RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 RREB1Q92766 1687 aa28.66■■■□□ 2.18
SMARCB1-201ENST00000263121 NBPF7P0C2Y1 421 aaPredicted RBP28.66■■■□□ 2.18
SMARCB1-201ENST00000263121 FAM182BQ5T319 152 aa28.66■■■□□ 2.18
SMARCB1-201ENST00000263121 LRRFIP2Q9Y608 721 aaKnown RBP28.66■■■□□ 2.18
SMARCB1-201ENST00000263121 FBXO41Q8TF61 875 aa28.65■■■□□ 2.18
SMARCB1-201ENST00000263121 MYD88Q99836 296 aa28.65■■■□□ 2.18
SMARCB1-201ENST00000263121 UTYO14607 1347 aa28.65■■■□□ 2.18
SMARCB1-201ENST00000263121 NEURL1BA8MQ27 555 aa28.64■■■□□ 2.18
SMARCB1-201ENST00000263121 ATP6V1AP38606 617 aa28.64■■■□□ 2.18
SMARCB1-201ENST00000263121 PTF1AQ7RTS3 328 aa28.64■■■□□ 2.18
SMARCB1-201ENST00000263121 BRWD3Q6RI45 1802 aa28.64■■■□□ 2.17
SMARCB1-201ENST00000263121 COL5A3P25940 1745 aaPredicted RBP28.63■■■□□ 2.17
SMARCB1-201ENST00000263121 ITPK1Q13572 414 aa28.63■■■□□ 2.17
SMARCB1-201ENST00000263121 DCTPP1Q9H773 170 aa28.63■■■□□ 2.17
SMARCB1-201ENST00000263121 ZBTB1Q9Y2K1 713 aa28.63■■■□□ 2.17
SMARCB1-201ENST00000263121 AFDNP55196 1824 aaKnown RBP28.62■■■□□ 2.17
SMARCB1-201ENST00000263121 GRM8O00222 908 aa28.61■■■□□ 2.17
SMARCB1-201ENST00000263121 HMMRO75330 724 aa28.61■■■□□ 2.17
SMARCB1-201ENST00000263121 RBM6P78332 1123 aaKnown RBP28.61■■■□□ 2.17
SMARCB1-201ENST00000263121 NUCB1Q02818 461 aa28.61■■■□□ 2.17
SMARCB1-201ENST00000263121 C9orf78Q9NZ63 289 aaPredicted RBP28.61■■■□□ 2.17
SMARCB1-201ENST00000263121 ATP8B2P98198 1209 aa28.61■■■□□ 2.17
SMARCB1-201ENST00000263121 RGS3P49796 1198 aa28.6■■■□□ 2.17
SMARCB1-201ENST00000263121 GCKRQ14397 625 aa28.6■■■□□ 2.17
SMARCB1-201ENST00000263121 IL6STP40189 918 aaPredicted RBP28.59■■■□□ 2.17
SMARCB1-201ENST00000263121 INTS5Q6P9B9 1019 aaKnown RBP28.59■■■□□ 2.17
SMARCB1-201ENST00000263121 ZBTB3Q9H5J0 574 aa28.58■■■□□ 2.17
SMARCB1-201ENST00000263121 TSHZ2Q9NRE2 1034 aa28.58■■■□□ 2.17
SMARCB1-201ENST00000263121 CCDC87Q9NVE4 849 aa28.58■■■□□ 2.17
SMARCB1-201ENST00000263121 HDAC5Q9UQL6 1122 aa28.58■■■□□ 2.17
SMARCB1-201ENST00000263121 PNMA6EA0A0J9YXQ4 647 aa28.57■■■□□ 2.16
SMARCB1-201ENST00000263121 CRKLP46109 303 aaKnown RBP28.57■■■□□ 2.16
SMARCB1-201ENST00000263121 KIF6Q6ZMV9 814 aa28.57■■■□□ 2.16
SMARCB1-201ENST00000263121 KRT27Q7Z3Y8 459 aa28.57■■■□□ 2.16
SMARCB1-201ENST00000263121 ZNF330Q9Y3S2 320 aaPredicted RBP28.57■■■□□ 2.16
SMARCB1-201ENST00000263121 LY75O60449 1722 aa28.56■■■□□ 2.16
SMARCB1-201ENST00000263121 ATP5J2-PTCD1G3V325 749 aa28.55■■■□□ 2.16
SMARCB1-201ENST00000263121 CHD1LQ86WJ1 897 aa28.55■■■□□ 2.16
SMARCB1-201ENST00000263121 MAP3K15Q6ZN16 1313 aa28.55■■■□□ 2.16
SMARCB1-201ENST00000263121 MYH14Q7Z406 1995 aaKnown RBP28.55■■■□□ 2.16
SMARCB1-201ENST00000263121 PDE4AP27815 886 aa28.54■■■□□ 2.16
SMARCB1-201ENST00000263121 EIF5P55010 431 aaKnown RBP28.54■■■□□ 2.16
SMARCB1-201ENST00000263121 MTX1Q13505 466 aa28.54■■■□□ 2.16
SMARCB1-201ENST00000263121 SSH3Q8TE77 659 aa28.54■■■□□ 2.16
SMARCB1-201ENST00000263121 POLA2Q14181 598 aa28.53■■■□□ 2.16
SMARCB1-201ENST00000263121 ANKRD45Q5TZF3 282 aa28.53■■■□□ 2.16
SMARCB1-201ENST00000263121 FAM196AQ6ZSG2 479 aa28.53■■■□□ 2.16
SMARCB1-201ENST00000263121 BCL11BQ9C0K0 894 aaPredicted RBP28.53■■■□□ 2.16
SMARCB1-201ENST00000263121 PPP1R42Q7Z4L9 355 aa28.52■■■□□ 2.16
SMARCB1-201ENST00000263121 KAZALD1Q96I82 304 aa28.52■■■□□ 2.16
SMARCB1-201ENST00000263121 SUCLG2Q96I99 432 aa28.52■■■□□ 2.16
SMARCB1-201ENST00000263121 ISCA1Q9BUE6 129 aa28.52■■■□□ 2.16
SMARCB1-201ENST00000263121 COL15A1P39059 1388 aa28.52■■■□□ 2.16
SMARCB1-201ENST00000263121 TCIRG1Q13488 830 aa28.51■■■□□ 2.16
SMARCB1-201ENST00000263121 LINC00116Q8NCU8 138 aa28.51■■■□□ 2.16
SMARCB1-201ENST00000263121 CCDC191Q8NCU4 936 aa28.51■■■□□ 2.15
SMARCB1-201ENST00000263121 LNPKQ9C0E8 428 aa28.51■■■□□ 2.15
SMARCB1-201ENST00000263121 GIGYF2Q6Y7W6 1299 aaKnown RBP28.5■■■□□ 2.15
SMARCB1-201ENST00000263121 CWC25Q9NXE8 425 aaPredicted RBP28.5■■■□□ 2.15
SMARCB1-201ENST00000263121 ANKRD36CQ5JPF3 1778 aa28.49■■■□□ 2.15
SMARCB1-201ENST00000263121 ERVV-1B6SEH8 477 aa28.49■■■□□ 2.15
SMARCB1-201ENST00000263121 CASP7P55210 303 aa28.49■■■□□ 2.15
SMARCB1-201ENST00000263121 TRIM28Q13263 835 aaKnown RBP28.49■■■□□ 2.15
SMARCB1-201ENST00000263121 CNTNAP4Q9C0A0 1308 aa28.49■■■□□ 2.15
SMARCB1-201ENST00000263121 A0A087WZG4 1122 aa28.48■■■□□ 2.15
SMARCB1-201ENST00000263121 DZIP3Q86Y13 1208 aaKnown RBP28.48■■■□□ 2.15
SMARCB1-201ENST00000263121 SRGAP3O43295 1099 aa28.48■■■□□ 2.15
SMARCB1-201ENST00000263121 H7C1W4 665 aa28.47■■■□□ 2.15
SMARCB1-201ENST00000263121 HLFQ16534 295 aa28.47■■■□□ 2.15
SMARCB1-201ENST00000263121 NPM2Q86SE8 214 aaKnown RBP28.47■■■□□ 2.15
SMARCB1-201ENST00000263121 BICC1Q9H694 974 aaKnown RBP28.47■■■□□ 2.15
SMARCB1-201ENST00000263121 NUP98P52948 1817 aa28.46■■■□□ 2.15
SMARCB1-201ENST00000263121 RXRBP28702 533 aa28.46■■■□□ 2.15
SMARCB1-201ENST00000263121 UBE3BQ7Z3V4 1068 aa28.46■■■□□ 2.15
SMARCB1-201ENST00000263121 ARXQ96QS3 562 aa28.46■■■□□ 2.15
SMARCB1-201ENST00000263121 RGS17Q9UGC6 210 aaPredicted RBP28.46■■■□□ 2.15
SMARCB1-201ENST00000263121 KCNQ4P56696 695 aa28.45■■■□□ 2.15
SMARCB1-201ENST00000263121 HSP90AB3PQ58FF7 597 aa28.45■■■□□ 2.15
SMARCB1-201ENST00000263121 TAF1LQ8IZX4 1826 aa28.45■■■□□ 2.15
SMARCB1-201ENST00000263121 CCNL1Q9UK58 526 aaPredicted RBP28.45■■■□□ 2.14
SMARCB1-201ENST00000263121 TBC1D2BQ9UPU7 963 aa28.45■■■□□ 2.14
SMARCB1-201ENST00000263121 EXOC6BQ9Y2D4 811 aa28.45■■■□□ 2.14
SMARCB1-201ENST00000263121 RC3H1Q5TC82 1133 aaKnown RBP28.44■■■□□ 2.14
SMARCB1-201ENST00000263121 EPHA10Q5JZY3 1008 aa28.43■■■□□ 2.14
SMARCB1-201ENST00000263121 JARID2Q92833 1246 aaPredicted RBP28.42■■■□□ 2.14
SMARCB1-201ENST00000263121 RABL6Q3YEC7 729 aaPredicted RBP28.42■■■□□ 2.14
SMARCB1-201ENST00000263121 BCORQ6W2J9 1755 aa28.41■■■□□ 2.14
SMARCB1-201ENST00000263121 CAMTA2O94983 1202 aa28.4■■■□□ 2.14
SMARCB1-201ENST00000263121 ZBTB47Q9UFB7 747 aaPredicted RBP28.4■■■□□ 2.14
SMARCB1-201ENST00000263121 NOP58Q9Y2X3 529 aaKnown RBP28.4■■■□□ 2.14
SMARCB1-201ENST00000263121 BACH2Q9BYV9 841 aa28.39■■■□□ 2.14
SMARCB1-201ENST00000263121 APBB1O00213 710 aa28.38■■■□□ 2.13
SMARCB1-201ENST00000263121 TRIM37O94972 964 aa28.38■■■□□ 2.13
SMARCB1-201ENST00000263121 NLRP10Q86W26 655 aa28.38■■■□□ 2.13
SMARCB1-201ENST00000263121 C4BP0C0L5 1744 aa28.38■■■□□ 2.13
SMARCB1-201ENST00000263121 SMARCA5O60264 1052 aaPredicted RBP28.38■■■□□ 2.13
SMARCB1-201ENST00000263121 RAB11FIP3O75154 756 aa28.38■■■□□ 2.13
SMARCB1-201ENST00000263121 SURF6O75683 361 aaKnown RBP28.38■■■□□ 2.13
SMARCB1-201ENST00000263121 ZNF34Q8IZ26 560 aa28.38■■■□□ 2.13
SMARCB1-201ENST00000263121 LRRCC1Q9C099 1032 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms