N3X1 1017 aaPredicted RBP17.53■□□□□ 0.4
CHEK2-201ENST00000328354 RBM42Q9BTD8 480 aaKnown RBP17.53■□□□□ 0.4
CHEK2-201ENST00000328354 BCL11AQ9H165 835 aa17.53■□□□□ 0.4
CHEK2-201ENST00000328354 IL1RAPL2Q9NP60 686 aa17.53■□□□□ 0.4
CHEK2-201ENST00000328354 ATP5J2-PTCD1G3V325 749 aa17.52■□□□□ 0.4
CHEK2-201ENST00000328354 H7C1W4 665 aa17.52■□□□□ 0.4
CHEK2-201ENST00000328354 A0A087WZG4 1122 aa17.52■□□□□ 0.39
CHEK2-201ENST00000328354 CYP19A1P11511 503 aaPredicted RBP17.52■□□□□ 0.39
CHEK2-201ENST00000328354 EPHA10Q5JZY3 1008 aa17.52■□□□□ 0.39
CHEK2-201ENST00000328354 CCDC191Q8NCU4 936 aa17.52■□□□□ 0.39
CHEK2-201ENST00000328354 USP21Q9UK80 565 aa17.52■□□□□ 0.39
CHEK2-201ENST00000328354 CCDC9Q9Y3X0 531 aaKnown RBP17.52■□□□□ 0.39
CHEK2-201ENST00000328354 USP42Q9H9J4 1324 aaKnown RBP17.52■□□□□ 0.39
CHEK2-201ENST00000328354 AK9Q5TCS8 1911 aa17.52■□□□□ 0.39
CHEK2-201ENST00000328354 UBE3BQ7Z3V4 1068 aa17.51■□□□□ 0.39
CHEK2-201ENST00000328354 SYTL4Q96C24 671 aaPredicted RBP17.51■□□□□ 0.39
CHEK2-201ENST00000328354 CWC25Q9NXE8 425 aaPredicted RBP17.51■□□□□ 0.39
CHEK2-201ENST00000328354 ANP32EQ9BTT0 268 aa17.5■□□□□ 0.39
CHEK2-201ENST00000328354 PA2G4Q9UQ80 394 aaKnown RBP17.5■□□□□ 0.39
CHEK2-201ENST00000328354 RREB1Q92766 1687 aa17.5■□□□□ 0.39
CHEK2-201ENST00000328354 TRIM28Q13263 835 aaKnown RBP17.5■□□□□ 0.39
CHEK2-201ENST00000328354 OS9Q13438 667 aaPredicted RBP17.5■□□□□ 0.39
CHEK2-201ENST00000328354 CASC1Q6TDU7 716 aa17.5■□□□□ 0.39
CHEK2-201ENST00000328354 ISCA1Q9BUE6 129 aa17.5■□□□□ 0.39
CHEK2-201ENST00000328354 ZBTB3Q9H5J0 574 aa17.5■□□□□ 0.39
CHEK2-201ENST00000328354 QTRT2Q9H974 415 aaKnown RBP17.5■□□□□ 0.39
CHEK2-201ENST00000328354 DAXXQ9UER7 740 aaPredicted RBP17.5■□□□□ 0.39
CHEK2-201ENST00000328354 ANKRD36CQ5JPF3 1778 aa17.5■□□□□ 0.39
CHEK2-201ENST00000328354 ZNF831Q5JPB2 1677 aa17.49■□□□□ 0.39
CHEK2-201ENST00000328354 BECN1Q14457 450 aa17.49■□□□□ 0.39
CHEK2-201ENST00000328354 RFX5P48382 616 aaPredicted RBP17.48■□□□□ 0.39
CHEK2-201ENST00000328354 TCIRG1Q13488 830 aa17.48■□□□□ 0.39
CHEK2-201ENST00000328354 TSHZ3Q63HK5 1081 aa17.48■□□□□ 0.39
CHEK2-201ENST00000328354 NUTM1Q86Y26 1132 aa17.48■□□□□ 0.39
CHEK2-201ENST00000328354 CLASRPQ8N2M8 674 aaKnown RBP17.48■□□□□ 0.39
CHEK2-201ENST00000328354 PI4K2BQ8TCG2 481 aa17.48■□□□□ 0.39
CHEK2-201ENST00000328354 COPRSQ9NQ92 184 aa17.48■□□□□ 0.39
CHEK2-201ENST00000328354 THSD7AQ9UPZ6 1657 aa17.48■□□□□ 0.39
CHEK2-201ENST00000328354 TTC41PQ6P2S7 1318 aa17.48■□□□□ 0.39
CHEK2-201ENST00000328354 G3BP1Q13283 466 aaKnown RBP eCLIP17.48■□□□□ 0.39
CHEK2-201ENST00000328354 KIF6Q6ZMV9 814 aa17.48■□□□□ 0.39
CHEK2-201ENST00000328354 NUP98P52948 1817 aa17.47■□□□□ 0.39
CHEK2-201ENST00000328354 MAP3K15Q6ZN16 1313 aa17.47■□□□□ 0.39
CHEK2-201ENST00000328354 SASH1O94885 1247 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms