RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 KCNQ3O43525 872 aa18.82■□□□□ 0.6
UBAP1-201ENST00000297661 UBTFL1P0CB47 393 aaPredicted RBP18.82■□□□□ 0.6
UBAP1-201ENST00000297661 CBX1P83916 185 aa18.82■□□□□ 0.6
UBAP1-201ENST00000297661 CWC22Q9HCG8 908 aaKnown RBP18.82■□□□□ 0.6
UBAP1-201ENST00000297661 CHMLP26374 656 aa18.81■□□□□ 0.6
UBAP1-201ENST00000297661 SURF6O75683 361 aaKnown RBP18.8■□□□□ 0.6
UBAP1-201ENST00000297661 GCP02774 474 aa18.8■□□□□ 0.6
UBAP1-201ENST00000297661 PPP1R42Q7Z4L9 355 aa18.8■□□□□ 0.6
UBAP1-201ENST00000297661 PRIMPOLQ96LW4 560 aa18.79■□□□□ 0.6
UBAP1-201ENST00000297661 GTPBP4Q9BZE4 634 aaKnown RBP18.79■□□□□ 0.6
UBAP1-201ENST00000297661 NBPF7P0C2Y1 421 aaPredicted RBP18.79■□□□□ 0.6
UBAP1-201ENST00000297661 NBPF6Q5VWK0 638 aa18.79■□□□□ 0.6
UBAP1-201ENST00000297661 NBPF4Q96M43 638 aa18.79■□□□□ 0.6
UBAP1-201ENST00000297661 HTATSF1O43719 755 aaKnown RBP18.78■□□□□ 0.6
UBAP1-201ENST00000297661 DTNBO60941 627 aa18.78■□□□□ 0.6
UBAP1-201ENST00000297661 LARP6Q9BRS8 491 aaKnown RBP18.78■□□□□ 0.6
UBAP1-201ENST00000297661 CHPF2Q9P2E5 772 aa18.78■□□□□ 0.6
UBAP1-201ENST00000297661 TPRNQ4KMQ1 711 aa18.78■□□□□ 0.6
UBAP1-201ENST00000297661 ALS2Q96Q42 1657 aa18.77■□□□□ 0.6
UBAP1-201ENST00000297661 SRGAP3O43295 1099 aa18.77■□□□□ 0.59
UBAP1-201ENST00000297661 HMGN5P82970 282 aaKnown RBP18.77■□□□□ 0.59
UBAP1-201ENST00000297661 C8orf37Q96NL8 207 aa18.77■□□□□ 0.59
UBAP1-201ENST00000297661 JCADQ9P266 1359 aa18.76■□□□□ 0.59
UBAP1-201ENST00000297661 MED1Q15648 1581 aaPredicted RBP18.76■□□□□ 0.59
UBAP1-201ENST00000297661 ATP2B3Q16720 1220 aa18.76■□□□□ 0.59
UBAP1-201ENST00000297661 PPP4R3BQ5MIZ7 849 aa18.76■□□□□ 0.59
UBAP1-201ENST00000297661 MPNDQ8N594 471 aa18.76■□□□□ 0.59
UBAP1-201ENST00000297661 FAM208AQ9UK61 1670 aaKnown RBP18.76■□□□□ 0.59
UBAP1-201ENST00000297661 KIF20AO95235 890 aa18.76■□□□□ 0.59
UBAP1-201ENST00000297661 MBD3O95983 291 aa18.76■□□□□ 0.59
UBAP1-201ENST00000297661 GTF2F1P35269 517 aaKnown RBP eCLIP18.76■□□□□ 0.592e-6■■■■■ 81.7
UBAP1-201ENST00000297661 PI4KAP2A4QPH2 592 aa18.75■□□□□ 0.59
UBAP1-201ENST00000297661 MPRIPQ6WCQ1 1025 aa18.75■□□□□ 0.59
UBAP1-201ENST00000297661 PI4KAP1Q8N8J0 262 aa18.75■□□□□ 0.59
UBAP1-201ENST00000297661 SRCIN1Q9C0H9 1055 aa18.75■□□□□ 0.59
UBAP1-201ENST00000297661 TSPY26PQ9H489 355 aa18.75■□□□□ 0.59
UBAP1-201ENST00000297661 FAM177BA6PVY3 158 aa18.75■□□□□ 0.59
UBAP1-201ENST00000297661 SOS1Q07889 1333 aaPredicted RBP18.75■□□□□ 0.59
UBAP1-201ENST00000297661 MCCP23508 829 aa18.74■□□□□ 0.59
UBAP1-201ENST00000297661 PIBF1Q8WXW3 757 aa18.74■□□□□ 0.59
UBAP1-201ENST00000297661 ZNF830Q96NB3 372 aaPredicted RBP18.74■□□□□ 0.59
UBAP1-201ENST00000297661 NOLC1Q14978 699 aaKnown RBP eCLIP18.74■□□□□ 0.59
UBAP1-201ENST00000297661 MEX3CQ5U5Q3 659 aaKnown RBP18.74■□□□□ 0.59
UBAP1-201ENST00000297661 GDPD2Q9HCC8 539 aa18.74■□□□□ 0.59
UBAP1-201ENST00000297661 RHPN1Q8TCX5 695 aa18.73■□□□□ 0.59
UBAP1-201ENST00000297661 SSH3Q8TE77 659 aa18.73■□□□□ 0.59
UBAP1-201ENST00000297661 PRDM11Q9NQV5 511 aa18.73■□□□□ 0.59
UBAP1-201ENST00000297661 STAP2Q9UGK3 403 aa18.73■□□□□ 0.59
UBAP1-201ENST00000297661 KIF3AQ9Y496 699 aa18.73■□□□□ 0.59
UBAP1-201ENST00000297661 LETM1O95202 739 aaPredicted RBP18.73■□□□□ 0.59
UBAP1-201ENST00000297661 EIF4A1P60842 406 aaKnown RBP18.73■□□□□ 0.59
UBAP1-201ENST00000297661 LRP6O75581 1613 aa18.72■□□□□ 0.59
UBAP1-201ENST00000297661 AXIN2Q9Y2T1 843 aa18.72■□□□□ 0.59
UBAP1-201ENST00000297661 MARF1Q9Y4F3 1742 aaKnown RBP18.72■□□□□ 0.59
UBAP1-201ENST00000297661 LRRC37A3O60309 1634 aa18.72■□□□□ 0.59
UBAP1-201ENST00000297661 PRAMEF22A3QJZ6 481 aa18.71■□□□□ 0.59
UBAP1-201ENST00000297661 C17orf53Q8N3J3 647 aaPredicted RBP18.71■□□□□ 0.59
UBAP1-201ENST00000297661 ZNF530Q6P9A1 599 aaPredicted RBP18.7■□□□□ 0.58
UBAP1-201ENST00000297661 PI4K2BQ8TCG2 481 aa18.7■□□□□ 0.58
UBAP1-201ENST00000297661 SPG7Q9UQ90 795 aa18.7■□□□□ 0.58
UBAP1-201ENST00000297661 CPA1P15085 419 aa18.7■□□□□ 0.58
UBAP1-201ENST00000297661 OS9Q13438 667 aaPredicted RBP18.7■□□□□ 0.58
UBAP1-201ENST00000297661 CWC27Q6UX04 472 aaKnown RBP18.7■□□□□ 0.58
UBAP1-201ENST00000297661 DNAAF4Q8WXU2 420 aa18.7■□□□□ 0.58
UBAP1-201ENST00000297661 NGLY1Q96IV0 654 aa18.7■□□□□ 0.58
UBAP1-201ENST00000297661 STRN4Q9NRL3 753 aa18.7■□□□□ 0.58
UBAP1-201ENST00000297661 BTBD11A6QL63 1104 aa18.69■□□□□ 0.58
UBAP1-201ENST00000297661 TEFQ10587 303 aa18.69■□□□□ 0.58
UBAP1-201ENST00000297661 PROSER3Q2NL68 480 aa18.69■□□□□ 0.58
UBAP1-201ENST00000297661 IP6K1Q92551 441 aa18.69■□□□□ 0.58
UBAP1-201ENST00000297661 TTC12Q9H892 705 aaPredicted RBP18.69■□□□□ 0.58
UBAP1-201ENST00000297661 BCL2L12Q9HB09 334 aa18.69■□□□□ 0.58
UBAP1-201ENST00000297661 SPDYE4A6NLX3 237 aa18.69■□□□□ 0.58
UBAP1-201ENST00000297661 BEND3Q5T5X7 828 aa18.69■□□□□ 0.58
UBAP1-201ENST00000297661 BRD1O95696 1058 aa18.68■□□□□ 0.58
UBAP1-201ENST00000297661 BBXQ8WY36 941 aaPredicted RBP18.68■□□□□ 0.58
UBAP1-201ENST00000297661 CUL4AQ13619 759 aa18.68■□□□□ 0.58
UBAP1-201ENST00000297661 POLA2Q14181 598 aa18.68■□□□□ 0.58
UBAP1-201ENST00000297661 SYAP1Q96A49 352 aaPredicted RBP18.68■□□□□ 0.58
UBAP1-201ENST00000297661 PA2G4Q9UQ80 394 aaKnown RBP18.68■□□□□ 0.58
UBAP1-201ENST00000297661 RASEFQ8IZ41 740 aa18.67■□□□□ 0.58
UBAP1-201ENST00000297661 DDX54Q8TDD1 881 aaKnown RBP18.67■□□□□ 0.58
UBAP1-201ENST00000297661 BTG4Q9NY30 223 aa18.67■□□□□ 0.58
UBAP1-201ENST00000297661 TUBGCP6Q96RT7 1819 aa18.67■□□□□ 0.58
UBAP1-201ENST00000297661 PDCL2Q8N4E4 241 aa18.67■□□□□ 0.58
UBAP1-201ENST00000297661 USP25Q9UHP3 1055 aa18.67■□□□□ 0.58
UBAP1-201ENST00000297661 CWF19L2Q2TBE0 894 aaKnown RBP18.66■□□□□ 0.58
UBAP1-201ENST00000297661 CEMIPQ8WUJ3 1361 aa18.66■□□□□ 0.58
UBAP1-201ENST00000297661 GADD45BO75293 160 aaPredicted RBP18.66■□□□□ 0.58
UBAP1-201ENST00000297661 HSPA4P34932 840 aa18.66■□□□□ 0.58
UBAP1-201ENST00000297661 KCNH5Q8NCM2 988 aa18.66■□□□□ 0.58
UBAP1-201ENST00000297661 MCM2P49736 904 aa18.65■□□□□ 0.58
UBAP1-201ENST00000297661 ANAPC15P60006 121 aa18.65■□□□□ 0.58
UBAP1-201ENST00000297661 ARHGEF25Q86VW2 580 aa18.65■□□□□ 0.58
UBAP1-201ENST00000297661 KIF1BPQ96EK5 621 aa18.65■□□□□ 0.58
UBAP1-201ENST00000297661 PHRF1Q9P1Y6 1649 aaKnown RBP18.65■□□□□ 0.58
UBAP1-201ENST00000297661 SPTLC3Q9NUV7 552 aa18.65■□□□□ 0.58
UBAP1-201ENST00000297661 ADCY9O60503 1353 aa18.65■□□□□ 0.58
UBAP1-201ENST00000297661 RAB11FIP3O75154 756 aa18.65■□□□□ 0.58
UBAP1-201ENST00000297661 MAP3K2Q9Y2U5 619 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms