RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 CDC5LQ99459 802 aaKnown RBP16.31■□□□□ 0.2
DDX54-202ENST00000314045 KIAA0232Q92628 1395 aa16.3■□□□□ 0.2
DDX54-202ENST00000314045 SLC5A1P13866 664 aa16.3■□□□□ 0.2
DDX54-202ENST00000314045 TDO2P48775 406 aa16.3■□□□□ 0.2
DDX54-202ENST00000314045 CWC22Q9HCG8 908 aaKnown RBP16.3■□□□□ 0.2
DDX54-202ENST00000314045 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.3■□□□□ 0.2
DDX54-202ENST00000314045 SDSP20132 328 aa16.3■□□□□ 0.2
DDX54-202ENST00000314045 KDM4AO75164 1064 aa16.3■□□□□ 0.2
DDX54-202ENST00000314045 USP19O94966 1318 aa16.3■□□□□ 0.2
DDX54-202ENST00000314045 KCNQ3O43525 872 aa16.29■□□□□ 0.2
DDX54-202ENST00000314045 ZNF521Q96K83 1311 aa16.29■□□□□ 0.2
DDX54-202ENST00000314045 CAMSAP1Q5T5Y3 1602 aa16.29■□□□□ 0.2
DDX54-202ENST00000314045 GOLIM4O00461 696 aa16.29■□□□□ 0.2
DDX54-202ENST00000314045 A1BGP04217 495 aa16.29■□□□□ 0.2
DDX54-202ENST00000314045 TRMT2AQ8IZ69 625 aaKnown RBP16.29■□□□□ 0.2
DDX54-202ENST00000314045 PHKG2P15735 406 aa16.29■□□□□ 0.2
DDX54-202ENST00000314045 CASTP20810 708 aaKnown RBP16.29■□□□□ 0.2
DDX54-202ENST00000314045 PRIM1P49642 420 aaKnown RBP16.29■□□□□ 0.2
DDX54-202ENST00000314045 NBPF5PQ86XG9 351 aaPredicted RBP16.29■□□□□ 0.2
DDX54-202ENST00000314045 ANKIB1Q9P2G1 1089 aa16.29■□□□□ 0.2
DDX54-202ENST00000314045 NIP7Q9Y221 180 aaKnown RBP eCLIP16.29■□□□□ 0.2
DDX54-202ENST00000314045 KIAA2012Q0VF49 1180 aa16.28■□□□□ 0.2
DDX54-202ENST00000314045 U3KPZ7 1027 aaPredicted RBP16.27■□□□□ 0.2
DDX54-202ENST00000314045 MAP3K12Q12852 859 aa16.27■□□□□ 0.2
DDX54-202ENST00000314045 ANKARQ7Z5J8 1434 aa16.27■□□□□ 0.19
DDX54-202ENST00000314045 IMMTQ16891 758 aaKnown RBP16.27■□□□□ 0.19
DDX54-202ENST00000314045 RPGRQ92834 1020 aaKnown RBP16.27■□□□□ 0.19
DDX54-202ENST00000314045 DIP2BQ9P265 1576 aa16.26■□□□□ 0.19
DDX54-202ENST00000314045 GIGYF1O75420 1035 aaPredicted RBP16.26■□□□□ 0.19
DDX54-202ENST00000314045 XBP1P17861 261 aa16.26■□□□□ 0.19
DDX54-202ENST00000314045 FAM98CQ17RN3 349 aaKnown RBP16.26■□□□□ 0.19
DDX54-202ENST00000314045 ZSCAN31Q96LW9 406 aaPredicted RBP16.26■□□□□ 0.19
DDX54-202ENST00000314045 BCL11BQ9C0K0 894 aaPredicted RBP16.26■□□□□ 0.19
DDX54-202ENST00000314045 BECN2A8MW95 431 aa16.26■□□□□ 0.19
DDX54-202ENST00000314045 IL15P40933 162 aaPredicted RBP16.26■□□□□ 0.19
DDX54-202ENST00000314045 CCDC152Q4G0S7 254 aa16.26■□□□□ 0.19
DDX54-202ENST00000314045 DDX46Q7L014 1031 aaKnown RBP16.26■□□□□ 0.19
DDX54-202ENST00000314045 DNAJC10Q8IXB1 793 aa16.26■□□□□ 0.19
DDX54-202ENST00000314045 SETDB2Q96T68 719 aa16.26■□□□□ 0.19
DDX54-202ENST00000314045 SAMD1Q6SPF0 538 aaPredicted RBP16.26■□□□□ 0.19
DDX54-202ENST00000314045 CCDC73Q6ZRK6 1079 aa16.25■□□□□ 0.19
DDX54-202ENST00000314045 PLBD2Q8NHP8 589 aa16.25■□□□□ 0.19
DDX54-202ENST00000314045 TRAK2O60296 914 aa16.25■□□□□ 0.19
DDX54-202ENST00000314045 CREBRFQ8IUR6 639 aa16.25■□□□□ 0.19
DDX54-202ENST00000314045 METTL22Q9BUU2 404 aaPredicted RBP16.25■□□□□ 0.19
DDX54-202ENST00000314045 CLTCQ00610 1675 aaKnown RBP16.25■□□□□ 0.19
DDX54-202ENST00000314045 LARP1BQ659C4 914 aaKnown RBP16.25■□□□□ 0.19
DDX54-202ENST00000314045 NAP1L5Q96NT1 182 aaPredicted RBP16.25■□□□□ 0.19
DDX54-202ENST00000314045 ERBB3P21860 1342 aa16.25■□□□□ 0.19
DDX54-202ENST00000314045 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.24■□□□□ 0.19
DDX54-202ENST00000314045 ERVV-2B6SEH9 535 aa16.24■□□□□ 0.19
DDX54-202ENST00000314045 TBC1D32Q96NH3 1257 aa16.24■□□□□ 0.19
DDX54-202ENST00000314045 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.24■□□□□ 0.19
DDX54-202ENST00000314045 KIF24Q5T7B8 1368 aa16.24■□□□□ 0.19
DDX54-202ENST00000314045 PRPF40AO75400 957 aaKnown RBP16.24■□□□□ 0.19
DDX54-202ENST00000314045 ATP2B1P20020 1258 aa16.24■□□□□ 0.19
DDX54-202ENST00000314045 BRINP3Q76B58 766 aa16.24■□□□□ 0.19
DDX54-202ENST00000314045 BICC1Q9H694 974 aaKnown RBP16.24■□□□□ 0.19
DDX54-202ENST00000314045 CIZ1Q9ULV3 898 aaPredicted RBP16.24■□□□□ 0.19
DDX54-202ENST00000314045 FIBPO43427 364 aa16.24■□□□□ 0.19
DDX54-202ENST00000314045 ATP2B3Q16720 1220 aa16.24■□□□□ 0.19
DDX54-202ENST00000314045 CTDP1Q9Y5B0 961 aaPredicted RBP16.24■□□□□ 0.19
DDX54-202ENST00000314045 SETBP1Q9Y6X0 1596 aa16.24■□□□□ 0.19
DDX54-202ENST00000314045 RTL1A6NKG5 1358 aa16.24■□□□□ 0.19
DDX54-202ENST00000314045 GOLGA6L19H0YKK7 550 aa16.24■□□□□ 0.19
DDX54-202ENST00000314045 TBC1D2Q9BYX2 928 aa16.24■□□□□ 0.19
DDX54-202ENST00000314045 USP16Q9Y5T5 823 aa16.24■□□□□ 0.19
DDX54-202ENST00000314045 WDR33Q9C0J8 1336 aaKnown RBP16.23■□□□□ 0.19
DDX54-202ENST00000314045 NLRP3Q96P20 1036 aa16.23■□□□□ 0.19
DDX54-202ENST00000314045 UTP14AQ9BVJ6 771 aaKnown RBP16.23■□□□□ 0.19
DDX54-202ENST00000314045 IRS4O14654 1257 aaPredicted RBP16.23■□□□□ 0.19
DDX54-202ENST00000314045 NBPF7P0C2Y1 421 aaPredicted RBP16.23■□□□□ 0.19
DDX54-202ENST00000314045 PLEKHM2Q8IWE5 1019 aa16.23■□□□□ 0.19
DDX54-202ENST00000314045 RTCBQ9Y3I0 505 aaKnown RBP16.23■□□□□ 0.19
DDX54-202ENST00000314045 RBM5P52756 815 aaKnown RBP eCLIP16.22■□□□□ 0.19
DDX54-202ENST00000314045 UBAC1Q9BSL1 405 aa16.22■□□□□ 0.19
DDX54-202ENST00000314045 NAPBQ9H115 298 aa16.22■□□□□ 0.19
DDX54-202ENST00000314045 BRMS1Q9HCU9 246 aa16.22■□□□□ 0.19
DDX54-202ENST00000314045 CDK12Q9NYV4 1490 aaPredicted RBP16.22■□□□□ 0.19
DDX54-202ENST00000314045 ADGRL3Q9HAR2 1447 aa16.22■□□□□ 0.19
DDX54-202ENST00000314045 CLSTN1O94985 981 aa16.22■□□□□ 0.19
DDX54-202ENST00000314045 FAM89AQ96GI7 184 aa16.22■□□□□ 0.19
DDX54-202ENST00000314045 CCDC69A6NI79 296 aa16.22■□□□□ 0.19
DDX54-202ENST00000314045 NUP133Q8WUM0 1156 aa16.22■□□□□ 0.19
DDX54-202ENST00000314045 CARD10Q9BWT7 1032 aa16.22■□□□□ 0.19
DDX54-202ENST00000314045 C6orf229H3BNL8 230 aa16.22■□□□□ 0.19
DDX54-202ENST00000314045 MINDY4BA8MYZ0 360 aa16.21■□□□□ 0.19
DDX54-202ENST00000314045 C8orf34Q49A92 452 aa16.21■□□□□ 0.19
DDX54-202ENST00000314045 ANKRD18AQ8IVF6 992 aa16.21■□□□□ 0.19
DDX54-202ENST00000314045 TRIM22Q8IYM9 498 aa16.21■□□□□ 0.19
DDX54-202ENST00000314045 MBD3O95983 291 aa16.21■□□□□ 0.18
DDX54-202ENST00000314045 IKQ13123 557 aaPredicted RBP16.2■□□□□ 0.18
DDX54-202ENST00000314045 USP21Q9UK80 565 aa16.2■□□□□ 0.18
DDX54-202ENST00000314045 ATP2B2Q01814 1243 aa16.2■□□□□ 0.18
DDX54-202ENST00000314045 DZIP1Q86YF9 867 aaKnown RBP16.2■□□□□ 0.18
DDX54-202ENST00000314045 NEXMIFQ5QGS0 1516 aa16.2■□□□□ 0.18
DDX54-202ENST00000314045 SPATA31A3Q5VYP0 1347 aa16.19■□□□□ 0.18
DDX54-202ENST00000314045 TTF1Q15361 905 aaPredicted RBP16.19■□□□□ 0.18
DDX54-202ENST00000314045 TPTE2Q6XPS3 522 aa16.19■□□□□ 0.18
DDX54-202ENST00000314045 CCDC191Q8NCU4 936 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms