RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 DIAPH3Q9NSV4 1193 aa20.31■□□□□ 0.84
RTN1-201ENST00000267484 UBR1Q8IWV7 1749 aa20.31■□□□□ 0.84
RTN1-201ENST00000267484 PLEKHG1Q9ULL1 1385 aa20.3■□□□□ 0.84
RTN1-201ENST00000267484 VPS37CA5D8V6 355 aaPredicted RBP20.3■□□□□ 0.84
RTN1-201ENST00000267484 FAM177BA6PVY3 158 aa20.3■□□□□ 0.84
RTN1-201ENST00000267484 SASS6Q6UVJ0 657 aa20.3■□□□□ 0.84
RTN1-201ENST00000267484 EIF4A1P60842 406 aaKnown RBP20.29■□□□□ 0.84
RTN1-201ENST00000267484 HYPKQ9NX55 129 aa20.29■□□□□ 0.84
RTN1-201ENST00000267484 TCEANC2Q96MN5 208 aa20.29■□□□□ 0.84
RTN1-201ENST00000267484 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.29■□□□□ 0.84
RTN1-201ENST00000267484 PIK3C2AO00443 1686 aa20.29■□□□□ 0.84
RTN1-201ENST00000267484 FAM173BQ6P4H8 233 aa20.28■□□□□ 0.84
RTN1-201ENST00000267484 EID1Q9Y6B2 187 aa20.28■□□□□ 0.84
RTN1-201ENST00000267484 UBE2HP62256 183 aa20.28■□□□□ 0.84
RTN1-201ENST00000267484 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.28■□□□□ 0.84
RTN1-201ENST00000267484 TMEM87AQ8NBN3 555 aa20.28■□□□□ 0.84
RTN1-201ENST00000267484 PDRG1Q9NUG6 133 aa20.28■□□□□ 0.84
RTN1-201ENST00000267484 AP5Z1O43299 807 aa20.27■□□□□ 0.84
RTN1-201ENST00000267484 ST3GAL1Q11201 340 aa20.27■□□□□ 0.84
RTN1-201ENST00000267484 NBPF6Q5VWK0 638 aa20.27■□□□□ 0.84
RTN1-201ENST00000267484 MPRIPQ6WCQ1 1025 aa20.27■□□□□ 0.84
RTN1-201ENST00000267484 FERMT3Q86UX7 667 aa20.27■□□□□ 0.84
RTN1-201ENST00000267484 NBPF4Q96M43 638 aa20.27■□□□□ 0.84
RTN1-201ENST00000267484 NWD1Q149M9 1564 aa20.27■□□□□ 0.84
RTN1-201ENST00000267484 CWF19L2Q2TBE0 894 aaKnown RBP20.27■□□□□ 0.83
RTN1-201ENST00000267484 LRRC37A3O60309 1634 aa20.26■□□□□ 0.83
RTN1-201ENST00000267484 PRAMEF22A3QJZ6 481 aa20.26■□□□□ 0.83
RTN1-201ENST00000267484 PROSER3Q2NL68 480 aa20.26■□□□□ 0.83
RTN1-201ENST00000267484 MTMR6Q9Y217 621 aa20.26■□□□□ 0.83
RTN1-201ENST00000267484 LRRC59Q96AG4 307 aaKnown RBP20.26■□□□□ 0.83
RTN1-201ENST00000267484 ME3Q16798 604 aa20.25■□□□□ 0.83
RTN1-201ENST00000267484 FAM227BQ96M60 508 aa20.25■□□□□ 0.83
RTN1-201ENST00000267484 GLRX3O76003 335 aaKnown RBP20.25■□□□□ 0.83
RTN1-201ENST00000267484 NOLC1Q14978 699 aaKnown RBP eCLIP20.25■□□□□ 0.83
RTN1-201ENST00000267484 CLASRPQ8N2M8 674 aaKnown RBP20.25■□□□□ 0.83
RTN1-201ENST00000267484 FAM184AQ8NB25 1140 aa20.25■□□□□ 0.83
RTN1-201ENST00000267484 SPC24Q8NBT2 197 aa20.25■□□□□ 0.83
RTN1-201ENST00000267484 C9orf78Q9NZ63 289 aaPredicted RBP20.24■□□□□ 0.83
RTN1-201ENST00000267484 PXDNLA1KZ92 1463 aa20.24■□□□□ 0.83
RTN1-201ENST00000267484 ADCY9O60503 1353 aa20.24■□□□□ 0.83
RTN1-201ENST00000267484 DYNC1I1O14576 645 aa20.24■□□□□ 0.83
RTN1-201ENST00000267484 MAP3K2Q9Y2U5 619 aa20.24■□□□□ 0.83
RTN1-201ENST00000267484 DIP2AQ14689 1571 aa20.23■□□□□ 0.83
RTN1-201ENST00000267484 KCNA6P17658 529 aa20.23■□□□□ 0.83
RTN1-201ENST00000267484 KCNJ4P48050 445 aa20.23■□□□□ 0.83
RTN1-201ENST00000267484 AACSQ86V21 672 aa20.23■□□□□ 0.83
RTN1-201ENST00000267484 TAF6LQ9Y6J9 622 aa20.23■□□□□ 0.83
RTN1-201ENST00000267484 BTBD11A6QL63 1104 aa20.23■□□□□ 0.83
RTN1-201ENST00000267484 KDM4AO75164 1064 aa20.23■□□□□ 0.83
RTN1-201ENST00000267484 IFIT2P09913 472 aaKnown RBP20.23■□□□□ 0.83
RTN1-201ENST00000267484 CAMK4Q16566 473 aa20.23■□□□□ 0.83
RTN1-201ENST00000267484 UVSSAQ2YD98 709 aa20.23■□□□□ 0.83
RTN1-201ENST00000267484 CCDC8Q9H0W5 538 aaPredicted RBP20.23■□□□□ 0.83
RTN1-201ENST00000267484 ECHDC1Q9NTX5 307 aa20.23■□□□□ 0.83
RTN1-201ENST00000267484 CYP46A1Q9Y6A2 500 aa20.23■□□□□ 0.83
RTN1-201ENST00000267484 EPB41L2O43491 1005 aaKnown RBP20.22■□□□□ 0.83
RTN1-201ENST00000267484 TEFQ10587 303 aa20.22■□□□□ 0.83
RTN1-201ENST00000267484 PIBF1Q8WXW3 757 aa20.22■□□□□ 0.83
RTN1-201ENST00000267484 TPCN1Q9ULQ1 816 aa20.22■□□□□ 0.83
RTN1-201ENST00000267484 FUCA2Q9BTY2 467 aa20.21■□□□□ 0.83
RTN1-201ENST00000267484 SIL1Q9H173 461 aa20.21■□□□□ 0.83
RTN1-201ENST00000267484 TLR7Q9NYK1 1049 aaKnown RBP20.21■□□□□ 0.83
RTN1-201ENST00000267484 RBM8AQ9Y5S9 174 aaKnown RBP20.21■□□□□ 0.83
RTN1-201ENST00000267484 CACNA1FO60840 1977 aa20.2■□□□□ 0.82
RTN1-201ENST00000267484 AIMP1Q12904 312 aaKnown RBP20.2■□□□□ 0.82
RTN1-201ENST00000267484 ZNF530Q6P9A1 599 aaPredicted RBP20.2■□□□□ 0.82
RTN1-201ENST00000267484 KLHDC4Q8TBB5 520 aa20.2■□□□□ 0.82
RTN1-201ENST00000267484 ZSWIM6Q9HCJ5 1215 aa20.2■□□□□ 0.82
RTN1-201ENST00000267484 VPS53Q5VIR6 699 aa20.2■□□□□ 0.82
RTN1-201ENST00000267484 CDC37L1Q7L3B6 337 aa20.2■□□□□ 0.82
RTN1-201ENST00000267484 BABAM1Q9NWV8 329 aa20.2■□□□□ 0.82
RTN1-201ENST00000267484 ATP6V1DQ9Y5K8 247 aa20.2■□□□□ 0.82
RTN1-201ENST00000267484 TTC41PQ6P2S7 1318 aa20.2■□□□□ 0.82
RTN1-201ENST00000267484 NMIQ13287 307 aaPredicted RBP20.2■□□□□ 0.82
RTN1-201ENST00000267484 HSP90AB4PQ58FF6 505 aa20.2■□□□□ 0.82
RTN1-201ENST00000267484 RUFY2Q8WXA3 655 aa20.2■□□□□ 0.82
RTN1-201ENST00000267484 CEMIPQ8WUJ3 1361 aa20.19■□□□□ 0.82
RTN1-201ENST00000267484 STK3Q13188 491 aa20.19■□□□□ 0.82
RTN1-201ENST00000267484 NECTIN1Q15223 517 aa20.19■□□□□ 0.82
RTN1-201ENST00000267484 LARP1BQ659C4 914 aaKnown RBP20.19■□□□□ 0.82
RTN1-201ENST00000267484 CREB3L3Q68CJ9 461 aa20.19■□□□□ 0.82
RTN1-201ENST00000267484 TTC6Q86TZ1 520 aa20.19■□□□□ 0.82
RTN1-201ENST00000267484 CCDC171Q6TFL3 1326 aa20.19■□□□□ 0.82
RTN1-201ENST00000267484 BOLA2Q9H3K6 86 aa20.18■□□□□ 0.82
RTN1-201ENST00000267484 PYCARDQ9ULZ3 195 aa20.18■□□□□ 0.82
RTN1-201ENST00000267484 TBX22Q9Y458 520 aa20.18■□□□□ 0.82
RTN1-201ENST00000267484 MYRIPQ8NFW9 859 aa20.18■□□□□ 0.82
RTN1-201ENST00000267484 EAF2Q96CJ1 260 aaPredicted RBP20.18■□□□□ 0.82
RTN1-201ENST00000267484 TFIP11Q9UBB9 837 aaKnown RBP20.18■□□□□ 0.82
RTN1-201ENST00000267484 LETM1O95202 739 aaPredicted RBP20.18■□□□□ 0.82
RTN1-201ENST00000267484 LIG1P18858 919 aa20.18■□□□□ 0.82
RTN1-201ENST00000267484 KCNF1Q9H3M0 494 aa20.18■□□□□ 0.82
RTN1-201ENST00000267484 CKAP2LQ8IYA6 745 aa20.17■□□□□ 0.82
RTN1-201ENST00000267484 EDC3Q96F86 508 aaKnown RBP20.17■□□□□ 0.82
RTN1-201ENST00000267484 PRDM10Q9NQV6 1147 aa20.17■□□□□ 0.82
RTN1-201ENST00000267484 A0A0D9SFI3 127 aa20.17■□□□□ 0.82
RTN1-201ENST00000267484 USP42Q9H9J4 1324 aaKnown RBP20.17■□□□□ 0.82
RTN1-201ENST00000267484 SASH1O94885 1247 aa20.17■□□□□ 0.82
RTN1-201ENST00000267484 SUCLG2Q96I99 432 aa20.17■□□□□ 0.82
RTN1-201ENST00000267484 ZKSCAN1P17029 563 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms