RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 UTYO14607 1347 aa25.53■■□□□ 1.68
LYSMD2-201ENST00000267838 PLBD2Q8NHP8 589 aa25.53■■□□□ 1.68
LYSMD2-201ENST00000267838 RBM42Q9BTD8 480 aaKnown RBP25.53■■□□□ 1.68
LYSMD2-201ENST00000267838 NEURL1BA8MQ27 555 aa25.52■■□□□ 1.68
LYSMD2-201ENST00000267838 APBB1O00213 710 aa25.52■■□□□ 1.68
LYSMD2-201ENST00000267838 GRM8O00222 908 aa25.52■■□□□ 1.68
LYSMD2-201ENST00000267838 PPP1R42Q7Z4L9 355 aa25.52■■□□□ 1.68
LYSMD2-201ENST00000267838 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.52■■□□□ 1.68
LYSMD2-201ENST00000267838 POLA2Q14181 598 aa25.51■■□□□ 1.67
LYSMD2-201ENST00000267838 EXOC6BQ9Y2D4 811 aa25.51■■□□□ 1.67
LYSMD2-201ENST00000267838 SMARCA5O60264 1052 aaPredicted RBP25.51■■□□□ 1.67
LYSMD2-201ENST00000267838 FAM98CQ17RN3 349 aaKnown RBP25.51■■□□□ 1.67
LYSMD2-201ENST00000267838 DNAJC10Q8IXB1 793 aa25.51■■□□□ 1.67
LYSMD2-201ENST00000267838 AFDNP55196 1824 aaKnown RBP25.5■■□□□ 1.67
LYSMD2-201ENST00000267838 NUP188Q5SRE5 1749 aa25.5■■□□□ 1.67
LYSMD2-201ENST00000267838 BMP2KLQ5H9B9 411 aa25.49■■□□□ 1.67
LYSMD2-201ENST00000267838 PLEKHM2Q8IWE5 1019 aa25.49■■□□□ 1.67
LYSMD2-201ENST00000267838 USP21Q9UK80 565 aa25.49■■□□□ 1.67
LYSMD2-201ENST00000267838 SRGAP3O43295 1099 aa25.49■■□□□ 1.67
LYSMD2-201ENST00000267838 GCKRQ14397 625 aa25.49■■□□□ 1.67
LYSMD2-201ENST00000267838 C16orf71Q8IYS4 520 aaPredicted RBP25.49■■□□□ 1.67
LYSMD2-201ENST00000267838 STARD3NLO95772 234 aa25.48■■□□□ 1.67
LYSMD2-201ENST00000267838 MTX1Q13505 466 aa25.48■■□□□ 1.67
LYSMD2-201ENST00000267838 TTLL7Q6ZT98 887 aa25.48■■□□□ 1.67
LYSMD2-201ENST00000267838 ACSBG1Q96GR2 724 aa25.46■■□□□ 1.67
LYSMD2-201ENST00000267838 SLC4A9Q96Q91 983 aa25.46■■□□□ 1.67
LYSMD2-201ENST00000267838 LRRCC1Q9C099 1032 aa25.46■■□□□ 1.67
LYSMD2-201ENST00000267838 SEC24BO95487 1268 aa25.46■■□□□ 1.67
LYSMD2-201ENST00000267838 SUCLG2Q96I99 432 aa25.46■■□□□ 1.67
LYSMD2-201ENST00000267838 MEX3CQ5U5Q3 659 aaKnown RBP25.45■■□□□ 1.66
LYSMD2-201ENST00000267838 TJP1Q07157 1748 aa25.45■■□□□ 1.66
LYSMD2-201ENST00000267838 OTUD7AQ8TE49 926 aaPredicted RBP25.44■■□□□ 1.66
LYSMD2-201ENST00000267838 A0A0G2JS52 829 aa25.44■■□□□ 1.66
LYSMD2-201ENST00000267838 KAZALD1Q96I82 304 aa25.44■■□□□ 1.66
LYSMD2-201ENST00000267838 ATP5J2-PTCD1G3V325 749 aa25.43■■□□□ 1.66
LYSMD2-201ENST00000267838 RAB11FIP3O75154 756 aa25.43■■□□□ 1.66
LYSMD2-201ENST00000267838 SURF6O75683 361 aaKnown RBP25.43■■□□□ 1.66
LYSMD2-201ENST00000267838 CYP19A1P11511 503 aaPredicted RBP25.42■■□□□ 1.66
LYSMD2-201ENST00000267838 ZBTB3Q9H5J0 574 aa25.41■■□□□ 1.66
LYSMD2-201ENST00000267838 BICC1Q9H694 974 aaKnown RBP25.41■■□□□ 1.66
LYSMD2-201ENST00000267838 TTC22Q5TAA0 569 aa25.41■■□□□ 1.66
LYSMD2-201ENST00000267838 THSD7AQ9UPZ6 1657 aa25.4■■□□□ 1.66
LYSMD2-201ENST00000267838 GSPT1P15170 499 aaKnown RBP25.39■■□□□ 1.66
LYSMD2-201ENST00000267838 HSP90AB4PQ58FF6 505 aa25.39■■□□□ 1.66
LYSMD2-201ENST00000267838 ZNF330Q9Y3S2 320 aaPredicted RBP25.39■■□□□ 1.66
LYSMD2-201ENST00000267838 COL15A1P39059 1388 aa25.38■■□□□ 1.65
LYSMD2-201ENST00000267838 A0A087WZG4 1122 aa25.38■■□□□ 1.65
LYSMD2-201ENST00000267838 KIF6Q6ZMV9 814 aa25.38■■□□□ 1.65
LYSMD2-201ENST00000267838 OSBPL3Q9H4L5 887 aa25.38■■□□□ 1.65
LYSMD2-201ENST00000267838 UPF2Q9HAU5 1272 aaKnown RBP25.38■■□□□ 1.65
LYSMD2-201ENST00000267838 UBE3BQ7Z3V4 1068 aa25.37■■□□□ 1.65
LYSMD2-201ENST00000267838 RHPN1Q8TCX5 695 aa25.37■■□□□ 1.65
LYSMD2-201ENST00000267838 CWC25Q9NXE8 425 aaPredicted RBP25.37■■□□□ 1.65
LYSMD2-201ENST00000267838 AFF2P51816 1311 aa25.37■■□□□ 1.65
LYSMD2-201ENST00000267838 SALL3Q9BXA9 1300 aa25.37■■□□□ 1.65
LYSMD2-201ENST00000267838 KIF1BPQ96EK5 621 aa25.36■■□□□ 1.65
LYSMD2-201ENST00000267838 PDE1AP54750 535 aa25.36■■□□□ 1.65
LYSMD2-201ENST00000267838 JARID2Q92833 1246 aaPredicted RBP25.36■■□□□ 1.65
LYSMD2-201ENST00000267838 ZBTB1Q9Y2K1 713 aa25.36■■□□□ 1.65
LYSMD2-201ENST00000267838 CICQ96RK0 1608 aaPredicted RBP25.36■■□□□ 1.65
LYSMD2-201ENST00000267838 KCNQ2O43526 872 aa25.35■■□□□ 1.65
LYSMD2-201ENST00000267838 CASP7P55210 303 aa25.35■■□□□ 1.65
LYSMD2-201ENST00000267838 EPHA10Q5JZY3 1008 aa25.35■■□□□ 1.65
LYSMD2-201ENST00000267838 CCDC191Q8NCU4 936 aa25.35■■□□□ 1.65
LYSMD2-201ENST00000267838 DAXXQ9UER7 740 aaPredicted RBP25.35■■□□□ 1.65
LYSMD2-201ENST00000267838 PALLDQ8WX93 1383 aa25.34■■□□□ 1.65
LYSMD2-201ENST00000267838 H7C1W4 665 aa25.34■■□□□ 1.65
LYSMD2-201ENST00000267838 SMARCC1Q92922 1105 aaPredicted RBP25.34■■□□□ 1.65
LYSMD2-201ENST00000267838 GJD4Q96KN9 370 aaPredicted RBP25.34■■□□□ 1.65
LYSMD2-201ENST00000267838 IL1RAPL2Q9NP60 686 aa25.34■■□□□ 1.65
LYSMD2-201ENST00000267838 LOC102724428A0A0B4J2F2 783 aa25.33■■□□□ 1.65
LYSMD2-201ENST00000267838 ATP6V1AP38606 617 aa25.33■■□□□ 1.65
LYSMD2-201ENST00000267838 SIK1P57059 783 aa25.33■■□□□ 1.65
LYSMD2-201ENST00000267838 TCIRG1Q13488 830 aa25.33■■□□□ 1.65
LYSMD2-201ENST00000267838 MAP3K15Q6ZN16 1313 aa25.33■■□□□ 1.65
LYSMD2-201ENST00000267838 MX1P20591 662 aa25.33■■□□□ 1.65
LYSMD2-201ENST00000267838 OS9Q13438 667 aaPredicted RBP25.33■■□□□ 1.65
LYSMD2-201ENST00000267838 ISCA1Q9BUE6 129 aa25.33■■□□□ 1.65
LYSMD2-201ENST00000267838 PA2G4Q9UQ80 394 aaKnown RBP25.33■■□□□ 1.65
LYSMD2-201ENST00000267838 ATRNO75882 1429 aa25.32■■□□□ 1.64
LYSMD2-201ENST00000267838 CDC45O75419 566 aa25.31■■□□□ 1.64
LYSMD2-201ENST00000267838 IL6STP40189 918 aaPredicted RBP25.31■■□□□ 1.64
LYSMD2-201ENST00000267838 MFAP1P55081 439 aaKnown RBP25.31■■□□□ 1.64
LYSMD2-201ENST00000267838 RABL6Q3YEC7 729 aaPredicted RBP25.31■■□□□ 1.64
LYSMD2-201ENST00000267838 ERC1Q8IUD2 1116 aa25.31■■□□□ 1.64
LYSMD2-201ENST00000267838 TBC1D9Q6ZT07 1266 aa25.31■■□□□ 1.64
LYSMD2-201ENST00000267838 ARXQ96QS3 562 aa25.31■■□□□ 1.64
LYSMD2-201ENST00000267838 STAP2Q9UGK3 403 aa25.31■■□□□ 1.64
LYSMD2-201ENST00000267838 TBC1D32Q96NH3 1257 aa25.3■■□□□ 1.64
LYSMD2-201ENST00000267838 RREB1Q92766 1687 aa25.29■■□□□ 1.64
LYSMD2-201ENST00000267838 SDSP20132 328 aa25.29■■□□□ 1.64
LYSMD2-201ENST00000267838 TRIM28Q13263 835 aaKnown RBP25.29■■□□□ 1.64
LYSMD2-201ENST00000267838 GIGYF2Q6Y7W6 1299 aaKnown RBP25.29■■□□□ 1.64
LYSMD2-201ENST00000267838 TRPC5Q9UL62 973 aaPredicted RBP25.29■■□□□ 1.64
LYSMD2-201ENST00000267838 ITPK1Q13572 414 aa25.28■■□□□ 1.64
LYSMD2-201ENST00000267838 CCDC87Q9NVE4 849 aa25.28■■□□□ 1.64
LYSMD2-201ENST00000267838 ZNF831Q5JPB2 1677 aa25.28■■□□□ 1.64
LYSMD2-201ENST00000267838 AOX1Q06278 1338 aa25.28■■□□□ 1.64
LYSMD2-201ENST00000267838 G3BP1Q13283 466 aaKnown RBP eCLIP25.28■■□□□ 1.64
LYSMD2-201ENST00000267838 INTS5Q6P9B9 1019 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms