RNA–Protein interactions for RNA: ENST00000265565.9

SCAP-201, Transcript of SREBF chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAP, Length 4,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-201ENST00000265565 FAM173BQ6P4H8 233 aa19.43■□□□□ 0.7
SCAP-201ENST00000265565 TRIM22Q8IYM9 498 aa19.43■□□□□ 0.7
SCAP-201ENST00000265565 DENND4BO75064 1496 aaPredicted RBP19.43■□□□□ 0.7
SCAP-201ENST00000265565 CBFA2T2O43439 604 aa19.43■□□□□ 0.7
SCAP-201ENST00000265565 IDH1O75874 414 aaKnown RBP19.43■□□□□ 0.7
SCAP-201ENST00000265565 PTGS1P23219 599 aa19.43■□□□□ 0.7
SCAP-201ENST00000265565 TMCO3Q6UWJ1 677 aa19.43■□□□□ 0.7
SCAP-201ENST00000265565 CCDC82Q8N4S0 544 aa19.43■□□□□ 0.7
SCAP-201ENST00000265565 ATF3P18847 181 aa19.43■□□□□ 0.7
SCAP-201ENST00000265565 RAD21O60216 631 aa19.42■□□□□ 0.7
SCAP-201ENST00000265565 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.42■□□□□ 0.71e-6■■■■□ 20.3
SCAP-201ENST00000265565 BRMS1Q9HCU9 246 aa19.42■□□□□ 0.7
SCAP-201ENST00000265565 IFIT1P09914 478 aaKnown RBP19.42■□□□□ 0.7
SCAP-201ENST00000265565 IMMTQ16891 758 aaKnown RBP19.42■□□□□ 0.7
SCAP-201ENST00000265565 TMC6Q7Z403 805 aa19.42■□□□□ 0.7
SCAP-201ENST00000265565 TMX1Q9H3N1 280 aa19.42■□□□□ 0.7
SCAP-201ENST00000265565 PTCD1O75127 700 aaKnown RBP19.42■□□□□ 0.7
SCAP-201ENST00000265565 RUFY1Q96T51 708 aa19.42■□□□□ 0.7
SCAP-201ENST00000265565 TYRO3Q06418 890 aa19.42■□□□□ 0.7
SCAP-201ENST00000265565 CEP135Q66GS9 1140 aa19.42■□□□□ 0.7
SCAP-201ENST00000265565 LUZP1Q86V48 1076 aa19.42■□□□□ 0.7
SCAP-201ENST00000265565 CWC15Q9P013 229 aaKnown RBP19.42■□□□□ 0.7
SCAP-201ENST00000265565 A0A087WZG4 1122 aa19.41■□□□□ 0.7
SCAP-201ENST00000265565 POLR3GO15318 223 aaPredicted RBP19.41■□□□□ 0.7
SCAP-201ENST00000265565 CTAGE5O15320 804 aa19.41■□□□□ 0.7
SCAP-201ENST00000265565 ATP5J2-PTCD1G3V325 749 aa19.41■□□□□ 0.7
SCAP-201ENST00000265565 KIF2AO00139 706 aaPredicted RBP19.41■□□□□ 0.7
SCAP-201ENST00000265565 GOLIM4O00461 696 aa19.41■□□□□ 0.7
SCAP-201ENST00000265565 DDX46Q7L014 1031 aaKnown RBP19.41■□□□□ 0.7
SCAP-201ENST00000265565 SMARCE1Q969G3 411 aa19.41■□□□□ 0.7
SCAP-201ENST00000265565 PHAXQ9H814 394 aaKnown RBP19.41■□□□□ 0.7
SCAP-201ENST00000265565 IL13P35225 146 aa19.41■□□□□ 0.7
SCAP-201ENST00000265565 TSC1Q92574 1164 aa19.41■□□□□ 0.7
SCAP-201ENST00000265565 SNRKQ9NRH2 765 aa19.41■□□□□ 0.7
SCAP-201ENST00000265565 HAND2P61296 217 aa19.4■□□□□ 0.7
SCAP-201ENST00000265565 DHX8Q14562 1220 aaKnown RBP19.4■□□□□ 0.7
SCAP-201ENST00000265565 PROSER2Q86WR7 435 aaPredicted RBP19.4■□□□□ 0.7
SCAP-201ENST00000265565 PPIP5K1Q6PFW1 1433 aa19.4■□□□□ 0.7
SCAP-201ENST00000265565 SKILP12757 684 aa19.4■□□□□ 0.7
SCAP-201ENST00000265565 UBE3BQ7Z3V4 1068 aa19.4■□□□□ 0.7
SCAP-201ENST00000265565 CCDC69A6NI79 296 aa19.4■□□□□ 0.7
SCAP-201ENST00000265565 STX1AQ16623 288 aa19.4■□□□□ 0.7
SCAP-201ENST00000265565 ABCC10Q5T3U5 1492 aa19.39■□□□□ 0.7
SCAP-201ENST00000265565 SLC3A2P08195 630 aaKnown RBP19.39■□□□□ 0.7
SCAP-201ENST00000265565 LEKR1Q6ZMV7 388 aa19.39■□□□□ 0.7
SCAP-201ENST00000265565 PNMA6EA0A0J9YXQ4 647 aa19.39■□□□□ 0.69
SCAP-201ENST00000265565 CEBPAP49715 358 aaPredicted RBP19.39■□□□□ 0.69
SCAP-201ENST00000265565 KLHL10Q6JEL2 608 aa19.39■□□□□ 0.69
SCAP-201ENST00000265565 WDR7Q9Y4E6 1490 aa19.39■□□□□ 0.69
SCAP-201ENST00000265565 TOP1P11387 765 aaKnown RBP19.38■□□□□ 0.69
SCAP-201ENST00000265565 AXDND1Q5T1B0 1012 aaPredicted RBP19.38■□□□□ 0.69
SCAP-201ENST00000265565 HYPKQ9NX55 129 aa19.38■□□□□ 0.69
SCAP-201ENST00000265565 NOM1Q5C9Z4 860 aaKnown RBP19.38■□□□□ 0.69
SCAP-201ENST00000265565 AK7Q96M32 723 aa19.38■□□□□ 0.69
SCAP-201ENST00000265565 STRN4Q9NRL3 753 aa19.38■□□□□ 0.69
SCAP-201ENST00000265565 BCORL1Q5H9F3 1711 aa19.38■□□□□ 0.69
SCAP-201ENST00000265565 SETQ01105 290 aaPredicted RBP19.37■□□□□ 0.69
SCAP-201ENST00000265565 SOS1Q07889 1333 aaPredicted RBP19.37■□□□□ 0.69
SCAP-201ENST00000265565 NEMFO60524 1076 aa19.37■□□□□ 0.69
SCAP-201ENST00000265565 CDKL5O76039 1030 aa19.37■□□□□ 0.69
SCAP-201ENST00000265565 HMGB1P09429 215 aaKnown RBP19.37■□□□□ 0.69
SCAP-201ENST00000265565 NMIQ13287 307 aaPredicted RBP19.37■□□□□ 0.69
SCAP-201ENST00000265565 SNW1Q13573 536 aaKnown RBP19.37■□□□□ 0.69
SCAP-201ENST00000265565 ABCA5Q8WWZ7 1642 aa19.37■□□□□ 0.69
SCAP-201ENST00000265565 PODXL2Q9NZ53 605 aa19.37■□□□□ 0.69
SCAP-201ENST00000265565 GOLGA8BA8MQT2 603 aa19.36■□□□□ 0.69
SCAP-201ENST00000265565 CHL1O00533 1208 aa19.36■□□□□ 0.69
SCAP-201ENST00000265565 KIF6Q6ZMV9 814 aa19.36■□□□□ 0.69
SCAP-201ENST00000265565 ERCC4Q92889 916 aaPredicted RBP19.36■□□□□ 0.69
SCAP-201ENST00000265565 PPP1R9BQ96SB3 815 aa19.36■□□□□ 0.69
SCAP-201ENST00000265565 EYA1Q99502 592 aa19.36■□□□□ 0.69
SCAP-201ENST00000265565 DACH1Q9UI36 760 aa19.36■□□□□ 0.69
SCAP-201ENST00000265565 PIBF1Q8WXW3 757 aa19.36■□□□□ 0.69
SCAP-201ENST00000265565 CPLX3Q8WVH0 158 aa19.36■□□□□ 0.69
SCAP-201ENST00000265565 ORC3Q9UBD5 711 aaPredicted RBP19.36■□□□□ 0.69
SCAP-201ENST00000265565 USP16Q9Y5T5 823 aa19.36■□□□□ 0.69
SCAP-201ENST00000265565 MBD5Q9P267 1494 aa19.35■□□□□ 0.69
SCAP-201ENST00000265565 CWF19L2Q2TBE0 894 aaKnown RBP19.35■□□□□ 0.69
SCAP-201ENST00000265565 KCNH5Q8NCM2 988 aa19.35■□□□□ 0.69
SCAP-201ENST00000265565 PAXBP1Q9Y5B6 917 aa19.35■□□□□ 0.69
SCAP-201ENST00000265565 ARHGAP29Q52LW3 1261 aa19.35■□□□□ 0.69
SCAP-201ENST00000265565 PHF8Q9UPP1 1060 aa19.35■□□□□ 0.69
SCAP-201ENST00000265565 HSP90AA4PQ58FG1 418 aa19.35■□□□□ 0.69
SCAP-201ENST00000265565 AMOTL1Q8IY63 956 aa19.35■□□□□ 0.69
SCAP-201ENST00000265565 GPT2Q8TD30 523 aa19.35■□□□□ 0.69
SCAP-201ENST00000265565 CCDC94Q9BW85 323 aaPredicted RBP19.35■□□□□ 0.69
SCAP-201ENST00000265565 PALD1Q9ULE6 856 aa19.35■□□□□ 0.69
SCAP-201ENST00000265565 NPHP3Q7Z494 1330 aa19.35■□□□□ 0.69
SCAP-201ENST00000265565 AMOTQ4VCS5 1084 aa19.35■□□□□ 0.69
SCAP-201ENST00000265565 CREB3L3Q68CJ9 461 aa19.35■□□□□ 0.69
SCAP-201ENST00000265565 GSDMDP57764 484 aa19.34■□□□□ 0.69
SCAP-201ENST00000265565 BRD1O95696 1058 aa19.34■□□□□ 0.69
SCAP-201ENST00000265565 TDO2P48775 406 aa19.34■□□□□ 0.69
SCAP-201ENST00000265565 CCDC102AQ96A19 550 aa19.34■□□□□ 0.69
SCAP-201ENST00000265565 NOL10Q9BSC4 688 aaKnown RBP19.34■□□□□ 0.69
SCAP-201ENST00000265565 HMG20BQ9P0W2 317 aa19.34■□□□□ 0.69
SCAP-201ENST00000265565 Q6ZUG5 572 aa19.34■□□□□ 0.69
SCAP-201ENST00000265565 TOM1L2Q6ZVM7 507 aa19.34■□□□□ 0.69
SCAP-201ENST00000265565 NACAP1Q9BZK3 213 aa19.34■□□□□ 0.69
SCAP-201ENST00000265565 ZSCAN16Q9H4T2 348 aaPredicted RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms