RNA–Protein interactions for RNA: ENST00000313663.11

C2CD3-201, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C2CD3, Length 6,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-201ENST00000313663 AACSQ86V21 672 aa10.48□□□□□ -0.73
C2CD3-201ENST00000313663 CRACR2BQ8N4Y2 399 aaPredicted RBP10.48□□□□□ -0.73
C2CD3-201ENST00000313663 C1orf115Q9H7X2 142 aa10.48□□□□□ -0.73
C2CD3-201ENST00000313663 RIMS1Q86UR5 1692 aaKnown RBP10.48□□□□□ -0.73
C2CD3-201ENST00000313663 PLCD4Q9BRC7 762 aa10.48□□□□□ -0.73
C2CD3-201ENST00000313663 EZRP15311 586 aaKnown RBP10.48□□□□□ -0.73
C2CD3-201ENST00000313663 TSR2Q969E8 191 aaKnown RBP10.48□□□□□ -0.73
C2CD3-201ENST00000313663 AIDAQ96BJ3 306 aa10.48□□□□□ -0.73
C2CD3-201ENST00000313663 DIP2AQ14689 1571 aa10.47□□□□□ -0.73
C2CD3-201ENST00000313663 SPINK5Q9NQ38 1064 aaPredicted RBP10.47□□□□□ -0.73
C2CD3-201ENST00000313663 CDC42BPGQ6DT37 1551 aa10.47□□□□□ -0.73
C2CD3-201ENST00000313663 BTBD11A6QL63 1104 aa10.47□□□□□ -0.73
C2CD3-201ENST00000313663 SEPT7Q16181 437 aaKnown RBP10.47□□□□□ -0.73
C2CD3-201ENST00000313663 WDR78Q5VTH9 848 aa10.47□□□□□ -0.73
C2CD3-201ENST00000313663 LARP1BQ659C4 914 aaKnown RBP10.47□□□□□ -0.73
C2CD3-201ENST00000313663 DNAI2Q9GZS0 605 aa10.47□□□□□ -0.73
C2CD3-201ENST00000313663 PDZRN3Q9UPQ7 1066 aa10.47□□□□□ -0.73
C2CD3-201ENST00000313663 PDIA4P13667 645 aaKnown RBP10.47□□□□□ -0.73
C2CD3-201ENST00000313663 RBM25P49756 843 aaKnown RBP10.47□□□□□ -0.73
C2CD3-201ENST00000313663 XPCQ01831 940 aaPredicted RBP10.47□□□□□ -0.73
C2CD3-201ENST00000313663 WDR63Q8IWG1 891 aa10.47□□□□□ -0.73
C2CD3-201ENST00000313663 CCDC39Q9UFE4 941 aa10.47□□□□□ -0.73
C2CD3-201ENST00000313663 EMILIN1Q9Y6C2 1016 aa10.47□□□□□ -0.73
C2CD3-201ENST00000313663 TTC21BQ7Z4L5 1316 aa10.47□□□□□ -0.73
C2CD3-201ENST00000313663 FBLN1P23142 703 aa10.47□□□□□ -0.73
C2CD3-201ENST00000313663 USP5P45974 858 aa10.47□□□□□ -0.73
C2CD3-201ENST00000313663 TNIP1Q15025 636 aa10.47□□□□□ -0.73
C2CD3-201ENST00000313663 CAVIN1Q6NZI2 390 aaKnown RBP10.47□□□□□ -0.73
C2CD3-201ENST00000313663 ATF7IPQ6VMQ6 1270 aa10.47□□□□□ -0.73
C2CD3-201ENST00000313663 TRMT2AQ8IZ69 625 aaKnown RBP10.47□□□□□ -0.73
C2CD3-201ENST00000313663 NGLY1Q96IV0 654 aa10.47□□□□□ -0.73
C2CD3-201ENST00000313663 CCDC85AQ96PX6 553 aaPredicted RBP10.47□□□□□ -0.73
C2CD3-201ENST00000313663 WDR33Q9C0J8 1336 aaKnown RBP10.47□□□□□ -0.73
C2CD3-201ENST00000313663 FANCIQ9NVI1 1328 aa10.47□□□□□ -0.73
C2CD3-201ENST00000313663 PNPLA6Q8IY17 1366 aa10.47□□□□□ -0.73
C2CD3-201ENST00000313663 NKTRP30414 1462 aaKnown RBP10.47□□□□□ -0.73
C2CD3-201ENST00000313663 AXDND1Q5T1B0 1012 aaPredicted RBP10.47□□□□□ -0.73
C2CD3-201ENST00000313663 WASF1Q92558 559 aa10.47□□□□□ -0.73
C2CD3-201ENST00000313663 CETN2P41208 172 aa10.46□□□□□ -0.73
C2CD3-201ENST00000313663 CAVIN4Q5BKX8 364 aa10.46□□□□□ -0.73
C2CD3-201ENST00000313663 METTL24Q5JXM2 366 aa10.46□□□□□ -0.73
C2CD3-201ENST00000313663 ZRANB1Q9UGI0 708 aa10.46□□□□□ -0.73
C2CD3-201ENST00000313663 PPP1R12BO60237 982 aaPredicted RBP10.46□□□□□ -0.73
C2CD3-201ENST00000313663 IBSPP21815 317 aaPredicted RBP10.46□□□□□ -0.73
C2CD3-201ENST00000313663 PAXIP1Q6ZW49 1069 aaPredicted RBP10.46□□□□□ -0.73
C2CD3-201ENST00000313663 RPAP2Q8IXW5 612 aaPredicted RBP10.46□□□□□ -0.73
C2CD3-201ENST00000313663 DMRT2Q9Y5R5 561 aa10.46□□□□□ -0.73
C2CD3-201ENST00000313663 CCDC192P0DO97 292 aa10.46□□□□□ -0.74
C2CD3-201ENST00000313663 STK3Q13188 491 aa10.46□□□□□ -0.74
C2CD3-201ENST00000313663 TMOD3Q9NYL9 352 aa10.46□□□□□ -0.74
C2CD3-201ENST00000313663 ADGRB2O60241 1585 aa10.46□□□□□ -0.74
C2CD3-201ENST00000313663 ANKRD62A6NC57 917 aa10.46□□□□□ -0.74
C2CD3-201ENST00000313663 FCHSD2O94868 740 aa10.46□□□□□ -0.74
C2CD3-201ENST00000313663 SCLT1Q96NL6 688 aa10.46□□□□□ -0.74
C2CD3-201ENST00000313663 TSPYL1Q9H0U9 437 aa10.46□□□□□ -0.74
C2CD3-201ENST00000313663 AATKQ6ZMQ8 1374 aa10.45□□□□□ -0.74
C2CD3-201ENST00000313663 PRPF40AO75400 957 aaKnown RBP10.45□□□□□ -0.74
C2CD3-201ENST00000313663 POTEJP0CG39 1038 aa10.45□□□□□ -0.74
C2CD3-201ENST00000313663 AKAP2Q9Y2D5 859 aa10.45□□□□□ -0.74
C2CD3-201ENST00000313663 MAP7D2Q96T17 732 aa10.45□□□□□ -0.74
C2CD3-201ENST00000313663 CFAP45Q9UL16 551 aa10.45□□□□□ -0.74
C2CD3-201ENST00000313663 GOLGA6L10A6NI86 522 aa10.45□□□□□ -0.74
C2CD3-201ENST00000313663 LARP1Q6PKG0 1096 aaKnown RBP10.45□□□□□ -0.74
C2CD3-201ENST00000313663 MKNK2Q9HBH9 465 aa10.45□□□□□ -0.74
C2CD3-201ENST00000313663 SHPRHQ149N8 1683 aa10.45□□□□□ -0.74
C2CD3-201ENST00000313663 ZSCAN31Q96LW9 406 aaPredicted RBP10.45□□□□□ -0.74
C2CD3-201ENST00000313663 POLR3DP05423 398 aaPredicted RBP10.44□□□□□ -0.74
C2CD3-201ENST00000313663 MATR3P43243 847 aaKnown RBP eCLIP10.44□□□□□ -0.74
C2CD3-201ENST00000313663 TMEM87AQ8NBN3 555 aa10.44□□□□□ -0.74
C2CD3-201ENST00000313663 CCDC97Q96F63 343 aaPredicted RBP10.44□□□□□ -0.74
C2CD3-201ENST00000313663 HMGN5P82970 282 aaKnown RBP10.44□□□□□ -0.74
C2CD3-201ENST00000313663 RRS1Q15050 365 aaKnown RBP10.44□□□□□ -0.74
C2CD3-201ENST00000313663 TMPOP42166 694 aaKnown RBP10.44□□□□□ -0.74
C2CD3-201ENST00000313663 TTLL12Q14166 644 aaPredicted RBP10.44□□□□□ -0.74
C2CD3-201ENST00000313663 IMMTQ16891 758 aaKnown RBP10.44□□□□□ -0.74
C2CD3-201ENST00000313663 HSP90AB3PQ58FF7 597 aa10.44□□□□□ -0.74
C2CD3-201ENST00000313663 IL1RAPL2Q9NP60 686 aa10.44□□□□□ -0.74
C2CD3-201ENST00000313663 USP6P35125 1406 aa10.44□□□□□ -0.74
C2CD3-201ENST00000313663 COL3A1P02461 1466 aaPredicted RBP10.44□□□□□ -0.74
C2CD3-201ENST00000313663 CCDC196A0A1B0GTZ2 297 aa10.44□□□□□ -0.74
C2CD3-201ENST00000313663 SKIDA1Q1XH10 827 aa10.44□□□□□ -0.74
C2CD3-201ENST00000313663 PPP4R3AQ6IN85 833 aa10.44□□□□□ -0.74
C2CD3-201ENST00000313663 ADAMTS2O95450 1211 aa10.44□□□□□ -0.74
C2CD3-201ENST00000313663 CEP57L1Q8IYX8 460 aa10.44□□□□□ -0.74
C2CD3-201ENST00000313663 TNMDQ9H2S6 317 aa10.44□□□□□ -0.74
C2CD3-201ENST00000313663 TRAK2O60296 914 aa10.43□□□□□ -0.74
C2CD3-201ENST00000313663 SEPT11Q9NVA2 429 aaKnown RBP10.43□□□□□ -0.74
C2CD3-201ENST00000313663 SETD1BQ9UPS6 1966 aaKnown RBP10.43□□□□□ -0.74
C2CD3-201ENST00000313663 MAP4K4O95819 1239 aaPredicted RBP10.43□□□□□ -0.74
C2CD3-201ENST00000313663 TSPY26PQ9H489 355 aa10.43□□□□□ -0.74
C2CD3-201ENST00000313663 U3KPZ7 1027 aaPredicted RBP10.43□□□□□ -0.74
C2CD3-201ENST00000313663 IQSEC2Q5JU85 1478 aa10.43□□□□□ -0.74
C2CD3-201ENST00000313663 TTC21AQ8NDW8 1320 aa10.43□□□□□ -0.74
C2CD3-201ENST00000313663 SEC63Q9UGP8 760 aaKnown RBP10.43□□□□□ -0.74
C2CD3-201ENST00000313663 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.43□□□□□ -0.74
C2CD3-201ENST00000313663 CTCFLQ8NI51 663 aaPredicted RBP10.43□□□□□ -0.74
C2CD3-201ENST00000313663 PLEKHF1Q96S99 279 aa10.43□□□□□ -0.74
C2CD3-201ENST00000313663 ANKRD26Q9UPS8 1709 aa10.43□□□□□ -0.74
C2CD3-201ENST00000313663 DZIP1Q86YF9 867 aaKnown RBP10.43□□□□□ -0.74
C2CD3-201ENST00000313663 CHMP4BP1P59074 171 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms