RNA–Protein interactions for RNA: ENST00000278426.7

SLC43A1-201, Transcript of solute carrier family 43 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC43A1, Length 2,598 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1-201ENST00000278426 LSG1Q9H089 658 aaKnown RBP21.56■■□□□ 1.04
SLC43A1-201ENST00000278426 CHPF2Q9P2E5 772 aa21.56■■□□□ 1.04
SLC43A1-201ENST00000278426 LARGE1O95461 756 aa21.55■■□□□ 1.04
SLC43A1-201ENST00000278426 LGR6Q9HBX8 967 aa21.55■■□□□ 1.04
SLC43A1-201ENST00000278426 PIK3C2AO00443 1686 aa21.55■■□□□ 1.04
SLC43A1-201ENST00000278426 F13A1P00488 732 aa21.55■■□□□ 1.04
SLC43A1-201ENST00000278426 CBX1P83916 185 aa21.55■■□□□ 1.04
SLC43A1-201ENST00000278426 FUCA2Q9BTY2 467 aa21.55■■□□□ 1.04
SLC43A1-201ENST00000278426 KCNF1Q9H3M0 494 aa21.55■■□□□ 1.04
SLC43A1-201ENST00000278426 PYCARDQ9ULZ3 195 aa21.55■■□□□ 1.04
SLC43A1-201ENST00000278426 KCNQ3O43525 872 aa21.54■■□□□ 1.04
SLC43A1-201ENST00000278426 CNTROBQ8N137 903 aa21.54■■□□□ 1.04
SLC43A1-201ENST00000278426 LRRC37A3O60309 1634 aa21.54■■□□□ 1.04
SLC43A1-201ENST00000278426 SPC24Q8NBT2 197 aa21.53■■□□□ 1.04
SLC43A1-201ENST00000278426 KIF3AQ9Y496 699 aa21.53■■□□□ 1.04
SLC43A1-201ENST00000278426 LETM1O95202 739 aaPredicted RBP21.53■■□□□ 1.04
SLC43A1-201ENST00000278426 OS9Q13438 667 aaPredicted RBP21.53■■□□□ 1.04
SLC43A1-201ENST00000278426 ATP2B3Q16720 1220 aa21.53■■□□□ 1.04
SLC43A1-201ENST00000278426 BCL2L12Q9HB09 334 aa21.53■■□□□ 1.04
SLC43A1-201ENST00000278426 BABAM1Q9NWV8 329 aa21.53■■□□□ 1.04
SLC43A1-201ENST00000278426 SMC3Q9UQE7 1217 aa21.53■■□□□ 1.04
SLC43A1-201ENST00000278426 CACNA1FO60840 1977 aa21.53■■□□□ 1.04
SLC43A1-201ENST00000278426 NWD1Q149M9 1564 aa21.52■■□□□ 1.04
SLC43A1-201ENST00000278426 PXDNLA1KZ92 1463 aa21.52■■□□□ 1.04
SLC43A1-201ENST00000278426 ZSCAN20P17040 1043 aaPredicted RBP21.52■■□□□ 1.04
SLC43A1-201ENST00000278426 DNM1Q05193 864 aaKnown RBP21.52■■□□□ 1.04
SLC43A1-201ENST00000278426 BEND3Q5T5X7 828 aa21.52■■□□□ 1.04
SLC43A1-201ENST00000278426 LIMCH1Q9UPQ0 1083 aa21.52■■□□□ 1.04
SLC43A1-201ENST00000278426 EPB41L2O43491 1005 aaKnown RBP21.52■■□□□ 1.04
SLC43A1-201ENST00000278426 PPP4R3BQ5MIZ7 849 aa21.52■■□□□ 1.04
SLC43A1-201ENST00000278426 DNAAF4Q8WXU2 420 aa21.52■■□□□ 1.04
SLC43A1-201ENST00000278426 CASTP20810 708 aaKnown RBP21.51■■□□□ 1.03
SLC43A1-201ENST00000278426 EIF4A1P60842 406 aaKnown RBP21.51■■□□□ 1.03
SLC43A1-201ENST00000278426 TBX22Q9Y458 520 aa21.51■■□□□ 1.03
SLC43A1-201ENST00000278426 DIP2AQ14689 1571 aa21.51■■□□□ 1.03
SLC43A1-201ENST00000278426 CCDC83Q8IWF9 413 aa21.5■■□□□ 1.03
SLC43A1-201ENST00000278426 KIAA1524Q8TCG1 905 aa21.5■■□□□ 1.03
SLC43A1-201ENST00000278426 DMTNQ08495 405 aa21.5■■□□□ 1.03
SLC43A1-201ENST00000278426 DDX54Q8TDD1 881 aaKnown RBP21.5■■□□□ 1.03
SLC43A1-201ENST00000278426 PTH1RQ03431 593 aa21.49■■□□□ 1.03
SLC43A1-201ENST00000278426 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.49■■□□□ 1.03
SLC43A1-201ENST00000278426 GJB2P29033 226 aa21.48■■□□□ 1.03
SLC43A1-201ENST00000278426 DIAPH3Q9NSV4 1193 aa21.48■■□□□ 1.03
SLC43A1-201ENST00000278426 RIOK3O14730 519 aaKnown RBP21.48■■□□□ 1.03
SLC43A1-201ENST00000278426 ADCK5Q3MIX3 580 aa21.48■■□□□ 1.03
SLC43A1-201ENST00000278426 NBPF6Q5VWK0 638 aa21.48■■□□□ 1.03
SLC43A1-201ENST00000278426 NBPF4Q96M43 638 aa21.48■■□□□ 1.03
SLC43A1-201ENST00000278426 MTMR6Q9Y217 621 aa21.48■■□□□ 1.03
SLC43A1-201ENST00000278426 SETD1BQ9UPS6 1966 aaKnown RBP21.47■■□□□ 1.03
SLC43A1-201ENST00000278426 KCNA6P17658 529 aa21.47■■□□□ 1.03
SLC43A1-201ENST00000278426 PRPF40BQ6NWY9 871 aaKnown RBP21.47■■□□□ 1.03
SLC43A1-201ENST00000278426 HYPKQ9NX55 129 aa21.47■■□□□ 1.03
SLC43A1-201ENST00000278426 PA2G4Q9UQ80 394 aaKnown RBP21.47■■□□□ 1.03
SLC43A1-201ENST00000278426 GLRX3O76003 335 aaKnown RBP21.46■■□□□ 1.03
SLC43A1-201ENST00000278426 JAKMIP1Q96N16 626 aaKnown RBP21.46■■□□□ 1.03
SLC43A1-201ENST00000278426 CHMP3Q9Y3E7 222 aa21.46■■□□□ 1.03
SLC43A1-201ENST00000278426 SPDYE4A6NLX3 237 aa21.46■■□□□ 1.03
SLC43A1-201ENST00000278426 CEMIPQ8WUJ3 1361 aa21.46■■□□□ 1.03
SLC43A1-201ENST00000278426 HSP90AB4PQ58FF6 505 aa21.45■■□□□ 1.03
SLC43A1-201ENST00000278426 CLASRPQ8N2M8 674 aaKnown RBP21.45■■□□□ 1.03
SLC43A1-201ENST00000278426 VPS37CA5D8V6 355 aaPredicted RBP21.45■■□□□ 1.02
SLC43A1-201ENST00000278426 MPRIPQ6WCQ1 1025 aa21.45■■□□□ 1.02
SLC43A1-201ENST00000278426 ATP6V1DQ9Y5K8 247 aa21.45■■□□□ 1.02
SLC43A1-201ENST00000278426 ST3GAL1Q11201 340 aa21.44■■□□□ 1.02
SLC43A1-201ENST00000278426 PDRG1Q9NUG6 133 aa21.44■■□□□ 1.02
SLC43A1-201ENST00000278426 ADCY9O60503 1353 aa21.44■■□□□ 1.02
SLC43A1-201ENST00000278426 BTBD11A6QL63 1104 aa21.44■■□□□ 1.02
SLC43A1-201ENST00000278426 UTP14CQ5TAP6 766 aaKnown RBP21.44■■□□□ 1.02
SLC43A1-201ENST00000278426 N4BP2Q86UW6 1770 aaPredicted RBP21.44■■□□□ 1.02
SLC43A1-201ENST00000278426 TEFQ10587 303 aa21.43■■□□□ 1.02
SLC43A1-201ENST00000278426 PDCL2Q8N4E4 241 aa21.43■■□□□ 1.02
SLC43A1-201ENST00000278426 C9orf78Q9NZ63 289 aaPredicted RBP21.43■■□□□ 1.02
SLC43A1-201ENST00000278426 TTC41PQ6P2S7 1318 aa21.43■■□□□ 1.02
SLC43A1-201ENST00000278426 PTGS1P23219 599 aa21.43■■□□□ 1.02
SLC43A1-201ENST00000278426 NECAB1Q8N987 351 aa21.43■■□□□ 1.02
SLC43A1-201ENST00000278426 RUFY2Q8WXA3 655 aa21.43■■□□□ 1.02
SLC43A1-201ENST00000278426 RBM33Q96EV2 1170 aaKnown RBP21.43■■□□□ 1.02
SLC43A1-201ENST00000278426 ECHDC1Q9NTX5 307 aa21.43■■□□□ 1.02
SLC43A1-201ENST00000278426 MAP3K2Q9Y2U5 619 aa21.43■■□□□ 1.02
SLC43A1-201ENST00000278426 CAMK4Q16566 473 aa21.42■■□□□ 1.02
SLC43A1-201ENST00000278426 PROSER3Q2NL68 480 aa21.42■■□□□ 1.02
SLC43A1-201ENST00000278426 FAM173BQ6P4H8 233 aa21.42■■□□□ 1.02
SLC43A1-201ENST00000278426 LRRC59Q96AG4 307 aaKnown RBP21.42■■□□□ 1.02
SLC43A1-201ENST00000278426 USP42Q9H9J4 1324 aaKnown RBP21.42■■□□□ 1.02
SLC43A1-201ENST00000278426 IFIT2P09913 472 aaKnown RBP21.42■■□□□ 1.02
SLC43A1-201ENST00000278426 CWF19L2Q2TBE0 894 aaKnown RBP21.42■■□□□ 1.02
SLC43A1-201ENST00000278426 IP6K1Q92551 441 aa21.42■■□□□ 1.02
SLC43A1-201ENST00000278426 U2AF2P26368 475 aaKnown RBP eCLIP21.41■■□□□ 1.02
SLC43A1-201ENST00000278426 CYP46A1Q9Y6A2 500 aa21.41■■□□□ 1.02
SLC43A1-201ENST00000278426 CCDC192P0DO97 292 aa21.41■■□□□ 1.02
SLC43A1-201ENST00000278426 COL9A3Q14050 684 aaPredicted RBP21.41■■□□□ 1.02
SLC43A1-201ENST00000278426 ZNF530Q6P9A1 599 aaPredicted RBP21.41■■□□□ 1.02
SLC43A1-201ENST00000278426 TTC6Q86TZ1 520 aa21.41■■□□□ 1.02
SLC43A1-201ENST00000278426 FERMT3Q86UX7 667 aa21.41■■□□□ 1.02
SLC43A1-201ENST00000278426 LUZP1Q86V48 1076 aa21.41■■□□□ 1.02
SLC43A1-201ENST00000278426 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.41■■□□□ 1.02
SLC43A1-201ENST00000278426 LIG1P18858 919 aa21.4■■□□□ 1.02
SLC43A1-201ENST00000278426 ME3Q16798 604 aa21.4■■□□□ 1.02
SLC43A1-201ENST00000278426 VPS53Q5VIR6 699 aa21.4■■□□□ 1.02
SLC43A1-201ENST00000278426 AACSQ86V21 672 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms