RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 SUCLG2Q96I99 432 aa26.06■■□□□ 1.76
LIMS2-201ENST00000324938 ZNF496Q96IT1 587 aaPredicted RBP26.06■■□□□ 1.76
LIMS2-201ENST00000324938 IL25Q9H293 177 aa26.06■■□□□ 1.76
LIMS2-201ENST00000324938 GLRX3O76003 335 aaKnown RBP26.06■■□□□ 1.76
LIMS2-201ENST00000324938 KAZALD1Q96I82 304 aa26.06■■□□□ 1.76
LIMS2-201ENST00000324938 BAG4O95429 457 aaKnown RBP26.05■■□□□ 1.76
LIMS2-201ENST00000324938 MAP4K4O95819 1239 aaPredicted RBP26.05■■□□□ 1.76
LIMS2-201ENST00000324938 IGKV5-2P06315 115 aa26.05■■□□□ 1.76
LIMS2-201ENST00000324938 RIC3Q7Z5B4 369 aa26.05■■□□□ 1.76
LIMS2-201ENST00000324938 GOLGA6L22H0YM25 854 aa26.05■■□□□ 1.76
LIMS2-201ENST00000324938 SGSM2O43147 1006 aa26.04■■□□□ 1.76
LIMS2-201ENST00000324938 ZGPATQ8N5A5 531 aaKnown RBP26.04■■□□□ 1.76
LIMS2-201ENST00000324938 PA2G4Q9UQ80 394 aaKnown RBP26.04■■□□□ 1.76
LIMS2-201ENST00000324938 SNRPA1P09661 255 aaKnown RBP26.03■■□□□ 1.76
LIMS2-201ENST00000324938 HSPA2P54652 639 aa26.03■■□□□ 1.76
LIMS2-201ENST00000324938 TTC5Q8N0Z6 440 aa26.03■■□□□ 1.76
LIMS2-201ENST00000324938 XAGE3Q8WTP9 111 aa26.03■■□□□ 1.76
LIMS2-201ENST00000324938 BICC1Q9H694 974 aaKnown RBP26.03■■□□□ 1.76
LIMS2-201ENST00000324938 MYL6BP14649 208 aa26.03■■□□□ 1.76
LIMS2-201ENST00000324938 HSPA4P34932 840 aa26.03■■□□□ 1.76
LIMS2-201ENST00000324938 NEXNQ0ZGT2 675 aa26.03■■□□□ 1.76
LIMS2-201ENST00000324938 ABCA3Q99758 1704 aa26.03■■□□□ 1.76
LIMS2-201ENST00000324938 RAD50Q92878 1312 aa26.03■■□□□ 1.76
LIMS2-201ENST00000324938 NEURL1BA8MQ27 555 aa26.02■■□□□ 1.76
LIMS2-201ENST00000324938 BRINP3Q76B58 766 aa26.02■■□□□ 1.76
LIMS2-201ENST00000324938 LRP10Q7Z4F1 713 aa26.02■■□□□ 1.76
LIMS2-201ENST00000324938 TMX3Q96JJ7 454 aa26.02■■□□□ 1.76
LIMS2-201ENST00000324938 FMNL2Q96PY5 1086 aa26.02■■□□□ 1.76
LIMS2-201ENST00000324938 METTL22Q9BUU2 404 aaPredicted RBP26.02■■□□□ 1.76
LIMS2-201ENST00000324938 ECHDC1Q9NTX5 307 aa26.02■■□□□ 1.76
LIMS2-201ENST00000324938 STRCQ7RTU9 1775 aa26.01■■□□□ 1.76
LIMS2-201ENST00000324938 COPS6Q7L5N1 327 aa26.01■■□□□ 1.75
LIMS2-201ENST00000324938 UBR2Q8IWV8 1755 aa26.01■■□□□ 1.75
LIMS2-201ENST00000324938 GPATCH3Q96I76 525 aa26.01■■□□□ 1.75
LIMS2-201ENST00000324938 DNAJC5Q9H3Z4 198 aa26.01■■□□□ 1.75
LIMS2-201ENST00000324938 ISY1Q9ULR0 285 aaKnown RBP26.01■■□□□ 1.75
LIMS2-201ENST00000324938 CUL4AQ13619 759 aa26■■□□□ 1.75
LIMS2-201ENST00000324938 IFIT2P09913 472 aaKnown RBP25.99■■□□□ 1.75
LIMS2-201ENST00000324938 PKP1Q13835 747 aa25.99■■□□□ 1.75
LIMS2-201ENST00000324938 GCKRQ14397 625 aa25.99■■□□□ 1.75
LIMS2-201ENST00000324938 USP16Q9Y5T5 823 aa25.99■■□□□ 1.75
LIMS2-201ENST00000324938 LSG1Q9H089 658 aaKnown RBP25.98■■□□□ 1.75
LIMS2-201ENST00000324938 XRCC6P12956 609 aaKnown RBP eCLIP25.97■■□□□ 1.75
LIMS2-201ENST00000324938 CABP4P57796 275 aa25.97■■□□□ 1.75
LIMS2-201ENST00000324938 MYD88Q99836 296 aa25.97■■□□□ 1.75
LIMS2-201ENST00000324938 PAPPAQ13219 1627 aa25.97■■□□□ 1.75
LIMS2-201ENST00000324938 WDR17Q8IZU2 1322 aa25.97■■□□□ 1.75
LIMS2-201ENST00000324938 SASH1O94885 1247 aa25.97■■□□□ 1.75
LIMS2-201ENST00000324938 G3BP1Q13283 466 aaKnown RBP eCLIP25.97■■□□□ 1.75
LIMS2-201ENST00000324938 ANKRD13DQ6ZTN6 518 aa25.97■■□□□ 1.75
LIMS2-201ENST00000324938 AACSQ86V21 672 aa25.96■■□□□ 1.75
LIMS2-201ENST00000324938 SHANK3Q9BYB0 1731 aa25.96■■□□□ 1.75
LIMS2-201ENST00000324938 INTS4Q96HW7 963 aaKnown RBP25.96■■□□□ 1.75
LIMS2-201ENST00000324938 ZDHHC9Q9Y397 364 aa25.96■■□□□ 1.75
LIMS2-201ENST00000324938 COL5A2P05997 1499 aaPredicted RBP25.95■■□□□ 1.75
LIMS2-201ENST00000324938 MRE11P49959 708 aa25.95■■□□□ 1.74
LIMS2-201ENST00000324938 COL15A1P39059 1388 aa25.95■■□□□ 1.74
LIMS2-201ENST00000324938 SOS2Q07890 1332 aaPredicted RBP25.95■■□□□ 1.74
LIMS2-201ENST00000324938 KLHL40Q2TBA0 621 aa25.94■■□□□ 1.74
LIMS2-201ENST00000324938 RUFY2Q8WXA3 655 aa25.94■■□□□ 1.74
LIMS2-201ENST00000324938 PCDH11XQ9BZA7 1347 aa25.94■■□□□ 1.74
LIMS2-201ENST00000324938 PCDH11YQ9BZA8 1340 aa25.94■■□□□ 1.74
LIMS2-201ENST00000324938 CWC27Q6UX04 472 aaKnown RBP25.94■■□□□ 1.74
LIMS2-201ENST00000324938 UPF3BQ9BZI7 483 aaKnown RBP25.94■■□□□ 1.74
LIMS2-201ENST00000324938 PRDM11Q9NQV5 511 aa25.94■■□□□ 1.74
LIMS2-201ENST00000324938 DIAPH3Q9NSV4 1193 aa25.94■■□□□ 1.74
LIMS2-201ENST00000324938 NUP188Q5SRE5 1749 aa25.93■■□□□ 1.74
LIMS2-201ENST00000324938 KIAA1211Q6ZU35 1233 aa25.93■■□□□ 1.74
LIMS2-201ENST00000324938 EVI5LQ96CN4 794 aa25.93■■□□□ 1.74
LIMS2-201ENST00000324938 MCTP1Q6DN14 999 aa25.93■■□□□ 1.74
LIMS2-201ENST00000324938 EAF2Q96CJ1 260 aaPredicted RBP25.93■■□□□ 1.74
LIMS2-201ENST00000324938 ARXQ96QS3 562 aa25.92■■□□□ 1.74
LIMS2-201ENST00000324938 SNX14Q9Y5W7 946 aa25.92■■□□□ 1.74
LIMS2-201ENST00000324938 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.92■■□□□ 1.74
LIMS2-201ENST00000324938 EPHA10Q5JZY3 1008 aa25.91■■□□□ 1.74
LIMS2-201ENST00000324938 ERBB4Q15303 1308 aa25.91■■□□□ 1.74
LIMS2-201ENST00000324938 PIP4K2AP48426 406 aaPredicted RBP25.9■■□□□ 1.74
LIMS2-201ENST00000324938 DDX49Q9Y6V7 483 aaKnown RBP25.9■■□□□ 1.74
LIMS2-201ENST00000324938 ZCRB1Q8TBF4 217 aaKnown RBP25.9■■□□□ 1.74
LIMS2-201ENST00000324938 GRPEL1Q9HAV7 217 aa25.9■■□□□ 1.74
LIMS2-201ENST00000324938 KCPQ6ZWJ8 1503 aa25.89■■□□□ 1.74
LIMS2-201ENST00000324938 TOM1L2Q6ZVM7 507 aa25.89■■□□□ 1.74
LIMS2-201ENST00000324938 LMBRD1Q9NUN5 540 aa25.89■■□□□ 1.74
LIMS2-201ENST00000324938 PLBD2Q8NHP8 589 aa25.88■■□□□ 1.73
LIMS2-201ENST00000324938 SIL1Q9H173 461 aa25.88■■□□□ 1.73
LIMS2-201ENST00000324938 COPRSQ9NQ92 184 aa25.88■■□□□ 1.73
LIMS2-201ENST00000324938 RTN4Q9NQC3 1192 aaKnown RBP25.88■■□□□ 1.73
LIMS2-201ENST00000324938 NOL8Q76FK4 1167 aaKnown RBP25.88■■□□□ 1.73
LIMS2-201ENST00000324938 NHSL1Q5SYE7 1610 aa25.87■■□□□ 1.73
LIMS2-201ENST00000324938 TJP1Q07157 1748 aa25.87■■□□□ 1.73
LIMS2-201ENST00000324938 ERVV-2B6SEH9 535 aa25.87■■□□□ 1.73
LIMS2-201ENST00000324938 RABL6Q3YEC7 729 aaPredicted RBP25.87■■□□□ 1.73
LIMS2-201ENST00000324938 RASEFQ8IZ41 740 aa25.87■■□□□ 1.73
LIMS2-201ENST00000324938 TTC14Q96N46 770 aa25.87■■□□□ 1.73
LIMS2-201ENST00000324938 CCDC8Q9H0W5 538 aaPredicted RBP25.87■■□□□ 1.73
LIMS2-201ENST00000324938 SLAIN2Q9P270 581 aa25.87■■□□□ 1.73
LIMS2-201ENST00000324938 HIP1O00291 1037 aa25.87■■□□□ 1.73
LIMS2-201ENST00000324938 BRD1O95696 1058 aa25.87■■□□□ 1.73
LIMS2-201ENST00000324938 KLHDC4Q8TBB5 520 aa25.87■■□□□ 1.73
LIMS2-201ENST00000324938 RFX5P48382 616 aaPredicted RBP25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms