RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 IL25Q9H293 177 aa27.09■■□□□ 1.93
PNKP-201ENST00000322344 LARP1Q6PKG0 1096 aaKnown RBP27.09■■□□□ 1.93
PNKP-201ENST00000322344 RUFY2Q8WXA3 655 aa27.09■■□□□ 1.93
PNKP-201ENST00000322344 KIAA1211Q6ZU35 1233 aa27.08■■□□□ 1.93
PNKP-201ENST00000322344 GAS2L3Q86XJ1 694 aa27.08■■□□□ 1.93
PNKP-201ENST00000322344 IFNL2Q8IZJ0 200 aa27.08■■□□□ 1.93
PNKP-201ENST00000322344 TMEM94Q12767 1356 aa27.08■■□□□ 1.93
PNKP-201ENST00000322344 IFIT2P09913 472 aaKnown RBP27.07■■□□□ 1.92
PNKP-201ENST00000322344 LSG1Q9H089 658 aaKnown RBP27.07■■□□□ 1.92
PNKP-201ENST00000322344 COL18A1P39060 1754 aa27.06■■□□□ 1.92
PNKP-201ENST00000322344 SUCLG2Q96I99 432 aa27.06■■□□□ 1.92
PNKP-201ENST00000322344 BRD1O95696 1058 aa27.06■■□□□ 1.92
PNKP-201ENST00000322344 NEXNQ0ZGT2 675 aa27.06■■□□□ 1.92
PNKP-201ENST00000322344 RIC3Q7Z5B4 369 aa27.06■■□□□ 1.92
PNKP-201ENST00000322344 MRC1P22897 1456 aa27.05■■□□□ 1.92
PNKP-201ENST00000322344 DIAPH3Q9NSV4 1193 aa27.05■■□□□ 1.92
PNKP-201ENST00000322344 MEGF6O75095 1541 aa27.05■■□□□ 1.92
PNKP-201ENST00000322344 ZNF445P59923 1031 aa27.04■■□□□ 1.92
PNKP-201ENST00000322344 AIMP1Q12904 312 aaKnown RBP27.04■■□□□ 1.92
PNKP-201ENST00000322344 UPF3BQ9BZI7 483 aaKnown RBP27.04■■□□□ 1.92
PNKP-201ENST00000322344 TNS3Q68CZ2 1445 aa27.04■■□□□ 1.92
PNKP-201ENST00000322344 G3BP1Q13283 466 aaKnown RBP eCLIP27.04■■□□□ 1.92
PNKP-201ENST00000322344 C5P01031 1676 aa27.03■■□□□ 1.92
PNKP-201ENST00000322344 SLC39A6Q13433 755 aa27.03■■□□□ 1.92
PNKP-201ENST00000322344 KAZALD1Q96I82 304 aa27.03■■□□□ 1.92
PNKP-201ENST00000322344 DCAF5Q96JK2 942 aa27.03■■□□□ 1.92
PNKP-201ENST00000322344 PA2G4Q9UQ80 394 aaKnown RBP27.03■■□□□ 1.92
PNKP-201ENST00000322344 SNX14Q9Y5W7 946 aa27.03■■□□□ 1.92
PNKP-201ENST00000322344 CSB-PGBD3P0DP91 1061 aa27.02■■□□□ 1.92
PNKP-201ENST00000322344 CADPS2Q86UW7 1296 aa27.02■■□□□ 1.92
PNKP-201ENST00000322344 NFATC2IPQ8NCF5 419 aa27.02■■□□□ 1.92
PNKP-201ENST00000322344 EVI5LQ96CN4 794 aa27.02■■□□□ 1.92
PNKP-201ENST00000322344 BICC1Q9H694 974 aaKnown RBP27.02■■□□□ 1.92
PNKP-201ENST00000322344 IGKV5-2P06315 115 aa27.02■■□□□ 1.92
PNKP-201ENST00000322344 CWC27Q6UX04 472 aaKnown RBP27.02■■□□□ 1.92
PNKP-201ENST00000322344 AACSQ86V21 672 aa27.01■■□□□ 1.91
PNKP-201ENST00000322344 PRPF40AO75400 957 aaKnown RBP27■■□□□ 1.91
PNKP-201ENST00000322344 METTL22Q9BUU2 404 aaPredicted RBP27■■□□□ 1.91
PNKP-201ENST00000322344 NEURL1BA8MQ27 555 aa27■■□□□ 1.91
PNKP-201ENST00000322344 HIP1O00291 1037 aa27■■□□□ 1.91
PNKP-201ENST00000322344 SNRPA1P09661 255 aaKnown RBP27■■□□□ 1.91
PNKP-201ENST00000322344 TTC5Q8N0Z6 440 aa27■■□□□ 1.91
PNKP-201ENST00000322344 XAGE3Q8WTP9 111 aa26.99■■□□□ 1.91
PNKP-201ENST00000322344 NCLP19338 710 aaKnown RBP26.99■■□□□ 1.91
PNKP-201ENST00000322344 NOL8Q76FK4 1167 aaKnown RBP26.99■■□□□ 1.91
PNKP-201ENST00000322344 ZNF496Q96IT1 587 aaPredicted RBP26.99■■□□□ 1.91
PNKP-201ENST00000322344 CPDO75976 1380 aa26.99■■□□□ 1.91
PNKP-201ENST00000322344 PKD1L3Q7Z443 1732 aa26.98■■□□□ 1.91
PNKP-201ENST00000322344 SASH1O94885 1247 aa26.98■■□□□ 1.91
PNKP-201ENST00000322344 GCKRQ14397 625 aa26.98■■□□□ 1.91
PNKP-201ENST00000322344 CAVIN1Q6NZI2 390 aaKnown RBP26.98■■□□□ 1.91
PNKP-201ENST00000322344 TTC14Q96N46 770 aa26.98■■□□□ 1.91
PNKP-201ENST00000322344 MBD3O95983 291 aa26.97■■□□□ 1.91
PNKP-201ENST00000322344 ZSCAN23Q3MJ62 389 aa26.97■■□□□ 1.91
PNKP-201ENST00000322344 COPS6Q7L5N1 327 aa26.97■■□□□ 1.91
PNKP-201ENST00000322344 FMNL2Q96PY5 1086 aa26.97■■□□□ 1.91
PNKP-201ENST00000322344 MYL6BP14649 208 aa26.97■■□□□ 1.91
PNKP-201ENST00000322344 DDX17Q92841 729 aaKnown RBP26.96■■□□□ 1.91
PNKP-201ENST00000322344 RRAGDQ9NQL2 400 aaPredicted RBP26.96■■□□□ 1.91
PNKP-201ENST00000322344 STRCP1A6NGW2 1772 aa26.96■■□□□ 1.91
PNKP-201ENST00000322344 SPATA31A3Q5VYP0 1347 aa26.96■■□□□ 1.91
PNKP-201ENST00000322344 WDR33Q9C0J8 1336 aaKnown RBP26.96■■□□□ 1.91
PNKP-201ENST00000322344 KCNB2Q92953 911 aa26.95■■□□□ 1.91
PNKP-201ENST00000322344 ANKRD13DQ6ZTN6 518 aa26.95■■□□□ 1.9
PNKP-201ENST00000322344 RASEFQ8IZ41 740 aa26.95■■□□□ 1.9
PNKP-201ENST00000322344 GPT2Q8TD30 523 aa26.95■■□□□ 1.9
PNKP-201ENST00000322344 MYD88Q99836 296 aa26.95■■□□□ 1.9
PNKP-201ENST00000322344 COL15A1P39059 1388 aa26.94■■□□□ 1.9
PNKP-201ENST00000322344 CYP27B1O15528 508 aa26.94■■□□□ 1.9
PNKP-201ENST00000322344 LRP10Q7Z4F1 713 aa26.94■■□□□ 1.9
PNKP-201ENST00000322344 EAF2Q96CJ1 260 aaPredicted RBP26.94■■□□□ 1.9
PNKP-201ENST00000322344 TM6SF1Q9BZW5 370 aa26.94■■□□□ 1.9
PNKP-201ENST00000322344 LIMCH1Q9UPQ0 1083 aa26.94■■□□□ 1.9
PNKP-201ENST00000322344 NASPP49321 788 aaPredicted RBP26.94■■□□□ 1.9
PNKP-201ENST00000322344 CCDC173Q0VFZ6 552 aa26.92■■□□□ 1.9
PNKP-201ENST00000322344 CABLES1Q8TDN4 633 aa26.92■■□□□ 1.9
PNKP-201ENST00000322344 ANP32BQ92688 251 aaKnown RBP26.92■■□□□ 1.9
PNKP-201ENST00000322344 AK2P54819 239 aa26.92■■□□□ 1.9
PNKP-201ENST00000322344 CHRNA2Q15822 529 aa26.92■■□□□ 1.9
PNKP-201ENST00000322344 SNRKQ9NRH2 765 aa26.92■■□□□ 1.9
PNKP-201ENST00000322344 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.92■■□□□ 1.9
PNKP-201ENST00000322344 PARP4Q9UKK3 1724 aaKnown RBP26.91■■□□□ 1.9
PNKP-201ENST00000322344 CABP4P57796 275 aa26.91■■□□□ 1.9
PNKP-201ENST00000322344 USP16Q9Y5T5 823 aa26.91■■□□□ 1.9
PNKP-201ENST00000322344 FOXD4L5Q5VV16 416 aaPredicted RBP26.9■■□□□ 1.9
PNKP-201ENST00000322344 FOXD4L4Q8WXT5 416 aaPredicted RBP26.9■■□□□ 1.9
PNKP-201ENST00000322344 COPRSQ9NQ92 184 aa26.9■■□□□ 1.9
PNKP-201ENST00000322344 CCDC171Q6TFL3 1326 aa26.9■■□□□ 1.9
PNKP-201ENST00000322344 PTH1RQ03431 593 aa26.9■■□□□ 1.9
PNKP-201ENST00000322344 TRIM44Q96DX7 344 aaPredicted RBP26.9■■□□□ 1.9
PNKP-201ENST00000322344 VPS53Q5VIR6 699 aa26.89■■□□□ 1.9
PNKP-201ENST00000322344 PPP1R9BQ96SB3 815 aa26.89■■□□□ 1.9
PNKP-201ENST00000322344 CCDC8Q9H0W5 538 aaPredicted RBP26.89■■□□□ 1.9
PNKP-201ENST00000322344 ERBB4Q15303 1308 aa26.89■■□□□ 1.89
PNKP-201ENST00000322344 CASTP20810 708 aaKnown RBP26.89■■□□□ 1.89
PNKP-201ENST00000322344 RUFY3Q7L099 469 aa26.89■■□□□ 1.89
PNKP-201ENST00000322344 ZKSCAN1P17029 563 aaPredicted RBP26.88■■□□□ 1.89
PNKP-201ENST00000322344 NECTIN1Q15223 517 aa26.88■■□□□ 1.89
PNKP-201ENST00000322344 ZSCAN31Q96LW9 406 aaPredicted RBP26.88■■□□□ 1.89
PNKP-201ENST00000322344 SIL1Q9H173 461 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms