RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 LINS1Q8NG48 757 aa11.3□□□□□ -0.6
UBLCP1-201ENST00000296786 SLC52A2Q9HAB3 445 aa11.3□□□□□ -0.6
UBLCP1-201ENST00000296786 LMBRD1Q9NUN5 540 aa11.3□□□□□ -0.6
UBLCP1-201ENST00000296786 ABCC6O95255 1503 aa11.29□□□□□ -0.6
UBLCP1-201ENST00000296786 RAD50Q92878 1312 aa11.29□□□□□ -0.6
UBLCP1-201ENST00000296786 TMEM94Q12767 1356 aa11.29□□□□□ -0.6
UBLCP1-201ENST00000296786 GRM8O00222 908 aa11.29□□□□□ -0.6
UBLCP1-201ENST00000296786 CUL4AQ13619 759 aa11.29□□□□□ -0.6
UBLCP1-201ENST00000296786 XIRP1Q702N8 1843 aaKnown RBP11.29□□□□□ -0.6
UBLCP1-201ENST00000296786 LAMB4A4D0S4 1761 aa11.29□□□□□ -0.6
UBLCP1-201ENST00000296786 GLRX3O76003 335 aaKnown RBP11.28□□□□□ -0.6
UBLCP1-201ENST00000296786 PHKG2P15735 406 aa11.28□□□□□ -0.6
UBLCP1-201ENST00000296786 TATP17735 454 aaPredicted RBP11.28□□□□□ -0.6
UBLCP1-201ENST00000296786 NFATC2IPQ8NCF5 419 aa11.28□□□□□ -0.6
UBLCP1-201ENST00000296786 HDAC5Q9UQL6 1122 aa11.28□□□□□ -0.6
UBLCP1-201ENST00000296786 DCCP43146 1447 aa11.28□□□□□ -0.6
UBLCP1-201ENST00000296786 UTYO14607 1347 aa11.28□□□□□ -0.6
UBLCP1-201ENST00000296786 CWC27Q6UX04 472 aaKnown RBP11.28□□□□□ -0.6
UBLCP1-201ENST00000296786 KAZALD1Q96I82 304 aa11.28□□□□□ -0.6
UBLCP1-201ENST00000296786 SUCLG2Q96I99 432 aa11.28□□□□□ -0.6
UBLCP1-201ENST00000296786 BICC1Q9H694 974 aaKnown RBP11.28□□□□□ -0.6
UBLCP1-201ENST00000296786 MYL6BP14649 208 aa11.27□□□□□ -0.6
UBLCP1-201ENST00000296786 ERC1Q8IUD2 1116 aa11.27□□□□□ -0.6
UBLCP1-201ENST00000296786 CABLES1Q8TDN4 633 aa11.27□□□□□ -0.6
UBLCP1-201ENST00000296786 INTS4Q96HW7 963 aaKnown RBP11.27□□□□□ -0.6
UBLCP1-201ENST00000296786 LSG1Q9H089 658 aaKnown RBP11.27□□□□□ -0.6
UBLCP1-201ENST00000296786 SPG7Q9UQ90 795 aa11.27□□□□□ -0.6
UBLCP1-201ENST00000296786 MRC1P22897 1456 aa11.27□□□□□ -0.61
UBLCP1-201ENST00000296786 PARP4Q9UKK3 1724 aaKnown RBP11.27□□□□□ -0.61
UBLCP1-201ENST00000296786 TNS3Q68CZ2 1445 aa11.27□□□□□ -0.61
UBLCP1-201ENST00000296786 IGKV5-2P06315 115 aa11.27□□□□□ -0.61
UBLCP1-201ENST00000296786 FOXD4L5Q5VV16 416 aaPredicted RBP11.27□□□□□ -0.61
UBLCP1-201ENST00000296786 RIC3Q7Z5B4 369 aa11.27□□□□□ -0.61
UBLCP1-201ENST00000296786 FOXD4L4Q8WXT5 416 aaPredicted RBP11.27□□□□□ -0.61
UBLCP1-201ENST00000296786 ECHDC1Q9NTX5 307 aa11.27□□□□□ -0.61
UBLCP1-201ENST00000296786 IFIT2P09913 472 aaKnown RBP11.26□□□□□ -0.61
UBLCP1-201ENST00000296786 CSB-PGBD3P0DP91 1061 aa11.26□□□□□ -0.61
UBLCP1-201ENST00000296786 IFNL2Q8IZJ0 200 aa11.26□□□□□ -0.61
UBLCP1-201ENST00000296786 CHAMP1Q96JM3 812 aa11.26□□□□□ -0.61
UBLCP1-201ENST00000296786 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.26□□□□□ -0.61
UBLCP1-201ENST00000296786 SNX14Q9Y5W7 946 aa11.26□□□□□ -0.61
UBLCP1-201ENST00000296786 PRPF40AO75400 957 aaKnown RBP11.26□□□□□ -0.61
UBLCP1-201ENST00000296786 NCLP19338 710 aaKnown RBP11.26□□□□□ -0.61
UBLCP1-201ENST00000296786 CHRNA2Q15822 529 aa11.26□□□□□ -0.61
UBLCP1-201ENST00000296786 CAVIN1Q6NZI2 390 aaKnown RBP11.26□□□□□ -0.61
UBLCP1-201ENST00000296786 AACSQ86V21 672 aa11.26□□□□□ -0.61
UBLCP1-201ENST00000296786 GPATCH3Q96I76 525 aa11.26□□□□□ -0.61
UBLCP1-201ENST00000296786 ZNF496Q96IT1 587 aaPredicted RBP11.26□□□□□ -0.61
UBLCP1-201ENST00000296786 RRAGDQ9NQL2 400 aaPredicted RBP11.26□□□□□ -0.61
UBLCP1-201ENST00000296786 SASH1O94885 1247 aa11.25□□□□□ -0.61
UBLCP1-201ENST00000296786 BRD1O95696 1058 aa11.25□□□□□ -0.61
UBLCP1-201ENST00000296786 LARP1Q6PKG0 1096 aaKnown RBP11.25□□□□□ -0.61
UBLCP1-201ENST00000296786 KIAA1211Q6ZU35 1233 aa11.25□□□□□ -0.61
UBLCP1-201ENST00000296786 XAGE3Q8WTP9 111 aa11.25□□□□□ -0.61
UBLCP1-201ENST00000296786 DIAPH3Q9NSV4 1193 aa11.25□□□□□ -0.61
UBLCP1-201ENST00000296786 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.25□□□□□ -0.61
UBLCP1-201ENST00000296786 GLI3P10071 1580 aa11.25□□□□□ -0.61
UBLCP1-201ENST00000296786 NEURL1BA8MQ27 555 aa11.25□□□□□ -0.61
UBLCP1-201ENST00000296786 NEXNQ0ZGT2 675 aa11.25□□□□□ -0.61
UBLCP1-201ENST00000296786 COPS6Q7L5N1 327 aa11.25□□□□□ -0.61
UBLCP1-201ENST00000296786 RASEFQ8IZ41 740 aa11.25□□□□□ -0.61
UBLCP1-201ENST00000296786 CYP27B1O15528 508 aa11.24□□□□□ -0.61
UBLCP1-201ENST00000296786 G3BP1Q13283 466 aaKnown RBP eCLIP11.24□□□□□ -0.61
UBLCP1-201ENST00000296786 ZSCAN23Q3MJ62 389 aa11.24□□□□□ -0.61
UBLCP1-201ENST00000296786 GPT2Q8TD30 523 aa11.24□□□□□ -0.61
UBLCP1-201ENST00000296786 GCKRQ14397 625 aa11.24□□□□□ -0.61
UBLCP1-201ENST00000296786 TTC5Q8N0Z6 440 aa11.24□□□□□ -0.61
UBLCP1-201ENST00000296786 RUFY2Q8WXA3 655 aa11.24□□□□□ -0.61
UBLCP1-201ENST00000296786 EAF2Q96CJ1 260 aaPredicted RBP11.24□□□□□ -0.61
UBLCP1-201ENST00000296786 DCAF5Q96JK2 942 aa11.24□□□□□ -0.61
UBLCP1-201ENST00000296786 TTC14Q96N46 770 aa11.24□□□□□ -0.61
UBLCP1-201ENST00000296786 MYD88Q99836 296 aa11.24□□□□□ -0.61
UBLCP1-201ENST00000296786 SIL1Q9H173 461 aa11.24□□□□□ -0.61
UBLCP1-201ENST00000296786 USP16Q9Y5T5 823 aa11.24□□□□□ -0.61
UBLCP1-201ENST00000296786 UBR2Q8IWV8 1755 aa11.23□□□□□ -0.61
UBLCP1-201ENST00000296786 PIP4K2AP48426 406 aaPredicted RBP11.23□□□□□ -0.61
UBLCP1-201ENST00000296786 ZNF445P59923 1031 aa11.23□□□□□ -0.61
UBLCP1-201ENST00000296786 CADPS2Q86UW7 1296 aa11.23□□□□□ -0.61
UBLCP1-201ENST00000296786 KLHDC4Q8TBB5 520 aa11.23□□□□□ -0.61
UBLCP1-201ENST00000296786 EVI5LQ96CN4 794 aa11.23□□□□□ -0.61
UBLCP1-201ENST00000296786 METTL22Q9BUU2 404 aaPredicted RBP11.23□□□□□ -0.61
UBLCP1-201ENST00000296786 PLEKHG2Q9H7P9 1386 aa11.23□□□□□ -0.61
UBLCP1-201ENST00000296786 SNRPA1P09661 255 aaKnown RBP11.23□□□□□ -0.61
UBLCP1-201ENST00000296786 PTH1RQ03431 593 aa11.23□□□□□ -0.61
UBLCP1-201ENST00000296786 NUP188Q5SRE5 1749 aa11.23□□□□□ -0.61
UBLCP1-201ENST00000296786 LRP10Q7Z4F1 713 aa11.23□□□□□ -0.61
UBLCP1-201ENST00000296786 CCDC8Q9H0W5 538 aaPredicted RBP11.23□□□□□ -0.61
UBLCP1-201ENST00000296786 SPATA31A3Q5VYP0 1347 aa11.22□□□□□ -0.61
UBLCP1-201ENST00000296786 AK2P54819 239 aa11.22□□□□□ -0.61
UBLCP1-201ENST00000296786 EPHA10Q5JZY3 1008 aa11.22□□□□□ -0.61
UBLCP1-201ENST00000296786 ANKRD13DQ6ZTN6 518 aa11.22□□□□□ -0.61
UBLCP1-201ENST00000296786 FMNL2Q96PY5 1086 aa11.22□□□□□ -0.61
UBLCP1-201ENST00000296786 TLR7Q9NYK1 1049 aaKnown RBP11.22□□□□□ -0.61
UBLCP1-201ENST00000296786 RBM27Q9P2N5 1060 aaKnown RBP11.22□□□□□ -0.61
UBLCP1-201ENST00000296786 CASTP20810 708 aaKnown RBP11.21□□□□□ -0.61
UBLCP1-201ENST00000296786 NASPP49321 788 aaPredicted RBP11.21□□□□□ -0.61
UBLCP1-201ENST00000296786 CPDO75976 1380 aa11.21□□□□□ -0.61
UBLCP1-201ENST00000296786 SHANK3Q9BYB0 1731 aa11.21□□□□□ -0.61
UBLCP1-201ENST00000296786 CPA1P15085 419 aa11.21□□□□□ -0.62
UBLCP1-201ENST00000296786 RUFY3Q7L099 469 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms