RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 POLR3GO15318 223 aaPredicted RBP15.4■□□□□ 0.06
TRAK1-201ENST00000327628 GNAQP50148 359 aa15.4■□□□□ 0.06
TRAK1-201ENST00000327628 CABP5Q9NP86 173 aa15.4■□□□□ 0.06
TRAK1-201ENST00000327628 ANAPC15P60006 121 aa15.4■□□□□ 0.06
TRAK1-201ENST00000327628 TUBB4BP68371 445 aa15.4■□□□□ 0.06
TRAK1-201ENST00000327628 PTPN14Q15678 1187 aa15.4■□□□□ 0.06
TRAK1-201ENST00000327628 CASQ1P31415 396 aa15.4■□□□□ 0.06
TRAK1-201ENST00000327628 ERMNQ8TAM6 284 aa15.4■□□□□ 0.06
TRAK1-201ENST00000327628 PLVAPQ9BX97 442 aa15.4■□□□□ 0.06
TRAK1-201ENST00000327628 ABCF2Q9UG63 623 aa15.4■□□□□ 0.06
TRAK1-201ENST00000327628 STX1AQ16623 288 aa15.39■□□□□ 0.05
TRAK1-201ENST00000327628 GIGYF2Q6Y7W6 1299 aaKnown RBP15.39■□□□□ 0.05
TRAK1-201ENST00000327628 CNNM2Q9H8M5 875 aa15.39■□□□□ 0.05
TRAK1-201ENST00000327628 CWC25Q9NXE8 425 aaPredicted RBP15.39■□□□□ 0.05
TRAK1-201ENST00000327628 CDK13Q14004 1512 aaKnown RBP15.39■□□□□ 0.05
TRAK1-201ENST00000327628 B4DLN1 442 aa15.39■□□□□ 0.05
TRAK1-201ENST00000327628 MRPL12P52815 198 aaKnown RBP15.39■□□□□ 0.05
TRAK1-201ENST00000327628 FMNL3Q8IVF7 1028 aa15.39■□□□□ 0.05
TRAK1-201ENST00000327628 LRRFIP2Q9Y608 721 aaKnown RBP15.39■□□□□ 0.05
TRAK1-201ENST00000327628 EXOC5O00471 708 aa15.39■□□□□ 0.05
TRAK1-201ENST00000327628 BMP2KLQ5H9B9 411 aa15.39■□□□□ 0.05
TRAK1-201ENST00000327628 IL1RAPL2Q9NP60 686 aa15.39■□□□□ 0.05
TRAK1-201ENST00000327628 ANKIB1Q9P2G1 1089 aa15.39■□□□□ 0.05
TRAK1-201ENST00000327628 TRMT112Q9UI30 125 aaKnown RBP15.39■□□□□ 0.05
TRAK1-201ENST00000327628 KDM4AO75164 1064 aa15.38■□□□□ 0.05
TRAK1-201ENST00000327628 NF2P35240 595 aa15.38■□□□□ 0.05
TRAK1-201ENST00000327628 PRPF40BQ6NWY9 871 aaKnown RBP15.38■□□□□ 0.05
TRAK1-201ENST00000327628 KRT23Q9C075 422 aa15.38■□□□□ 0.05
TRAK1-201ENST00000327628 CGNQ9P2M7 1197 aaKnown RBP15.38■□□□□ 0.05
TRAK1-201ENST00000327628 PRPHP41219 470 aa15.38■□□□□ 0.05
TRAK1-201ENST00000327628 CADPS2Q86UW7 1296 aa15.38■□□□□ 0.05
TRAK1-201ENST00000327628 TTC12Q9H892 705 aaPredicted RBP15.38■□□□□ 0.05
TRAK1-201ENST00000327628 SPAG1Q07617 926 aa15.38■□□□□ 0.05
TRAK1-201ENST00000327628 SMARCC1Q92922 1105 aaPredicted RBP15.38■□□□□ 0.05
TRAK1-201ENST00000327628 NLRP5P59047 1200 aa15.37■□□□□ 0.05
TRAK1-201ENST00000327628 NESP48681 1621 aa15.37■□□□□ 0.05
TRAK1-201ENST00000327628 CCDC96Q2M329 555 aa15.37■□□□□ 0.05
TRAK1-201ENST00000327628 TAX1BP1Q86VP1 789 aa15.37■□□□□ 0.05
TRAK1-201ENST00000327628 EIF2AK4Q9P2K8 1649 aaKnown RBP15.37■□□□□ 0.05
TRAK1-201ENST00000327628 CTAGE1Q96RT6 745 aa15.37■□□□□ 0.05
TRAK1-201ENST00000327628 ESPNB1AK53 854 aa15.37■□□□□ 0.05
TRAK1-201ENST00000327628 ALDH1L1O75891 902 aa15.37■□□□□ 0.05
TRAK1-201ENST00000327628 RAPGEF3O95398 923 aa15.37■□□□□ 0.05
TRAK1-201ENST00000327628 NCOA7Q8NI08 942 aa15.37■□□□□ 0.05
TRAK1-201ENST00000327628 CRNKL1Q9BZJ0 848 aaKnown RBP15.37■□□□□ 0.05
TRAK1-201ENST00000327628 FERMT2Q96AC1 680 aa15.37■□□□□ 0.05
TRAK1-201ENST00000327628 SCLT1Q96NL6 688 aa15.37■□□□□ 0.05
TRAK1-201ENST00000327628 IFIT3O14879 490 aaKnown RBP15.36■□□□□ 0.05
TRAK1-201ENST00000327628 MAP4K4O95819 1239 aaPredicted RBP15.36■□□□□ 0.05
TRAK1-201ENST00000327628 NBPF7P0C2Y1 421 aaPredicted RBP15.36■□□□□ 0.05
TRAK1-201ENST00000327628 LUZP1Q86V48 1076 aa15.36■□□□□ 0.05
TRAK1-201ENST00000327628 NUTM1Q86Y26 1132 aa15.36■□□□□ 0.05
TRAK1-201ENST00000327628 BBXQ8WY36 941 aaPredicted RBP15.36■□□□□ 0.05
TRAK1-201ENST00000327628 C14orf93Q9H972 538 aaKnown RBP15.36■□□□□ 0.05
TRAK1-201ENST00000327628 RPRD2Q5VT52 1461 aaKnown RBP15.36■□□□□ 0.05
TRAK1-201ENST00000327628 ST5P78524 1137 aa15.36■□□□□ 0.05
TRAK1-201ENST00000327628 CNNM3Q8NE01 707 aa15.36■□□□□ 0.05
TRAK1-201ENST00000327628 NAP1L4Q99733 375 aaKnown RBP15.36■□□□□ 0.05
TRAK1-201ENST00000327628 DDX46Q7L014 1031 aaKnown RBP15.36■□□□□ 0.05
TRAK1-201ENST00000327628 CCDC102AQ96A19 550 aa15.36■□□□□ 0.05
TRAK1-201ENST00000327628 MYO1BO43795 1136 aa15.36■□□□□ 0.05
TRAK1-201ENST00000327628 RRP9O43818 475 aaKnown RBP15.36■□□□□ 0.05
TRAK1-201ENST00000327628 SNRPA1P09661 255 aaKnown RBP15.36■□□□□ 0.05
TRAK1-201ENST00000327628 KIF4AO95239 1232 aa15.35■□□□□ 0.05
TRAK1-201ENST00000327628 UQCRHLA0A096LP55 91 aa15.35■□□□□ 0.05
TRAK1-201ENST00000327628 UQCRHP07919 91 aa15.35■□□□□ 0.05
TRAK1-201ENST00000327628 MAP2K1Q02750 393 aaPredicted RBP15.35■□□□□ 0.05
TRAK1-201ENST00000327628 PPM1EQ8WY54 764 aa15.35■□□□□ 0.05
TRAK1-201ENST00000327628 KAT14Q9H8E8 782 aa15.35■□□□□ 0.05
TRAK1-201ENST00000327628 CCDC152Q4G0S7 254 aa15.35■□□□□ 0.05
TRAK1-201ENST00000327628 DUOX2Q9NRD8 1548 aa15.35■□□□□ 0.05
TRAK1-201ENST00000327628 ITSN2Q9NZM3 1697 aa15.35■□□□□ 0.05
TRAK1-201ENST00000327628 IARSP41252 1262 aaKnown RBP15.35■□□□□ 0.05
TRAK1-201ENST00000327628 SSR1P43307 286 aaKnown RBP15.34■□□□□ 0.05
TRAK1-201ENST00000327628 FLIIQ13045 1269 aa15.34■□□□□ 0.05
TRAK1-201ENST00000327628 MINDY4BA8MYZ0 360 aa15.34■□□□□ 0.05
TRAK1-201ENST00000327628 EXOC6BQ9Y2D4 811 aa15.34■□□□□ 0.05
TRAK1-201ENST00000327628 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.34■□□□□ 0.053e-7■■□□□ 13.2
TRAK1-201ENST00000327628 CALM1P0DP23 149 aa15.34■□□□□ 0.05
TRAK1-201ENST00000327628 CALM2P0DP24 149 aa15.34■□□□□ 0.05
TRAK1-201ENST00000327628 CALM3P0DP25 149 aa15.34■□□□□ 0.05
TRAK1-201ENST00000327628 DYDC1Q8WWB3 177 aa15.34■□□□□ 0.05
TRAK1-201ENST00000327628 SSH1Q8WYL5 1049 aa15.34■□□□□ 0.05
TRAK1-201ENST00000327628 PPP1R1BQ9UD71 204 aaPredicted RBP15.34■□□□□ 0.05
TRAK1-201ENST00000327628 AMOTL2Q9Y2J4 779 aa15.34■□□□□ 0.05
TRAK1-201ENST00000327628 CKAP4Q07065 602 aaKnown RBP15.34■□□□□ 0.05
TRAK1-201ENST00000327628 ANKRD24Q8TF21 1146 aa15.34■□□□□ 0.05
TRAK1-201ENST00000327628 SREK1Q8WXA9 508 aaKnown RBP15.34■□□□□ 0.05
TRAK1-201ENST00000327628 FBXO3Q9UK99 471 aa15.34■□□□□ 0.05
TRAK1-201ENST00000327628 FANCAO15360 1455 aa15.33■□□□□ 0.04
TRAK1-201ENST00000327628 GNAT2P19087 354 aa15.33■□□□□ 0.04
TRAK1-201ENST00000327628 ZC3H6P61129 1189 aaKnown RBP15.33■□□□□ 0.04
TRAK1-201ENST00000327628 WDR97A6NE52 1622 aa15.33■□□□□ 0.04
TRAK1-201ENST00000327628 RANBP6O60518 1105 aaKnown RBP15.33■□□□□ 0.04
TRAK1-201ENST00000327628 HDAC9Q9UKV0 1011 aa15.33■□□□□ 0.04
TRAK1-201ENST00000327628 TNRQ92752 1358 aa15.33■□□□□ 0.04
TRAK1-201ENST00000327628 SKIDA1Q1XH10 827 aa15.32■□□□□ 0.04
TRAK1-201ENST00000327628 KIF4BQ2VIQ3 1234 aa15.32■□□□□ 0.04
TRAK1-201ENST00000327628 MFSD6Q6ZSS7 791 aa15.32■□□□□ 0.04
TRAK1-201ENST00000327628 BOLA2Q9H3K6 86 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms