RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 USP16Q9Y5T5 823 aa8.93□□□□□ -0.98
NPHP1-201ENST00000316534 ATRNO75882 1429 aa8.93□□□□□ -0.98
NPHP1-201ENST00000316534 SPATA31A6Q5VVP1 1343 aa8.93□□□□□ -0.98
NPHP1-201ENST00000316534 ANKRD45Q5TZF3 282 aa8.93□□□□□ -0.98
NPHP1-201ENST00000316534 IL27Q8NEV9 243 aa8.93□□□□□ -0.98
NPHP1-201ENST00000316534 LNPKQ9C0E8 428 aa8.93□□□□□ -0.98
NPHP1-201ENST00000316534 SNRKQ9NRH2 765 aa8.93□□□□□ -0.98
NPHP1-201ENST00000316534 HDAC5Q9UQL6 1122 aa8.93□□□□□ -0.98
NPHP1-201ENST00000316534 KIAA1551Q9HCM1 1747 aa8.93□□□□□ -0.98
NPHP1-201ENST00000316534 ZBTB7CA1YPR0 619 aa8.93□□□□□ -0.98
NPHP1-201ENST00000316534 DDX58O95786 925 aaKnown RBP8.93□□□□□ -0.98
NPHP1-201ENST00000316534 SLC39A6Q13433 755 aa8.93□□□□□ -0.98
NPHP1-201ENST00000316534 ATG3Q9NT62 314 aa8.93□□□□□ -0.98
NPHP1-201ENST00000316534 UBTFL1P0CB47 393 aaPredicted RBP8.92□□□□□ -0.98
NPHP1-201ENST00000316534 GCKRQ14397 625 aa8.92□□□□□ -0.98
NPHP1-201ENST00000316534 TICAM2Q86XR7 235 aa8.92□□□□□ -0.98
NPHP1-201ENST00000316534 TEX13AQ9BXU3 409 aaPredicted RBP8.92□□□□□ -0.98
NPHP1-201ENST00000316534 H7C1W4 665 aa8.92□□□□□ -0.98
NPHP1-201ENST00000316534 GRM8O00222 908 aa8.92□□□□□ -0.98
NPHP1-201ENST00000316534 PLA2G12BQ9BX93 195 aa8.92□□□□□ -0.98
NPHP1-201ENST00000316534 DDIT3P35638 169 aa8.92□□□□□ -0.98
NPHP1-201ENST00000316534 PDE1AP54750 535 aa8.92□□□□□ -0.98
NPHP1-201ENST00000316534 SNX21Q969T3 373 aa8.92□□□□□ -0.98
NPHP1-201ENST00000316534 ISCA1Q9BUE6 129 aa8.92□□□□□ -0.98
NPHP1-201ENST00000316534 BRWD3Q6RI45 1802 aa8.91□□□□□ -0.98
NPHP1-201ENST00000316534 RFX7Q2KHR2 1363 aa8.91□□□□□ -0.98
NPHP1-201ENST00000316534 PI4K2BQ8TCG2 481 aa8.91□□□□□ -0.98
NPHP1-201ENST00000316534 PIGBQ92521 554 aa8.91□□□□□ -0.98
NPHP1-201ENST00000316534 MYH7P12883 1935 aa8.91□□□□□ -0.98
NPHP1-201ENST00000316534 TOM1O60784 492 aa8.91□□□□□ -0.98
NPHP1-201ENST00000316534 VPS72Q15906 364 aa8.91□□□□□ -0.98
NPHP1-201ENST00000316534 SLC4A9Q96Q91 983 aa8.91□□□□□ -0.98
NPHP1-201ENST00000316534 LRRCC1Q9C099 1032 aa8.91□□□□□ -0.98
NPHP1-201ENST00000316534 QSER1Q2KHR3 1735 aa8.91□□□□□ -0.98
NPHP1-201ENST00000316534 TBC1D9Q6ZT07 1266 aa8.91□□□□□ -0.98
NPHP1-201ENST00000316534 PPP1R42Q7Z4L9 355 aa8.91□□□□□ -0.98
NPHP1-201ENST00000316534 TTC41PQ6P2S7 1318 aa8.91□□□□□ -0.98
NPHP1-201ENST00000316534 CDC45O75419 566 aa8.9□□□□□ -0.98
NPHP1-201ENST00000316534 EIF2S2P20042 333 aaKnown RBP8.9□□□□□ -0.98
NPHP1-201ENST00000316534 XAGE3Q8WTP9 111 aa8.9□□□□□ -0.98
NPHP1-201ENST00000316534 UBR3Q6ZT12 1888 aa8.9□□□□□ -0.98
NPHP1-201ENST00000316534 ONECUT3O60422 494 aaPredicted RBP8.9□□□□□ -0.98
NPHP1-201ENST00000316534 TTC5Q8N0Z6 440 aa8.9□□□□□ -0.98
NPHP1-201ENST00000316534 SUCLG2Q96I99 432 aa8.9□□□□□ -0.98
NPHP1-201ENST00000316534 COPRSQ9NQ92 184 aa8.9□□□□□ -0.98
NPHP1-201ENST00000316534 FOXO4P98177 505 aa8.9□□□□□ -0.99
NPHP1-201ENST00000316534 HSP90AB4PQ58FF6 505 aa8.9□□□□□ -0.99
NPHP1-201ENST00000316534 SLC4A10Q6U841 1118 aa8.9□□□□□ -0.99
NPHP1-201ENST00000316534 ANKRD13DQ6ZTN6 518 aa8.9□□□□□ -0.99
NPHP1-201ENST00000316534 C16orf71Q8IYS4 520 aaPredicted RBP8.9□□□□□ -0.99
NPHP1-201ENST00000316534 OTUD7AQ8TE49 926 aaPredicted RBP8.9□□□□□ -0.99
NPHP1-201ENST00000316534 COPS6Q7L5N1 327 aa8.89□□□□□ -0.99
NPHP1-201ENST00000316534 ANTXR1Q9H6X2 564 aa8.89□□□□□ -0.99
NPHP1-201ENST00000316534 AKAP11Q9UKA4 1901 aa8.89□□□□□ -0.99
NPHP1-201ENST00000316534 CDHR2Q9BYE9 1310 aa8.89□□□□□ -0.99
NPHP1-201ENST00000316534 NECTIN2Q92692 538 aa8.89□□□□□ -0.99
NPHP1-201ENST00000316534 NRXN2Q9P2S2 1712 aa8.89□□□□□ -0.99
NPHP1-201ENST00000316534 LAMA4Q16363 1823 aa8.89□□□□□ -0.99
NPHP1-201ENST00000316534 CYP19A1P11511 503 aaPredicted RBP8.89□□□□□ -0.99
NPHP1-201ENST00000316534 SDSP20132 328 aa8.89□□□□□ -0.99
NPHP1-201ENST00000316534 KIF1BPQ96EK5 621 aa8.89□□□□□ -0.99
NPHP1-201ENST00000316534 ANXA1P04083 346 aa8.88□□□□□ -0.99
NPHP1-201ENST00000316534 EVA1CP58658 441 aa8.88□□□□□ -0.99
NPHP1-201ENST00000316534 UNC5CLQ8IV45 518 aa8.88□□□□□ -0.99
NPHP1-201ENST00000316534 RHPN1Q8TCX5 695 aa8.88□□□□□ -0.99
NPHP1-201ENST00000316534 ZBTB22O15209 634 aa8.88□□□□□ -0.99
NPHP1-201ENST00000316534 CWF19L2Q2TBE0 894 aaKnown RBP8.88□□□□□ -0.99
NPHP1-201ENST00000316534 ERC1Q8IUD2 1116 aa8.88□□□□□ -0.99
NPHP1-201ENST00000316534 CCDC191Q8NCU4 936 aa8.88□□□□□ -0.99
NPHP1-201ENST00000316534 ERVV-1B6SEH8 477 aa8.87□□□□□ -0.99
NPHP1-201ENST00000316534 MX1P20591 662 aa8.87□□□□□ -0.99
NPHP1-201ENST00000316534 KCNB2Q92953 911 aa8.87□□□□□ -0.99
NPHP1-201ENST00000316534 C22orf23Q9BZE7 217 aa8.87□□□□□ -0.99
NPHP1-201ENST00000316534 GPR108Q9NPR9 543 aa8.87□□□□□ -0.99
NPHP1-201ENST00000316534 TMOD3Q9NYL9 352 aa8.87□□□□□ -0.99
NPHP1-201ENST00000316534 FBXO3Q9UK99 471 aa8.87□□□□□ -0.99
NPHP1-201ENST00000316534 LRRC37AA6NMS7 1700 aa8.87□□□□□ -0.99
NPHP1-201ENST00000316534 ZNF609O15014 1411 aa8.87□□□□□ -0.99
NPHP1-201ENST00000316534 RTL9Q8NET4 1388 aa8.87□□□□□ -0.99
NPHP1-201ENST00000316534 USP26Q9BXU7 913 aa8.87□□□□□ -0.99
NPHP1-201ENST00000316534 BICC1Q9H694 974 aaKnown RBP8.87□□□□□ -0.99
NPHP1-201ENST00000316534 TNS1Q9HBL0 1735 aaKnown RBP8.87□□□□□ -0.99
NPHP1-201ENST00000316534 SMARCA5O60264 1052 aaPredicted RBP8.87□□□□□ -0.99
NPHP1-201ENST00000316534 SASH1O94885 1247 aa8.87□□□□□ -0.99
NPHP1-201ENST00000316534 MARCH10Q8NA82 808 aaPredicted RBP8.87□□□□□ -0.99
NPHP1-201ENST00000316534 CSF1RP07333 972 aa8.86□□□□□ -0.99
NPHP1-201ENST00000316534 EPHA10Q5JZY3 1008 aa8.86□□□□□ -0.99
NPHP1-201ENST00000316534 STRN4Q9NRL3 753 aa8.86□□□□□ -0.99
NPHP1-201ENST00000316534 ABCC12Q96J65 1359 aa8.86□□□□□ -0.99
NPHP1-201ENST00000316534 MAP3K15Q6ZN16 1313 aa8.86□□□□□ -0.99
NPHP1-201ENST00000316534 CIAO1O76071 339 aa8.86□□□□□ -0.99
NPHP1-201ENST00000316534 PTPN12Q05209 780 aaKnown RBP8.86□□□□□ -0.99
NPHP1-201ENST00000316534 ASAP1Q9ULH1 1129 aa8.86□□□□□ -0.99
NPHP1-201ENST00000316534 EXOC6BQ9Y2D4 811 aa8.86□□□□□ -0.99
NPHP1-201ENST00000316534 RIC1Q4ADV7 1423 aa8.85□□□□□ -0.99
NPHP1-201ENST00000316534 EXOC5O00471 708 aa8.85□□□□□ -0.99
NPHP1-201ENST00000316534 SRGAP3O43295 1099 aa8.85□□□□□ -0.99
NPHP1-201ENST00000316534 IL6STP40189 918 aaPredicted RBP8.85□□□□□ -0.99
NPHP1-201ENST00000316534 AK7Q96M32 723 aa8.85□□□□□ -0.99
NPHP1-201ENST00000316534 INTS5Q6P9B9 1019 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms