RNA–Protein interactions for RNA: ENST00000265593.8

CLCN2-201, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCN2, Length 3,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-201ENST00000265593 CUL4AQ13619 759 aa18.76■□□□□ 0.59
CLCN2-201ENST00000265593 HSP90AB4PQ58FF6 505 aa18.76■□□□□ 0.59
CLCN2-201ENST00000265593 PHRF1Q9P1Y6 1649 aaKnown RBP18.76■□□□□ 0.59
CLCN2-201ENST00000265593 CNTROBQ8N137 903 aa18.76■□□□□ 0.59
CLCN2-201ENST00000265593 CWF19L2Q2TBE0 894 aaKnown RBP18.76■□□□□ 0.59
CLCN2-201ENST00000265593 HSPA4P34932 840 aa18.75■□□□□ 0.59
CLCN2-201ENST00000265593 NPHP4O75161 1426 aaPredicted RBP18.75■□□□□ 0.59
CLCN2-201ENST00000265593 ZNF142P52746 1687 aaPredicted RBP18.75■□□□□ 0.59
CLCN2-201ENST00000265593 SGSM2O43147 1006 aa18.75■□□□□ 0.59
CLCN2-201ENST00000265593 CBX1P83916 185 aa18.75■□□□□ 0.59
CLCN2-201ENST00000265593 KSR2Q6VAB6 950 aa18.74■□□□□ 0.59
CLCN2-201ENST00000265593 KRT28Q7Z3Y7 464 aa18.74■□□□□ 0.59
CLCN2-201ENST00000265593 NCAPD2Q15021 1401 aa18.74■□□□□ 0.59
CLCN2-201ENST00000265593 GPT2Q8TD30 523 aa18.74■□□□□ 0.59
CLCN2-201ENST00000265593 PA2G4Q9UQ80 394 aaKnown RBP18.74■□□□□ 0.59
CLCN2-201ENST00000265593 CWC27Q6UX04 472 aaKnown RBP18.73■□□□□ 0.59
CLCN2-201ENST00000265593 ZC3H6P61129 1189 aaKnown RBP18.73■□□□□ 0.59
CLCN2-201ENST00000265593 AIMP1Q12904 312 aaKnown RBP18.73■□□□□ 0.59
CLCN2-201ENST00000265593 CLASRPQ8N2M8 674 aaKnown RBP18.73■□□□□ 0.59
CLCN2-201ENST00000265593 NSFL1CQ9UNZ2 370 aaKnown RBP18.73■□□□□ 0.59
CLCN2-201ENST00000265593 SLIT3O75094 1523 aa18.73■□□□□ 0.59
CLCN2-201ENST00000265593 RAD50Q92878 1312 aa18.73■□□□□ 0.59
CLCN2-201ENST00000265593 ALDH1L1O75891 902 aa18.73■□□□□ 0.59
CLCN2-201ENST00000265593 IL17RAQ96F46 866 aa18.73■□□□□ 0.59
CLCN2-201ENST00000265593 INTS4Q96HW7 963 aaKnown RBP18.73■□□□□ 0.59
CLCN2-201ENST00000265593 BRD1O95696 1058 aa18.72■□□□□ 0.59
CLCN2-201ENST00000265593 ZNF445P59923 1031 aa18.72■□□□□ 0.59
CLCN2-201ENST00000265593 MTX1Q13505 466 aa18.72■□□□□ 0.59
CLCN2-201ENST00000265593 LARP6Q9BRS8 491 aaKnown RBP18.72■□□□□ 0.59
CLCN2-201ENST00000265593 CHMP3Q9Y3E7 222 aa18.72■□□□□ 0.59
CLCN2-201ENST00000265593 EPB41L2O43491 1005 aaKnown RBP18.71■□□□□ 0.59
CLCN2-201ENST00000265593 GLRX3O76003 335 aaKnown RBP18.71■□□□□ 0.59
CLCN2-201ENST00000265593 PROSER2Q86WR7 435 aaPredicted RBP18.71■□□□□ 0.59
CLCN2-201ENST00000265593 SPG7Q9UQ90 795 aa18.71■□□□□ 0.59
CLCN2-201ENST00000265593 HEG1Q9ULI3 1381 aa18.71■□□□□ 0.59
CLCN2-201ENST00000265593 LSG1Q9H089 658 aaKnown RBP18.71■□□□□ 0.59
CLCN2-201ENST00000265593 TTC41PQ6P2S7 1318 aa18.7■□□□□ 0.58
CLCN2-201ENST00000265593 HYPKQ9NX55 129 aa18.7■□□□□ 0.58
CLCN2-201ENST00000265593 SNX14Q9Y5W7 946 aa18.7■□□□□ 0.58
CLCN2-201ENST00000265593 SLC39A6Q13433 755 aa18.7■□□□□ 0.58
CLCN2-201ENST00000265593 OVOS2A0A0G2JMS6 1433 aa18.7■□□□□ 0.58
CLCN2-201ENST00000265593 SPDYE4A6NLX3 237 aa18.69■□□□□ 0.58
CLCN2-201ENST00000265593 RASEFQ8IZ41 740 aa18.69■□□□□ 0.58
CLCN2-201ENST00000265593 DIAPH3Q9NSV4 1193 aa18.69■□□□□ 0.58
CLCN2-201ENST00000265593 ERBB3P21860 1342 aa18.69■□□□□ 0.58
CLCN2-201ENST00000265593 IFIT2P09913 472 aaKnown RBP18.69■□□□□ 0.58
CLCN2-201ENST00000265593 USP42Q9H9J4 1324 aaKnown RBP18.69■□□□□ 0.58
CLCN2-201ENST00000265593 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.68■□□□□ 0.58
CLCN2-201ENST00000265593 LINS1Q8NG48 757 aa18.68■□□□□ 0.58
CLCN2-201ENST00000265593 SUCLG2Q96I99 432 aa18.68■□□□□ 0.58
CLCN2-201ENST00000265593 DDX21Q9NR30 783 aaKnown RBP eCLIP18.68■□□□□ 0.58
CLCN2-201ENST00000265593 ECHDC1Q9NTX5 307 aa18.68■□□□□ 0.58
CLCN2-201ENST00000265593 TMEM63CQ9P1W3 806 aa18.68■□□□□ 0.58
CLCN2-201ENST00000265593 GRM8O00222 908 aa18.68■□□□□ 0.58
CLCN2-201ENST00000265593 DDX58O95786 925 aaKnown RBP18.68■□□□□ 0.58
CLCN2-201ENST00000265593 NLRP2Q9NX02 1062 aa18.68■□□□□ 0.58
CLCN2-201ENST00000265593 HDAC5Q9UQL6 1122 aa18.68■□□□□ 0.58
CLCN2-201ENST00000265593 RGPD5Q99666 1765 aa18.67■□□□□ 0.58
CLCN2-201ENST00000265593 AACSQ86V21 672 aa18.67■□□□□ 0.58
CLCN2-201ENST00000265593 RAPGEF4Q8WZA2 1011 aa18.67■□□□□ 0.58
CLCN2-201ENST00000265593 PPP1R9BQ96SB3 815 aa18.67■□□□□ 0.58
CLCN2-201ENST00000265593 TTC12Q9H892 705 aaPredicted RBP18.67■□□□□ 0.58
CLCN2-201ENST00000265593 KIAA2012Q0VF49 1180 aa18.67■□□□□ 0.58
CLCN2-201ENST00000265593 BICC1Q9H694 974 aaKnown RBP18.67■□□□□ 0.58
CLCN2-201ENST00000265593 ERC1Q8IUD2 1116 aa18.66■□□□□ 0.58
CLCN2-201ENST00000265593 GPATCH3Q96I76 525 aa18.66■□□□□ 0.58
CLCN2-201ENST00000265593 USP25Q9UHP3 1055 aa18.66■□□□□ 0.58
CLCN2-201ENST00000265593 MYL6BP14649 208 aa18.66■□□□□ 0.58
CLCN2-201ENST00000265593 PDIA6Q15084 440 aa18.66■□□□□ 0.58
CLCN2-201ENST00000265593 ZNF790Q6PG37 636 aa18.66■□□□□ 0.58
CLCN2-201ENST00000265593 RIC3Q7Z5B4 369 aa18.66■□□□□ 0.58
CLCN2-201ENST00000265593 KAZALD1Q96I82 304 aa18.66■□□□□ 0.58
CLCN2-201ENST00000265593 ZKSCAN5Q9Y2L8 839 aa18.66■□□□□ 0.58
CLCN2-201ENST00000265593 TRPM3Q9HCF6 1732 aaPredicted RBP18.66■□□□□ 0.58
CLCN2-201ENST00000265593 C1orf167Q5SNV9 1468 aa18.65■□□□□ 0.58
CLCN2-201ENST00000265593 CPA1P15085 419 aa18.65■□□□□ 0.58
CLCN2-201ENST00000265593 AK2P54819 239 aa18.65■□□□□ 0.58
CLCN2-201ENST00000265593 SPC24Q8NBT2 197 aa18.65■□□□□ 0.58
CLCN2-201ENST00000265593 RUFY2Q8WXA3 655 aa18.65■□□□□ 0.58
CLCN2-201ENST00000265593 TTC14Q96N46 770 aa18.65■□□□□ 0.58
CLCN2-201ENST00000265593 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.65■□□□□ 0.58
CLCN2-201ENST00000265593 DDX17Q92841 729 aaKnown RBP18.64■□□□□ 0.58
CLCN2-201ENST00000265593 PTH1RQ03431 593 aa18.64■□□□□ 0.57
CLCN2-201ENST00000265593 G3BP1Q13283 466 aaKnown RBP eCLIP18.64■□□□□ 0.57
CLCN2-201ENST00000265593 MAPK8IP2Q13387 824 aaPredicted RBP18.64■□□□□ 0.57
CLCN2-201ENST00000265593 NFATC2IPQ8NCF5 419 aa18.64■□□□□ 0.57
CLCN2-201ENST00000265593 SIL1Q9H173 461 aa18.64■□□□□ 0.57
CLCN2-201ENST00000265593 SIPA1L3O60292 1781 aaPredicted RBP18.64■□□□□ 0.57
CLCN2-201ENST00000265593 CAMTA1Q9Y6Y1 1673 aa18.64■□□□□ 0.57
CLCN2-201ENST00000265593 SASH1O94885 1247 aa18.64■□□□□ 0.57
CLCN2-201ENST00000265593 IGKV5-2P06315 115 aa18.64■□□□□ 0.57
CLCN2-201ENST00000265593 CCDC8Q9H0W5 538 aaPredicted RBP18.64■□□□□ 0.57
CLCN2-201ENST00000265593 C19orf44Q9H6X5 657 aa18.64■□□□□ 0.57
CLCN2-201ENST00000265593 CCDC39Q9UFE4 941 aa18.64■□□□□ 0.57
CLCN2-201ENST00000265593 NOL7Q9UMY1 257 aaKnown RBP18.64■□□□□ 0.57
CLCN2-201ENST00000265593 MBD3O95983 291 aa18.63■□□□□ 0.57
CLCN2-201ENST00000265593 CASTP20810 708 aaKnown RBP18.63■□□□□ 0.57
CLCN2-201ENST00000265593 SLC52A2Q9HAB3 445 aa18.63■□□□□ 0.57
CLCN2-201ENST00000265593 ADAMTSL3P82987 1691 aa18.63■□□□□ 0.57
CLCN2-201ENST00000265593 NPHP3Q7Z494 1330 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms