RNA–Protein interactions for RNA: ENST00000322147.8

LTBP3-202, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBP3, Length 4,046 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-202ENST00000322147 VIRMAQ69YN4 1812 aaKnown RBP21.71■■□□□ 1.07
LTBP3-202ENST00000322147 DYNC1I1O14576 645 aa21.71■■□□□ 1.07
LTBP3-202ENST00000322147 ATP8B2P98198 1209 aa21.71■■□□□ 1.07
LTBP3-202ENST00000322147 HS1BP3Q53T59 392 aa21.71■■□□□ 1.07
LTBP3-202ENST00000322147 LMBR1LQ6UX01 489 aa21.71■■□□□ 1.07
LTBP3-202ENST00000322147 BRF1Q92994 677 aa21.71■■□□□ 1.07
LTBP3-202ENST00000322147 NPATQ14207 1427 aa21.71■■□□□ 1.07
LTBP3-202ENST00000322147 HSPA2P54652 639 aa21.71■■□□□ 1.07
LTBP3-202ENST00000322147 ZNF445P59923 1031 aa21.71■■□□□ 1.07
LTBP3-202ENST00000322147 NOC3LQ8WTT2 800 aaKnown RBP21.71■■□□□ 1.07
LTBP3-202ENST00000322147 LAMC1P11047 1609 aa21.71■■□□□ 1.07
LTBP3-202ENST00000322147 ZNF771Q7L3S4 317 aaPredicted RBP21.71■■□□□ 1.07
LTBP3-202ENST00000322147 RAI14Q9P0K7 980 aa21.71■■□□□ 1.07
LTBP3-202ENST00000322147 PPP6R1Q9UPN7 881 aa21.71■■□□□ 1.07
LTBP3-202ENST00000322147 ARHGEF5Q12774 1597 aa21.7■■□□□ 1.07
LTBP3-202ENST00000322147 NBPF7P0C2Y1 421 aaPredicted RBP21.7■■□□□ 1.06
LTBP3-202ENST00000322147 TERF1P54274 439 aa21.7■■□□□ 1.06
LTBP3-202ENST00000322147 SART3Q15020 963 aaKnown RBP21.7■■□□□ 1.06
LTBP3-202ENST00000322147 MSH6P52701 1360 aa21.7■■□□□ 1.06
LTBP3-202ENST00000322147 UHRF1BP1LA0JNW5 1464 aa21.69■■□□□ 1.06
LTBP3-202ENST00000322147 SERPINC1P01008 464 aa21.69■■□□□ 1.06
LTBP3-202ENST00000322147 MAP3K11Q16584 847 aa21.69■■□□□ 1.06
LTBP3-202ENST00000322147 HYPKQ9NX55 129 aa21.69■■□□□ 1.06
LTBP3-202ENST00000322147 TMOD3Q9NYL9 352 aa21.69■■□□□ 1.06
LTBP3-202ENST00000322147 TRMT112Q9UI30 125 aaKnown RBP21.69■■□□□ 1.06
LTBP3-202ENST00000322147 ZSCAN31Q96LW9 406 aaPredicted RBP21.69■■□□□ 1.06
LTBP3-202ENST00000322147 KCNQ3O43525 872 aa21.68■■□□□ 1.06
LTBP3-202ENST00000322147 GCP02774 474 aa21.68■■□□□ 1.06
LTBP3-202ENST00000322147 PKP1Q13835 747 aa21.68■■□□□ 1.06
LTBP3-202ENST00000322147 OLFM4Q6UX06 510 aa21.68■■□□□ 1.06
LTBP3-202ENST00000322147 USP26Q9BXU7 913 aa21.68■■□□□ 1.06
LTBP3-202ENST00000322147 RBM8AQ9Y5S9 174 aaKnown RBP21.68■■□□□ 1.06
LTBP3-202ENST00000322147 TPM1P09493 284 aa21.67■■□□□ 1.06
LTBP3-202ENST00000322147 DNM1Q05193 864 aaKnown RBP21.67■■□□□ 1.06
LTBP3-202ENST00000322147 LDHAL6AQ6ZMR3 332 aa21.67■■□□□ 1.06
LTBP3-202ENST00000322147 PHF23Q9BUL5 403 aaPredicted RBP21.67■■□□□ 1.06
LTBP3-202ENST00000322147 LMBRD1Q9NUN5 540 aa21.67■■□□□ 1.06
LTBP3-202ENST00000322147 MNS1Q8NEH6 495 aa21.67■■□□□ 1.06
LTBP3-202ENST00000322147 AIDAQ96BJ3 306 aa21.67■■□□□ 1.06
LTBP3-202ENST00000322147 ZNF396Q96N95 335 aaPredicted RBP21.67■■□□□ 1.06
LTBP3-202ENST00000322147 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.67■■□□□ 1.061e-6■■■■■ 34.2
LTBP3-202ENST00000322147 NAT10Q9H0A0 1025 aaKnown RBP21.67■■□□□ 1.06
LTBP3-202ENST00000322147 HSP90AA4PQ58FG1 418 aa21.67■■□□□ 1.06
LTBP3-202ENST00000322147 AMOTL1Q8IY63 956 aa21.67■■□□□ 1.06
LTBP3-202ENST00000322147 KIF2CQ99661 725 aa21.67■■□□□ 1.06
LTBP3-202ENST00000322147 PIK3R4Q99570 1358 aa21.67■■□□□ 1.06
LTBP3-202ENST00000322147 GRM8O00222 908 aa21.66■■□□□ 1.06
LTBP3-202ENST00000322147 IFIT5Q13325 482 aaKnown RBP21.66■■□□□ 1.06
LTBP3-202ENST00000322147 USP48Q86UV5 1035 aa21.66■■□□□ 1.06
LTBP3-202ENST00000322147 KLHL34Q8N239 644 aa21.66■■□□□ 1.06
LTBP3-202ENST00000322147 ZNF500O60304 480 aaPredicted RBP21.65■■□□□ 1.06
LTBP3-202ENST00000322147 LTKP29376 864 aa21.65■■□□□ 1.06
LTBP3-202ENST00000322147 MEX3CQ5U5Q3 659 aaKnown RBP21.65■■□□□ 1.06
LTBP3-202ENST00000322147 HELBQ8NG08 1087 aaPredicted RBP21.65■■□□□ 1.06
LTBP3-202ENST00000322147 TRMT1Q9NXH9 659 aaKnown RBP21.65■■□□□ 1.06
LTBP3-202ENST00000322147 NCOA3Q9Y6Q9 1424 aa21.65■■□□□ 1.06
LTBP3-202ENST00000322147 SKIDA1Q1XH10 827 aa21.65■■□□□ 1.06
LTBP3-202ENST00000322147 IFNL2Q8IZJ0 200 aa21.65■■□□□ 1.06
LTBP3-202ENST00000322147 HOXC9P31274 260 aa21.65■■□□□ 1.06
LTBP3-202ENST00000322147 EVI5LQ96CN4 794 aa21.65■■□□□ 1.06
LTBP3-202ENST00000322147 ZBTB9Q96C00 473 aa21.64■■□□□ 1.06
LTBP3-202ENST00000322147 SAMD9LQ8IVG5 1584 aa21.64■■□□□ 1.06
LTBP3-202ENST00000322147 ERVK-7P63135 1459 aa21.64■■□□□ 1.06
LTBP3-202ENST00000322147 CCDC69A6NI79 296 aa21.64■■□□□ 1.06
LTBP3-202ENST00000322147 CHMLP26374 656 aa21.64■■□□□ 1.06
LTBP3-202ENST00000322147 LRSAM1Q6UWE0 723 aa21.64■■□□□ 1.06
LTBP3-202ENST00000322147 EDC3Q96F86 508 aaKnown RBP21.64■■□□□ 1.06
LTBP3-202ENST00000322147 CHL1O00533 1208 aa21.64■■□□□ 1.05
LTBP3-202ENST00000322147 LETM1O95202 739 aaPredicted RBP21.64■■□□□ 1.05
LTBP3-202ENST00000322147 MICU3Q86XE3 530 aa21.64■■□□□ 1.05
LTBP3-202ENST00000322147 MCM5P33992 734 aa21.64■■□□□ 1.05
LTBP3-202ENST00000322147 IMMTQ16891 758 aaKnown RBP21.64■■□□□ 1.05
LTBP3-202ENST00000322147 TTC12Q9H892 705 aaPredicted RBP21.64■■□□□ 1.05
LTBP3-202ENST00000322147 U3KPZ7 1027 aaPredicted RBP21.64■■□□□ 1.05
LTBP3-202ENST00000322147 PLXNC1O60486 1568 aa21.64■■□□□ 1.05
LTBP3-202ENST00000322147 TIMM10P62072 90 aa21.63■■□□□ 1.05
LTBP3-202ENST00000322147 KRT32Q14532 448 aa21.63■■□□□ 1.05
LTBP3-202ENST00000322147 KLHL10Q6JEL2 608 aa21.63■■□□□ 1.05
LTBP3-202ENST00000322147 POGZQ7Z3K3 1410 aa21.63■■□□□ 1.05
LTBP3-202ENST00000322147 STARD3NLO95772 234 aa21.63■■□□□ 1.05
LTBP3-202ENST00000322147 AK2P54819 239 aa21.63■■□□□ 1.05
LTBP3-202ENST00000322147 CBX1P83916 185 aa21.63■■□□□ 1.05
LTBP3-202ENST00000322147 KDM5AP29375 1690 aaKnown RBP21.63■■□□□ 1.05
LTBP3-202ENST00000322147 IKQ13123 557 aaPredicted RBP21.63■■□□□ 1.05
LTBP3-202ENST00000322147 HOOK1Q9UJC3 728 aaKnown RBP21.63■■□□□ 1.05
LTBP3-202ENST00000322147 CFAP45Q9UL16 551 aa21.63■■□□□ 1.05
LTBP3-202ENST00000322147 ABCC1P33527 1531 aa21.62■■□□□ 1.05
LTBP3-202ENST00000322147 ADCY5O95622 1261 aa21.62■■□□□ 1.05
LTBP3-202ENST00000322147 IPO7O95373 1038 aaKnown RBP21.61■■□□□ 1.05
LTBP3-202ENST00000322147 NMIQ13287 307 aaPredicted RBP21.61■■□□□ 1.05
LTBP3-202ENST00000322147 CCDC183Q5T5S1 534 aa21.61■■□□□ 1.05
LTBP3-202ENST00000322147 KSR2Q6VAB6 950 aa21.61■■□□□ 1.05
LTBP3-202ENST00000322147 SMAP1Q8IYB5 467 aaPredicted RBP21.61■■□□□ 1.05
LTBP3-202ENST00000322147 TRIM22Q8IYM9 498 aa21.61■■□□□ 1.05
LTBP3-202ENST00000322147 UBAC1Q9BSL1 405 aa21.61■■□□□ 1.05
LTBP3-202ENST00000322147 GOLGA8BA8MQT2 603 aa21.61■■□□□ 1.05
LTBP3-202ENST00000322147 GSPT1P15170 499 aaKnown RBP21.61■■□□□ 1.05
LTBP3-202ENST00000322147 NAP1L1P55209 391 aaKnown RBP21.61■■□□□ 1.05
LTBP3-202ENST00000322147 NBPF6Q5VWK0 638 aa21.61■■□□□ 1.05
LTBP3-202ENST00000322147 NBPF4Q96M43 638 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms