RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 ADGRL1O94910 1474 aa18.41■□□□□ 0.54
SHANK3-201ENST00000262795 CALM1P0DP23 149 aa18.41■□□□□ 0.54
SHANK3-201ENST00000262795 CALM2P0DP24 149 aa18.41■□□□□ 0.54
SHANK3-201ENST00000262795 CALM3P0DP25 149 aa18.41■□□□□ 0.54
SHANK3-201ENST00000262795 PRPF40BQ6NWY9 871 aaKnown RBP18.41■□□□□ 0.54
SHANK3-201ENST00000262795 LDHCP07864 332 aa18.41■□□□□ 0.54
SHANK3-201ENST00000262795 GRIPAP1Q4V328 841 aa18.41■□□□□ 0.54
SHANK3-201ENST00000262795 KCNA4P22459 653 aa18.41■□□□□ 0.54
SHANK3-201ENST00000262795 MRE11P49959 708 aa18.41■□□□□ 0.54
SHANK3-201ENST00000262795 SYNCQ9H7C4 482 aa18.41■□□□□ 0.54
SHANK3-201ENST00000262795 EIF6P56537 245 aaKnown RBP18.41■□□□□ 0.54
SHANK3-201ENST00000262795 KIF21BO75037 1637 aa18.4■□□□□ 0.54
SHANK3-201ENST00000262795 CCDC7Q96M83 1385 aa18.4■□□□□ 0.54
SHANK3-201ENST00000262795 DDX17Q92841 729 aaKnown RBP18.4■□□□□ 0.54
SHANK3-201ENST00000262795 CCDC113Q9H0I3 377 aa18.4■□□□□ 0.54
SHANK3-201ENST00000262795 EPB41L2O43491 1005 aaKnown RBP18.4■□□□□ 0.54
SHANK3-201ENST00000262795 TERF1P54274 439 aa18.4■□□□□ 0.54
SHANK3-201ENST00000262795 CAMK4Q16566 473 aa18.4■□□□□ 0.54
SHANK3-201ENST00000262795 GOLGA8AA7E2F4 631 aa18.4■□□□□ 0.54
SHANK3-201ENST00000262795 GOLGA8BA8MQT2 603 aa18.4■□□□□ 0.54
SHANK3-201ENST00000262795 LMAN1P49257 510 aa18.4■□□□□ 0.54
SHANK3-201ENST00000262795 PDE4BQ07343 736 aa18.4■□□□□ 0.54
SHANK3-201ENST00000262795 TMX1Q9H3N1 280 aa18.4■□□□□ 0.54
SHANK3-201ENST00000262795 PRC1O43663 620 aa18.4■□□□□ 0.54
SHANK3-201ENST00000262795 ATXN8OSP0DMR3 200 aa18.4■□□□□ 0.54
SHANK3-201ENST00000262795 RAB3GAP1Q15042 981 aa18.4■□□□□ 0.54
SHANK3-201ENST00000262795 ZNF804AQ7Z570 1209 aa18.4■□□□□ 0.54
SHANK3-201ENST00000262795 LRRC59Q96AG4 307 aaKnown RBP18.4■□□□□ 0.54
SHANK3-201ENST00000262795 GOPCQ9HD26 462 aa18.4■□□□□ 0.54
SHANK3-201ENST00000262795 CEP131Q9UPN4 1083 aa18.4■□□□□ 0.54
SHANK3-201ENST00000262795 JAKMIP3Q5VZ66 844 aa18.4■□□□□ 0.54
SHANK3-201ENST00000262795 WASLO00401 505 aaPredicted RBP18.39■□□□□ 0.54
SHANK3-201ENST00000262795 SPATA32Q96LK8 384 aa18.39■□□□□ 0.54
SHANK3-201ENST00000262795 ATAD2Q6PL18 1390 aa18.39■□□□□ 0.54
SHANK3-201ENST00000262795 AKNAQ7Z591 1439 aa18.39■□□□□ 0.53
SHANK3-201ENST00000262795 DZIP3Q86Y13 1208 aaKnown RBP18.39■□□□□ 0.53
SHANK3-201ENST00000262795 OTUD6BQ8N6M0 293 aa18.39■□□□□ 0.53
SHANK3-201ENST00000262795 PICK1Q9NRD5 415 aa18.39■□□□□ 0.53
SHANK3-201ENST00000262795 U3KPZ7 1027 aaPredicted RBP18.39■□□□□ 0.53
SHANK3-201ENST00000262795 PUS7Q96PZ0 661 aaKnown RBP18.39■□□□□ 0.53
SHANK3-201ENST00000262795 SAP30BPQ9UHR5 308 aaKnown RBP18.39■□□□□ 0.53
SHANK3-201ENST00000262795 CYP7A1P22680 504 aa18.39■□□□□ 0.53
SHANK3-201ENST00000262795 GSTO1P78417 241 aa18.39■□□□□ 0.53
SHANK3-201ENST00000262795 CACNA2D4Q7Z3S7 1137 aa18.39■□□□□ 0.53
SHANK3-201ENST00000262795 GOLGA6L10A6NI86 522 aa18.39■□□□□ 0.53
SHANK3-201ENST00000262795 CNGA1P29973 690 aa18.38■□□□□ 0.53
SHANK3-201ENST00000262795 CCNL1Q9UK58 526 aaPredicted RBP18.38■□□□□ 0.53
SHANK3-201ENST00000262795 SSX2IPQ9Y2D8 614 aa18.38■□□□□ 0.53
SHANK3-201ENST00000262795 PHACTR2O75167 634 aa18.38■□□□□ 0.53
SHANK3-201ENST00000262795 FCHSD2O94868 740 aa18.38■□□□□ 0.53
SHANK3-201ENST00000262795 HELBQ8NG08 1087 aaPredicted RBP18.38■□□□□ 0.53
SHANK3-201ENST00000262795 GCC1Q96CN9 775 aa18.38■□□□□ 0.53
SHANK3-201ENST00000262795 HYPKQ9NX55 129 aa18.38■□□□□ 0.53
SHANK3-201ENST00000262795 TCHPQ9BT92 498 aa18.38■□□□□ 0.53
SHANK3-201ENST00000262795 TSPYL1Q9H0U9 437 aa18.38■□□□□ 0.53
SHANK3-201ENST00000262795 BAG6P46379 1132 aa18.38■□□□□ 0.53
SHANK3-201ENST00000262795 CRNKL1Q9BZJ0 848 aaKnown RBP18.38■□□□□ 0.53
SHANK3-201ENST00000262795 GPHNQ9NQX3 736 aaPredicted RBP18.38■□□□□ 0.53
SHANK3-201ENST00000262795 CCDC83Q8IWF9 413 aa18.37■□□□□ 0.53
SHANK3-201ENST00000262795 TEX13AQ9BXU3 409 aaPredicted RBP18.37■□□□□ 0.53
SHANK3-201ENST00000262795 IDEP14735 1019 aa18.37■□□□□ 0.53
SHANK3-201ENST00000262795 CT47B1P0C2W7 299 aaPredicted RBP18.37■□□□□ 0.53
SHANK3-201ENST00000262795 CCDC178Q5BJE1 867 aa18.37■□□□□ 0.53
SHANK3-201ENST00000262795 PANK2Q9BZ23 570 aa18.37■□□□□ 0.53
SHANK3-201ENST00000262795 BIRC2Q13490 618 aa18.37■□□□□ 0.53
SHANK3-201ENST00000262795 PLEKHH2Q8IVE3 1493 aa18.37■□□□□ 0.53
SHANK3-201ENST00000262795 FERMT3Q86UX7 667 aa18.37■□□□□ 0.53
SHANK3-201ENST00000262795 RABEP1Q15276 862 aa18.36■□□□□ 0.53
SHANK3-201ENST00000262795 TMEM67Q5HYA8 995 aa18.36■□□□□ 0.53
SHANK3-201ENST00000262795 HEATR3Q7Z4Q2 680 aa18.36■□□□□ 0.53
SHANK3-201ENST00000262795 ACEP12821 1306 aa18.36■□□□□ 0.53
SHANK3-201ENST00000262795 FNBP4Q8N3X1 1017 aaPredicted RBP18.36■□□□□ 0.53
SHANK3-201ENST00000262795 EZRP15311 586 aaKnown RBP18.36■□□□□ 0.53
SHANK3-201ENST00000262795 TSPY26PQ9H489 355 aa18.36■□□□□ 0.53
SHANK3-201ENST00000262795 NCBP1Q09161 790 aaKnown RBP18.36■□□□□ 0.53
SHANK3-201ENST00000262795 IDI1Q13907 227 aa18.36■□□□□ 0.53
SHANK3-201ENST00000262795 NPHP3Q7Z494 1330 aa18.36■□□□□ 0.53
SHANK3-201ENST00000262795 CBX1P83916 185 aa18.36■□□□□ 0.53
SHANK3-201ENST00000262795 TCIRG1Q13488 830 aa18.36■□□□□ 0.53
SHANK3-201ENST00000262795 WDR7Q9Y4E6 1490 aa18.35■□□□□ 0.53
SHANK3-201ENST00000262795 DNAAF4Q8WXU2 420 aa18.35■□□□□ 0.53
SHANK3-201ENST00000262795 TAF4BQ92750 862 aa18.35■□□□□ 0.53
SHANK3-201ENST00000262795 CDK13Q14004 1512 aaKnown RBP18.35■□□□□ 0.53
SHANK3-201ENST00000262795 CWC15Q9P013 229 aaKnown RBP18.35■□□□□ 0.53
SHANK3-201ENST00000262795 TMPOP42166 694 aaKnown RBP18.35■□□□□ 0.53
SHANK3-201ENST00000262795 RBM17Q96I25 401 aaKnown RBP18.35■□□□□ 0.53
SHANK3-201ENST00000262795 CETN2P41208 172 aa18.35■□□□□ 0.53
SHANK3-201ENST00000262795 FAM135AQ9P2D6 1515 aa18.35■□□□□ 0.53
SHANK3-201ENST00000262795 FAM83GA6ND36 823 aa18.34■□□□□ 0.53
SHANK3-201ENST00000262795 ZNF397Q8NF99 534 aaPredicted RBP18.34■□□□□ 0.53
SHANK3-201ENST00000262795 SMARCC1Q92922 1105 aaPredicted RBP18.34■□□□□ 0.53
SHANK3-201ENST00000262795 TMOD4Q9NZQ9 345 aa18.34■□□□□ 0.53
SHANK3-201ENST00000262795 LARGE2Q8N3Y3 721 aa18.34■□□□□ 0.53
SHANK3-201ENST00000262795 NYXQ9GZU5 481 aa18.34■□□□□ 0.53
SHANK3-201ENST00000262795 RAB34Q9BZG1 259 aa18.34■□□□□ 0.53
SHANK3-201ENST00000262795 ANKRD30BQ9BXX2 1392 aa18.34■□□□□ 0.53
SHANK3-201ENST00000262795 MICU3Q86XE3 530 aa18.33■□□□□ 0.53
SHANK3-201ENST00000262795 SMARCC2Q8TAQ2 1214 aa18.33■□□□□ 0.53
SHANK3-201ENST00000262795 KIF1BPQ96EK5 621 aa18.33■□□□□ 0.53
SHANK3-201ENST00000262795 TMEM57Q8N5G2 664 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms