RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 RHPN1Q8TCX5 695 aa24.45■■□□□ 1.5
LETM1-201ENST00000302787 C16orf45Q96MC5 204 aaPredicted RBP24.45■■□□□ 1.5
LETM1-201ENST00000302787 HMG20BQ9P0W2 317 aa24.45■■□□□ 1.5
LETM1-201ENST00000302787 ACEP12821 1306 aa24.44■■□□□ 1.5
LETM1-201ENST00000302787 RANBP6O60518 1105 aaKnown RBP24.44■■□□□ 1.5
LETM1-201ENST00000302787 TRMT1Q9NXH9 659 aaKnown RBP24.44■■□□□ 1.5
LETM1-201ENST00000302787 RNF41Q9H4P4 317 aaPredicted RBP24.44■■□□□ 1.5
LETM1-201ENST00000302787 POLR3DP05423 398 aaPredicted RBP24.44■■□□□ 1.5
LETM1-201ENST00000302787 MRPL50Q8N5N7 158 aaKnown RBP24.43■■□□□ 1.5
LETM1-201ENST00000302787 KDM5BQ9UGL1 1544 aa24.43■■□□□ 1.5
LETM1-201ENST00000302787 CBX1P83916 185 aa24.43■■□□□ 1.5
LETM1-201ENST00000302787 IQCA1Q86XH1 822 aa24.43■■□□□ 1.5
LETM1-201ENST00000302787 FKBP15Q5T1M5 1219 aa24.43■■□□□ 1.5
LETM1-201ENST00000302787 GSDMDP57764 484 aa24.43■■□□□ 1.5
LETM1-201ENST00000302787 ZBTB3Q9H5J0 574 aa24.43■■□□□ 1.5
LETM1-201ENST00000302787 PEG3Q9GZU2 1588 aa24.42■■□□□ 1.5
LETM1-201ENST00000302787 KIF4BQ2VIQ3 1234 aa24.42■■□□□ 1.5
LETM1-201ENST00000302787 USP16Q9Y5T5 823 aa24.42■■□□□ 1.5
LETM1-201ENST00000302787 ZSCAN22P10073 491 aaPredicted RBP24.42■■□□□ 1.5
LETM1-201ENST00000302787 LRSAM1Q6UWE0 723 aa24.42■■□□□ 1.5
LETM1-201ENST00000302787 ANKRD44Q8N8A2 993 aa24.42■■□□□ 1.5
LETM1-201ENST00000302787 BIN1O00499 593 aa24.41■■□□□ 1.5
LETM1-201ENST00000302787 PDE1AP54750 535 aa24.41■■□□□ 1.5
LETM1-201ENST00000302787 CGNQ9P2M7 1197 aaKnown RBP24.41■■□□□ 1.5
LETM1-201ENST00000302787 SEPT7Q16181 437 aaKnown RBP24.41■■□□□ 1.5
LETM1-201ENST00000302787 ZNF165P49910 485 aa24.41■■□□□ 1.5
LETM1-201ENST00000302787 CRACR2AQ9BSW2 395 aa24.41■■□□□ 1.5
LETM1-201ENST00000302787 TMC6Q7Z403 805 aa24.41■■□□□ 1.5
LETM1-201ENST00000302787 TAX1BP1Q86VP1 789 aa24.41■■□□□ 1.5
LETM1-201ENST00000302787 DENND4BO75064 1496 aaPredicted RBP24.4■■□□□ 1.5
LETM1-201ENST00000302787 MPHOSPH10O00566 681 aaKnown RBP24.4■■□□□ 1.5
LETM1-201ENST00000302787 ATP5J2-PTCD1G3V325 749 aa24.4■■□□□ 1.5
LETM1-201ENST00000302787 UBE3BQ7Z3V4 1068 aa24.4■■□□□ 1.5
LETM1-201ENST00000302787 RAPGEF6Q8TEU7 1601 aa24.4■■□□□ 1.5
LETM1-201ENST00000302787 DZIP1Q86YF9 867 aaKnown RBP24.39■■□□□ 1.5
LETM1-201ENST00000302787 CWC25Q9NXE8 425 aaPredicted RBP24.39■■□□□ 1.5
LETM1-201ENST00000302787 JAKMIP3Q5VZ66 844 aa24.39■■□□□ 1.5
LETM1-201ENST00000302787 SNX21Q969T3 373 aa24.39■■□□□ 1.5
LETM1-201ENST00000302787 ESYT1Q9BSJ8 1104 aa24.39■■□□□ 1.5
LETM1-201ENST00000302787 POLR3AO14802 1390 aaPredicted RBP24.39■■□□□ 1.5
LETM1-201ENST00000302787 TSG101Q99816 390 aa24.39■■□□□ 1.49
LETM1-201ENST00000302787 SNRKQ9NRH2 765 aa24.39■■□□□ 1.49
LETM1-201ENST00000302787 ORC3Q9UBD5 711 aaPredicted RBP24.39■■□□□ 1.49
LETM1-201ENST00000302787 ANXA1P04083 346 aa24.38■■□□□ 1.49
LETM1-201ENST00000302787 IARSP41252 1262 aaKnown RBP24.38■■□□□ 1.49
LETM1-201ENST00000302787 ENOX2Q16206 610 aaKnown RBP24.38■■□□□ 1.49
LETM1-201ENST00000302787 C8orf58Q8NAV2 365 aa24.38■■□□□ 1.49
LETM1-201ENST00000302787 CPLX3Q8WVH0 158 aa24.38■■□□□ 1.49
LETM1-201ENST00000302787 TTF1Q15361 905 aaPredicted RBP24.38■■□□□ 1.49
LETM1-201ENST00000302787 ZNF608Q9ULD9 1512 aaPredicted RBP24.38■■□□□ 1.49
LETM1-201ENST00000302787 HCLS1P14317 486 aaPredicted RBP24.38■■□□□ 1.49
LETM1-201ENST00000302787 NUP88Q99567 741 aaPredicted RBP24.38■■□□□ 1.49
LETM1-201ENST00000302787 NLRP5P59047 1200 aa24.38■■□□□ 1.49
LETM1-201ENST00000302787 HAND2P61296 217 aa24.38■■□□□ 1.49
LETM1-201ENST00000302787 GIMAP6Q6P9H5 292 aa24.38■■□□□ 1.49
LETM1-201ENST00000302787 IFNL2Q8IZJ0 200 aa24.38■■□□□ 1.49
LETM1-201ENST00000302787 CATIPQ7Z7H3 387 aa24.37■■□□□ 1.49
LETM1-201ENST00000302787 DUOX2Q9NRD8 1548 aa24.37■■□□□ 1.49
LETM1-201ENST00000302787 GOLGA6L7A0A1B0GV03 622 aa24.37■■□□□ 1.49
LETM1-201ENST00000302787 GPTP24298 496 aa24.37■■□□□ 1.49
LETM1-201ENST00000302787 NECAB1Q8N987 351 aa24.37■■□□□ 1.49
LETM1-201ENST00000302787 PPP1R12BO60237 982 aaPredicted RBP24.37■■□□□ 1.49
LETM1-201ENST00000302787 TMEM67Q5HYA8 995 aa24.37■■□□□ 1.49
LETM1-201ENST00000302787 CACNA2D4Q7Z3S7 1137 aa24.37■■□□□ 1.49
LETM1-201ENST00000302787 ZSCAN16Q9H4T2 348 aaPredicted RBP24.37■■□□□ 1.49
LETM1-201ENST00000302787 CCDC144CPQ8IYA2 1237 aa24.36■■□□□ 1.49
LETM1-201ENST00000302787 TNNQ9UQP3 1299 aa24.36■■□□□ 1.49
LETM1-201ENST00000302787 ITSN2Q9NZM3 1697 aa24.36■■□□□ 1.49
LETM1-201ENST00000302787 CAVIN2O95810 425 aa24.36■■□□□ 1.49
LETM1-201ENST00000302787 ANAPC15P60006 121 aa24.36■■□□□ 1.49
LETM1-201ENST00000302787 PRDM10Q9NQV6 1147 aa24.36■■□□□ 1.49
LETM1-201ENST00000302787 CCDC194A0A1B0GVG4 234 aa24.36■■□□□ 1.49
LETM1-201ENST00000302787 ZNF444Q8N0Y2 327 aaPredicted RBP24.36■■□□□ 1.49
LETM1-201ENST00000302787 NCOA7Q8NI08 942 aa24.36■■□□□ 1.49
LETM1-201ENST00000302787 MAP9Q49MG5 647 aa24.35■■□□□ 1.49
LETM1-201ENST00000302787 CHPF2Q9P2E5 772 aa24.35■■□□□ 1.49
LETM1-201ENST00000302787 CNPY2Q9Y2B0 182 aa24.35■■□□□ 1.49
LETM1-201ENST00000302787 PPFIA3O75145 1194 aa24.35■■□□□ 1.49
LETM1-201ENST00000302787 ZPR1O75312 459 aa24.35■■□□□ 1.49
LETM1-201ENST00000302787 YEATS4O95619 227 aa24.35■■□□□ 1.49
LETM1-201ENST00000302787 METAP2P50579 478 aaKnown RBP eCLIP24.34■■□□□ 1.49
LETM1-201ENST00000302787 LDHAL6AQ6ZMR3 332 aa24.34■■□□□ 1.49
LETM1-201ENST00000302787 XRCC6P12956 609 aaKnown RBP eCLIP24.34■■□□□ 1.49
LETM1-201ENST00000302787 TMX1Q9H3N1 280 aa24.34■■□□□ 1.49
LETM1-201ENST00000302787 ANKIB1Q9P2G1 1089 aa24.34■■□□□ 1.49
LETM1-201ENST00000302787 ATP8B2P98198 1209 aa24.34■■□□□ 1.49
LETM1-201ENST00000302787 RAB11FIP4Q86YS3 637 aa24.34■■□□□ 1.49
LETM1-201ENST00000302787 C16orf71Q8IYS4 520 aaPredicted RBP24.34■■□□□ 1.49
LETM1-201ENST00000302787 CEBPAP49715 358 aaPredicted RBP24.34■■□□□ 1.49
LETM1-201ENST00000302787 MICU3Q86XE3 530 aa24.34■■□□□ 1.49
LETM1-201ENST00000302787 JARID2Q92833 1246 aaPredicted RBP24.34■■□□□ 1.49
LETM1-201ENST00000302787 BRF1Q92994 677 aa24.34■■□□□ 1.49
LETM1-201ENST00000302787 RAB34Q9BZG1 259 aa24.34■■□□□ 1.49
LETM1-201ENST00000302787 USP48Q86UV5 1035 aa24.33■■□□□ 1.49
LETM1-201ENST00000302787 ANKRD24Q8TF21 1146 aa24.33■■□□□ 1.49
LETM1-201ENST00000302787 ANKRD18AQ8IVF6 992 aa24.33■■□□□ 1.49
LETM1-201ENST00000302787 FGFR1OPO95684 399 aaKnown RBP24.33■■□□□ 1.49
LETM1-201ENST00000302787 MCM3P25205 808 aa24.33■■□□□ 1.49
LETM1-201ENST00000302787 TMEM266Q2M3C6 531 aa24.33■■□□□ 1.49
LETM1-201ENST00000302787 KRT28Q7Z3Y7 464 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms