RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 STK31Q9BXU1 1019 aa25.56■■□□□ 1.68
VEGFB-201ENST00000309422 BCL2L12Q9HB09 334 aa25.56■■□□□ 1.68
VEGFB-201ENST00000309422 CHPF2Q9P2E5 772 aa25.56■■□□□ 1.68
VEGFB-201ENST00000309422 FANCIQ9NVI1 1328 aa25.55■■□□□ 1.68
VEGFB-201ENST00000309422 SERPINB2P05120 415 aa25.55■■□□□ 1.68
VEGFB-201ENST00000309422 ST5P78524 1137 aa25.55■■□□□ 1.68
VEGFB-201ENST00000309422 GPR162Q16538 588 aa25.55■■□□□ 1.68
VEGFB-201ENST00000309422 TBC1D9BQ66K14 1250 aa25.55■■□□□ 1.68
VEGFB-201ENST00000309422 HYPKQ9NX55 129 aa25.55■■□□□ 1.68
VEGFB-201ENST00000309422 TGFB2P61812 414 aa25.54■■□□□ 1.68
VEGFB-201ENST00000309422 CNBD1Q8NA66 436 aa25.54■■□□□ 1.68
VEGFB-201ENST00000309422 NLGN2Q8NFZ4 835 aa25.54■■□□□ 1.68
VEGFB-201ENST00000309422 ZBTB3Q9H5J0 574 aa25.54■■□□□ 1.68
VEGFB-201ENST00000309422 NIP7Q9Y221 180 aaKnown RBP eCLIP25.54■■□□□ 1.68
VEGFB-201ENST00000309422 BCORQ6W2J9 1755 aa25.53■■□□□ 1.68
VEGFB-201ENST00000309422 AIMP1Q12904 312 aaKnown RBP25.53■■□□□ 1.68
VEGFB-201ENST00000309422 TWISTNBQ3B726 338 aaPredicted RBP25.53■■□□□ 1.68
VEGFB-201ENST00000309422 HSP90AB3PQ58FF7 597 aa25.53■■□□□ 1.68
VEGFB-201ENST00000309422 NBPF5PQ86XG9 351 aaPredicted RBP25.52■■□□□ 1.68
VEGFB-201ENST00000309422 ANXA1P04083 346 aa25.51■■□□□ 1.67
VEGFB-201ENST00000309422 GTF2E1P29083 439 aaPredicted RBP25.51■■□□□ 1.67
VEGFB-201ENST00000309422 C8orf58Q8NAV2 365 aa25.51■■□□□ 1.67
VEGFB-201ENST00000309422 PROSER3Q2NL68 480 aa25.5■■□□□ 1.67
VEGFB-201ENST00000309422 TTLL7Q6ZT98 887 aa25.5■■□□□ 1.67
VEGFB-201ENST00000309422 COPS6Q7L5N1 327 aa25.5■■□□□ 1.67
VEGFB-201ENST00000309422 XAGE3Q8WTP9 111 aa25.5■■□□□ 1.67
VEGFB-201ENST00000309422 E9PSI1 815 aa25.49■■□□□ 1.67
VEGFB-201ENST00000309422 NYXQ9GZU5 481 aa25.49■■□□□ 1.67
VEGFB-201ENST00000309422 DDX58O95786 925 aaKnown RBP25.48■■□□□ 1.67
VEGFB-201ENST00000309422 PDIA6Q15084 440 aa25.48■■□□□ 1.67
VEGFB-201ENST00000309422 TPTE2Q6XPS3 522 aa25.48■■□□□ 1.67
VEGFB-201ENST00000309422 PDZRN3Q9UPQ7 1066 aa25.47■■□□□ 1.67
VEGFB-201ENST00000309422 ATP10DQ9P241 1426 aa25.47■■□□□ 1.67
VEGFB-201ENST00000309422 PDE6BP35913 854 aa25.46■■□□□ 1.67
VEGFB-201ENST00000309422 HLFQ16534 295 aa25.46■■□□□ 1.67
VEGFB-201ENST00000309422 GIGYF2Q6Y7W6 1299 aaKnown RBP25.46■■□□□ 1.67
VEGFB-201ENST00000309422 GRIN3BO60391 1043 aa25.45■■□□□ 1.67
VEGFB-201ENST00000309422 PXDNLA1KZ92 1463 aa25.45■■□□□ 1.66
VEGFB-201ENST00000309422 EXOSC9Q06265 439 aaKnown RBP25.44■■□□□ 1.66
VEGFB-201ENST00000309422 PARP10Q53GL7 1025 aa25.44■■□□□ 1.66
VEGFB-201ENST00000309422 TSPYL6Q8N831 410 aa25.44■■□□□ 1.66
VEGFB-201ENST00000309422 ZNF521Q96K83 1311 aa25.44■■□□□ 1.66
VEGFB-201ENST00000309422 FAM177BA6PVY3 158 aa25.44■■□□□ 1.66
VEGFB-201ENST00000309422 GPTP24298 496 aa25.44■■□□□ 1.66
VEGFB-201ENST00000309422 PRR5LQ6MZQ0 368 aa25.44■■□□□ 1.66
VEGFB-201ENST00000309422 ANKRD13DQ6ZTN6 518 aa25.44■■□□□ 1.66
VEGFB-201ENST00000309422 PPP1R42Q7Z4L9 355 aa25.44■■□□□ 1.66
VEGFB-201ENST00000309422 PLBD2Q8NHP8 589 aa25.44■■□□□ 1.66
VEGFB-201ENST00000309422 H0YIN7 160 aa25.43■■□□□ 1.66
VEGFB-201ENST00000309422 LRP10Q7Z4F1 713 aa25.43■■□□□ 1.66
VEGFB-201ENST00000309422 RIC3Q7Z5B4 369 aa25.43■■□□□ 1.66
VEGFB-201ENST00000309422 BRIP1Q9BX63 1249 aa25.43■■□□□ 1.66
VEGFB-201ENST00000309422 IBTKQ9P2D0 1353 aaPredicted RBP25.42■■□□□ 1.66
VEGFB-201ENST00000309422 A0A0G2JLW4 131 aa25.42■■□□□ 1.66
VEGFB-201ENST00000309422 DPEP1P16444 411 aa25.42■■□□□ 1.66
VEGFB-201ENST00000309422 PIM2Q9P1W9 311 aa25.42■■□□□ 1.66
VEGFB-201ENST00000309422 C2CD5Q86YS7 1000 aa25.41■■□□□ 1.66
VEGFB-201ENST00000309422 HNRNPUQ00839 825 aaKnown RBP eCLIP25.4■■□□□ 1.66
VEGFB-201ENST00000309422 WWC3Q9ULE0 1092 aa25.4■■□□□ 1.66
VEGFB-201ENST00000309422 BCS1LQ9Y276 419 aa25.4■■□□□ 1.66
VEGFB-201ENST00000309422 KIF13BQ9NQT8 1826 aa25.39■■□□□ 1.65
VEGFB-201ENST00000309422 NRXN2Q9P2S2 1712 aa25.39■■□□□ 1.65
VEGFB-201ENST00000309422 DALRD3Q5D0E6 543 aaKnown RBP25.38■■□□□ 1.65
VEGFB-201ENST00000309422 SPINK5Q9NQ38 1064 aaPredicted RBP25.38■■□□□ 1.65
VEGFB-201ENST00000309422 RNF123Q5XPI4 1314 aa25.38■■□□□ 1.65
VEGFB-201ENST00000309422 SLC4A2P04920 1241 aa25.37■■□□□ 1.65
VEGFB-201ENST00000309422 TCIRG1Q13488 830 aa25.37■■□□□ 1.65
VEGFB-201ENST00000309422 ZNF34Q8IZ26 560 aa25.37■■□□□ 1.65
VEGFB-201ENST00000309422 UTP14AQ9BVJ6 771 aaKnown RBP25.37■■□□□ 1.65
VEGFB-201ENST00000309422 CHRNA5P30532 468 aa25.36■■□□□ 1.65
VEGFB-201ENST00000309422 TCERG1O14776 1098 aaKnown RBP25.35■■□□□ 1.65
VEGFB-201ENST00000309422 NEXNQ0ZGT2 675 aa25.35■■□□□ 1.65
VEGFB-201ENST00000309422 CCDC24Q8N4L8 307 aa25.35■■□□□ 1.65
VEGFB-201ENST00000309422 ZNF622Q969S3 477 aaKnown RBP eCLIP25.35■■□□□ 1.65
VEGFB-201ENST00000309422 PHAXQ9H814 394 aaKnown RBP25.35■■□□□ 1.65
VEGFB-201ENST00000309422 UBN2Q6ZU65 1347 aa25.35■■□□□ 1.65
VEGFB-201ENST00000309422 AFDNP55196 1824 aaKnown RBP25.35■■□□□ 1.65
VEGFB-201ENST00000309422 VAMP4O75379 141 aa25.34■■□□□ 1.65
VEGFB-201ENST00000309422 SLFN5Q08AF3 891 aa25.34■■□□□ 1.65
VEGFB-201ENST00000309422 FKBP5Q13451 457 aaPredicted RBP25.33■■□□□ 1.65
VEGFB-201ENST00000309422 TRMT112Q9UI30 125 aaKnown RBP25.33■■□□□ 1.65
VEGFB-201ENST00000309422 YBX3P16989 372 aaKnown RBP eCLIP25.32■■□□□ 1.646e-9■■□□□ 13.5
VEGFB-201ENST00000309422 SUSD4Q5VX71 490 aa25.32■■□□□ 1.64
VEGFB-201ENST00000309422 NUTM1Q86Y26 1132 aa25.32■■□□□ 1.64
VEGFB-201ENST00000309422 TTLL6Q8N841 843 aa25.32■■□□□ 1.64
VEGFB-201ENST00000309422 HSP90B1P14625 803 aaKnown RBP25.31■■□□□ 1.64
VEGFB-201ENST00000309422 FLIIQ13045 1269 aa25.31■■□□□ 1.64
VEGFB-201ENST00000309422 NLRP10Q86W26 655 aa25.31■■□□□ 1.64
VEGFB-201ENST00000309422 CNKSR1Q969H4 720 aa25.31■■□□□ 1.64
VEGFB-201ENST00000309422 ZNF428Q96B54 188 aa25.31■■□□□ 1.64
VEGFB-201ENST00000309422 MASTLQ96GX5 879 aa25.31■■□□□ 1.64
VEGFB-201ENST00000309422 NUP98P52948 1817 aa25.31■■□□□ 1.64
VEGFB-201ENST00000309422 KSR2Q6VAB6 950 aa25.31■■□□□ 1.64
VEGFB-201ENST00000309422 RPGRQ92834 1020 aaKnown RBP25.31■■□□□ 1.64
VEGFB-201ENST00000309422 MYD88Q99836 296 aa25.31■■□□□ 1.64
VEGFB-201ENST00000309422 SH3TC1Q8TE82 1336 aa25.31■■□□□ 1.64
VEGFB-201ENST00000309422 N4BP2Q86UW6 1770 aaPredicted RBP25.3■■□□□ 1.64
VEGFB-201ENST00000309422 NTSR2O95665 410 aa25.3■■□□□ 1.64
VEGFB-201ENST00000309422 ERFEQ4G0M1 354 aa25.3■■□□□ 1.64
VEGFB-201ENST00000309422 STYK1Q6J9G0 422 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms