RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 TTC37Q6PGP7 1564 aa16.16■□□□□ 0.18
NPC1-201ENST00000269228 LETM1O95202 739 aaPredicted RBP16.15■□□□□ 0.18
NPC1-201ENST00000269228 ANKRD18AQ8IVF6 992 aa16.15■□□□□ 0.18
NPC1-201ENST00000269228 FERMT3Q86UX7 667 aa16.15■□□□□ 0.18
NPC1-201ENST00000269228 NASPP49321 788 aaPredicted RBP16.15■□□□□ 0.18
NPC1-201ENST00000269228 TTF1Q15361 905 aaPredicted RBP16.15■□□□□ 0.18
NPC1-201ENST00000269228 PDILTQ8N807 584 aa16.15■□□□□ 0.18
NPC1-201ENST00000269228 BMP2KLQ5H9B9 411 aa16.15■□□□□ 0.18
NPC1-201ENST00000269228 ANKRD44Q8N8A2 993 aa16.15■□□□□ 0.18
NPC1-201ENST00000269228 A0A0U1RQG5 324 aaPredicted RBP16.15■□□□□ 0.18
NPC1-201ENST00000269228 PLEKHG3A1L390 1219 aa16.15■□□□□ 0.18
NPC1-201ENST00000269228 TBC1D9Q6ZT07 1266 aa16.15■□□□□ 0.18
NPC1-201ENST00000269228 SLF2Q8IX21 1173 aa16.15■□□□□ 0.18
NPC1-201ENST00000269228 ZNF444Q8N0Y2 327 aaPredicted RBP16.15■□□□□ 0.18
NPC1-201ENST00000269228 CCDC82Q8N4S0 544 aa16.15■□□□□ 0.18
NPC1-201ENST00000269228 WASF1Q92558 559 aa16.15■□□□□ 0.18
NPC1-201ENST00000269228 SPATA32Q96LK8 384 aa16.15■□□□□ 0.18
NPC1-201ENST00000269228 ATP8B2P98198 1209 aa16.14■□□□□ 0.17
NPC1-201ENST00000269228 HDAC1Q13547 482 aaPredicted RBP16.14■□□□□ 0.17
NPC1-201ENST00000269228 TRIM5Q9C035 493 aa16.14■□□□□ 0.17
NPC1-201ENST00000269228 PHAXQ9H814 394 aaKnown RBP16.14■□□□□ 0.17
NPC1-201ENST00000269228 IQSEC3Q9UPP2 1182 aaPredicted RBP16.14■□□□□ 0.17
NPC1-201ENST00000269228 TMEM132AQ24JP5 1023 aa16.14■□□□□ 0.17
NPC1-201ENST00000269228 TTC22Q5TAA0 569 aa16.14■□□□□ 0.17
NPC1-201ENST00000269228 UTP14AQ9BVJ6 771 aaKnown RBP16.14■□□□□ 0.17
NPC1-201ENST00000269228 ZHX3Q9H4I2 956 aa16.14■□□□□ 0.17
NPC1-201ENST00000269228 RTCBQ9Y3I0 505 aaKnown RBP16.14■□□□□ 0.17
NPC1-201ENST00000269228 ATP2B3Q16720 1220 aa16.13■□□□□ 0.17
NPC1-201ENST00000269228 IQCA1Q86XH1 822 aa16.13■□□□□ 0.17
NPC1-201ENST00000269228 PA2G4Q9UQ80 394 aaKnown RBP16.13■□□□□ 0.17
NPC1-201ENST00000269228 TSPY26PQ9H489 355 aa16.13■□□□□ 0.17
NPC1-201ENST00000269228 PTPRTO14522 1441 aa16.13■□□□□ 0.17
NPC1-201ENST00000269228 OFD1O75665 1012 aa16.13■□□□□ 0.17
NPC1-201ENST00000269228 LDHCP07864 332 aa16.13■□□□□ 0.17
NPC1-201ENST00000269228 TFCP2L1Q9NZI6 479 aa16.13■□□□□ 0.17
NPC1-201ENST00000269228 FAM13BQ9NYF5 915 aa16.12■□□□□ 0.17
NPC1-201ENST00000269228 CFAP45Q9UL16 551 aa16.12■□□□□ 0.17
NPC1-201ENST00000269228 ZCCHC11Q5TAX3 1644 aaKnown RBP16.12■□□□□ 0.17
NPC1-201ENST00000269228 UQCRFS1P1P0C7P4 283 aa16.12■□□□□ 0.17
NPC1-201ENST00000269228 MRE11P49959 708 aa16.12■□□□□ 0.17
NPC1-201ENST00000269228 HAND2P61296 217 aa16.12■□□□□ 0.17
NPC1-201ENST00000269228 LARP6Q9BRS8 491 aaKnown RBP16.12■□□□□ 0.17
NPC1-201ENST00000269228 RNF41Q9H4P4 317 aaPredicted RBP16.12■□□□□ 0.17
NPC1-201ENST00000269228 CTCFLQ8NI51 663 aaPredicted RBP16.12■□□□□ 0.17
NPC1-201ENST00000269228 LGR6Q9HBX8 967 aa16.12■□□□□ 0.17
NPC1-201ENST00000269228 IFIT3O14879 490 aaKnown RBP16.12■□□□□ 0.17
NPC1-201ENST00000269228 HMGB1P09429 215 aaKnown RBP16.12■□□□□ 0.17
NPC1-201ENST00000269228 RLBP1P12271 317 aa16.12■□□□□ 0.17
NPC1-201ENST00000269228 NUCB1Q02818 461 aa16.12■□□□□ 0.17
NPC1-201ENST00000269228 TNMDQ9H2S6 317 aa16.12■□□□□ 0.17
NPC1-201ENST00000269228 CIZ1Q9ULV3 898 aaPredicted RBP16.12■□□□□ 0.17
NPC1-201ENST00000269228 NPC1L1Q9UHC9 1359 aa16.12■□□□□ 0.17
NPC1-201ENST00000269228 ZNF790Q6PG37 636 aa16.11■□□□□ 0.17
NPC1-201ENST00000269228 GCC2Q8IWJ2 1684 aa16.11■□□□□ 0.17
NPC1-201ENST00000269228 SMC2O95347 1197 aa16.11■□□□□ 0.17
NPC1-201ENST00000269228 ZNF76P36508 570 aa16.11■□□□□ 0.17
NPC1-201ENST00000269228 ERCC6L2Q5T890 1561 aa16.11■□□□□ 0.17
NPC1-201ENST00000269228 NAP1L1P55209 391 aaKnown RBP16.11■□□□□ 0.17
NPC1-201ENST00000269228 SSBP05455 408 aaKnown RBP eCLIP16.11■□□□□ 0.17
NPC1-201ENST00000269228 BRPF1P55201 1214 aaPredicted RBP16.11■□□□□ 0.17
NPC1-201ENST00000269228 IL15P40933 162 aaPredicted RBP16.1■□□□□ 0.17
NPC1-201ENST00000269228 TPTE2Q6XPS3 522 aa16.1■□□□□ 0.17
NPC1-201ENST00000269228 SLC12A7Q9Y666 1083 aa16.1■□□□□ 0.17
NPC1-201ENST00000269228 ARHGEF10O15013 1369 aa16.1■□□□□ 0.17
NPC1-201ENST00000269228 SLC4A8Q2Y0W8 1093 aa16.1■□□□□ 0.17
NPC1-201ENST00000269228 PRM3Q9NNZ6 103 aa16.1■□□□□ 0.17
NPC1-201ENST00000269228 DDX21Q9NR30 783 aaKnown RBP eCLIP16.1■□□□□ 0.17
NPC1-201ENST00000269228 SEC63Q9UGP8 760 aaKnown RBP16.1■□□□□ 0.17
NPC1-201ENST00000269228 MLH3Q9UHC1 1453 aa16.1■□□□□ 0.17
NPC1-201ENST00000269228 CCDC196A0A1B0GTZ2 297 aa16.1■□□□□ 0.17
NPC1-201ENST00000269228 CDCA7Q9BWT1 371 aaPredicted RBP16.1■□□□□ 0.17
NPC1-201ENST00000269228 BAG3O95817 575 aa16.1■□□□□ 0.17
NPC1-201ENST00000269228 IRS4O14654 1257 aaPredicted RBP16.09■□□□□ 0.17
NPC1-201ENST00000269228 PDE1AP54750 535 aa16.09■□□□□ 0.17
NPC1-201ENST00000269228 SPTY2D1Q68D10 685 aaPredicted RBP16.09■□□□□ 0.17
NPC1-201ENST00000269228 GOLGA6L1Q8N7Z2 621 aa16.09■□□□□ 0.17
NPC1-201ENST00000269228 METP08581 1390 aa16.09■□□□□ 0.17
NPC1-201ENST00000269228 FAM98CQ17RN3 349 aaKnown RBP16.09■□□□□ 0.17
NPC1-201ENST00000269228 CCDC96Q2M329 555 aa16.09■□□□□ 0.17
NPC1-201ENST00000269228 G2E3Q7L622 706 aa16.09■□□□□ 0.17
NPC1-201ENST00000269228 SH2B1Q9NRF2 756 aaPredicted RBP16.09■□□□□ 0.17
NPC1-201ENST00000269228 MAGEC2Q9UBF1 373 aaPredicted RBP16.09■□□□□ 0.17
NPC1-201ENST00000269228 CCT2P78371 535 aaKnown RBP16.09■□□□□ 0.17
NPC1-201ENST00000269228 GNPATO15228 680 aa16.08■□□□□ 0.17
NPC1-201ENST00000269228 SDSP20132 328 aa16.08■□□□□ 0.17
NPC1-201ENST00000269228 LIMCH1Q9UPQ0 1083 aa16.08■□□□□ 0.17
NPC1-201ENST00000269228 GUCY1B3Q02153 619 aa16.08■□□□□ 0.16
NPC1-201ENST00000269228 GOLGA8BA8MQT2 603 aa16.08■□□□□ 0.16
NPC1-201ENST00000269228 FILIP1LQ4L180 1135 aa16.08■□□□□ 0.16
NPC1-201ENST00000269228 CCDC70Q6NSX1 233 aa16.08■□□□□ 0.16
NPC1-201ENST00000269228 C16orf71Q8IYS4 520 aaPredicted RBP16.08■□□□□ 0.16
NPC1-201ENST00000269228 HELBQ8NG08 1087 aaPredicted RBP16.08■□□□□ 0.16
NPC1-201ENST00000269228 NYXQ9GZU5 481 aa16.08■□□□□ 0.16
NPC1-201ENST00000269228 EFCAB6Q5THR3 1501 aa16.08■□□□□ 0.16
NPC1-201ENST00000269228 CCDC192P0DO97 292 aa16.08■□□□□ 0.16
NPC1-201ENST00000269228 CT47A1Q5JQC4 288 aaPredicted RBP16.07■□□□□ 0.16
NPC1-201ENST00000269228 WWC3Q9ULE0 1092 aa16.07■□□□□ 0.16
NPC1-201ENST00000269228 UGGT1Q9NYU2 1555 aa16.07■□□□□ 0.16
NPC1-201ENST00000269228 GOLGA8AA7E2F4 631 aa16.07■□□□□ 0.16
NPC1-201ENST00000269228 C8orf76Q96K31 380 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms