RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 NEURL1BA8MQ27 555 aa16.26■□□□□ 0.19
VAMP7-201ENST00000262640 ATP6V1AP38606 617 aa16.26■□□□□ 0.19
VAMP7-201ENST00000262640 ARFGEF2Q9Y6D5 1785 aa16.26■□□□□ 0.19
VAMP7-201ENST00000262640 UTYO14607 1347 aa16.25■□□□□ 0.19
VAMP7-201ENST00000262640 NBPF7P0C2Y1 421 aaPredicted RBP16.25■□□□□ 0.19
VAMP7-201ENST00000262640 FBXO41Q8TF61 875 aa16.25■□□□□ 0.19
VAMP7-201ENST00000262640 DCTPP1Q9H773 170 aa16.25■□□□□ 0.19
VAMP7-201ENST00000262640 ATP8B2P98198 1209 aa16.25■□□□□ 0.19
VAMP7-201ENST00000262640 NUCB1Q02818 461 aa16.25■□□□□ 0.19
VAMP7-201ENST00000262640 GRM8O00222 908 aa16.24■□□□□ 0.19
VAMP7-201ENST00000262640 RGS3P49796 1198 aa16.24■□□□□ 0.19
VAMP7-201ENST00000262640 RBM6P78332 1123 aaKnown RBP16.24■□□□□ 0.19
VAMP7-201ENST00000262640 KIF6Q6ZMV9 814 aa16.24■□□□□ 0.19
VAMP7-201ENST00000262640 ZNF831Q5JPB2 1677 aa16.24■□□□□ 0.19
VAMP7-201ENST00000262640 IL6STP40189 918 aaPredicted RBP16.23■□□□□ 0.19
VAMP7-201ENST00000262640 GCKRQ14397 625 aa16.23■□□□□ 0.19
VAMP7-201ENST00000262640 FAM182BQ5T319 152 aa16.23■□□□□ 0.19
VAMP7-201ENST00000262640 ZBTB1Q9Y2K1 713 aa16.23■□□□□ 0.19
VAMP7-201ENST00000262640 NUP188Q5SRE5 1749 aa16.23■□□□□ 0.19
VAMP7-201ENST00000262640 CCDC87Q9NVE4 849 aa16.23■□□□□ 0.19
VAMP7-201ENST00000262640 ZNF330Q9Y3S2 320 aaPredicted RBP16.23■□□□□ 0.19
VAMP7-201ENST00000262640 ITPK1Q13572 414 aa16.22■□□□□ 0.19
VAMP7-201ENST00000262640 ZBTB3Q9H5J0 574 aa16.22■□□□□ 0.19
VAMP7-201ENST00000262640 TSHZ2Q9NRE2 1034 aa16.22■□□□□ 0.19
VAMP7-201ENST00000262640 CRKLP46109 303 aaKnown RBP16.22■□□□□ 0.19
VAMP7-201ENST00000262640 CHD1LQ86WJ1 897 aa16.22■□□□□ 0.19
VAMP7-201ENST00000262640 INTS5Q6P9B9 1019 aaKnown RBP16.21■□□□□ 0.19
VAMP7-201ENST00000262640 KRT27Q7Z3Y8 459 aa16.21■□□□□ 0.19
VAMP7-201ENST00000262640 NPM2Q86SE8 214 aaKnown RBP16.21■□□□□ 0.19
VAMP7-201ENST00000262640 RREB1Q92766 1687 aa16.21■□□□□ 0.19
VAMP7-201ENST00000262640 BTAF1O14981 1849 aa16.21■□□□□ 0.19
VAMP7-201ENST00000262640 ANKRD45Q5TZF3 282 aa16.21■□□□□ 0.18
VAMP7-201ENST00000262640 PTF1AQ7RTS3 328 aa16.21■□□□□ 0.18
VAMP7-201ENST00000262640 MAP3K15Q6ZN16 1313 aa16.2■□□□□ 0.18
VAMP7-201ENST00000262640 PNMA6EA0A0J9YXQ4 647 aa16.2■□□□□ 0.18
VAMP7-201ENST00000262640 ATP5J2-PTCD1G3V325 749 aa16.2■□□□□ 0.18
VAMP7-201ENST00000262640 FAM196AQ6ZSG2 479 aa16.2■□□□□ 0.18
VAMP7-201ENST00000262640 SSH3Q8TE77 659 aa16.2■□□□□ 0.18
VAMP7-201ENST00000262640 MTX1Q13505 466 aa16.2■□□□□ 0.18
VAMP7-201ENST00000262640 BCL11BQ9C0K0 894 aaPredicted RBP16.2■□□□□ 0.18
VAMP7-201ENST00000262640 EIF5P55010 431 aaKnown RBP16.19■□□□□ 0.18
VAMP7-201ENST00000262640 TCIRG1Q13488 830 aa16.19■□□□□ 0.18
VAMP7-201ENST00000262640 CCDC191Q8NCU4 936 aa16.19■□□□□ 0.18
VAMP7-201ENST00000262640 CWC25Q9NXE8 425 aaPredicted RBP16.19■□□□□ 0.18
VAMP7-201ENST00000262640 SBF2Q86WG5 1849 aa16.19■□□□□ 0.18
VAMP7-201ENST00000262640 POLA2Q14181 598 aa16.19■□□□□ 0.18
VAMP7-201ENST00000262640 PPP1R42Q7Z4L9 355 aa16.19■□□□□ 0.18
VAMP7-201ENST00000262640 SUCLG2Q96I99 432 aa16.19■□□□□ 0.18
VAMP7-201ENST00000262640 LNPKQ9C0E8 428 aa16.19■□□□□ 0.18
VAMP7-201ENST00000262640 COL15A1P39059 1388 aa16.18■□□□□ 0.18
VAMP7-201ENST00000262640 COL5A3P25940 1745 aaPredicted RBP16.18■□□□□ 0.18
VAMP7-201ENST00000262640 ERVV-1B6SEH8 477 aa16.18■□□□□ 0.18
VAMP7-201ENST00000262640 PDE4AP27815 886 aa16.18■□□□□ 0.18
VAMP7-201ENST00000262640 HSP90AB3PQ58FF7 597 aa16.18■□□□□ 0.18
VAMP7-201ENST00000262640 ISCA1Q9BUE6 129 aa16.18■□□□□ 0.18
VAMP7-201ENST00000262640 ZBTB47Q9UFB7 747 aaPredicted RBP16.18■□□□□ 0.18
VAMP7-201ENST00000262640 AFDNP55196 1824 aaKnown RBP16.18■□□□□ 0.18
VAMP7-201ENST00000262640 A0A087WZG4 1122 aa16.18■□□□□ 0.18
VAMP7-201ENST00000262640 TRIM28Q13263 835 aaKnown RBP16.18■□□□□ 0.18
VAMP7-201ENST00000262640 GIGYF2Q6Y7W6 1299 aaKnown RBP16.18■□□□□ 0.18
VAMP7-201ENST00000262640 ARXQ96QS3 562 aa16.18■□□□□ 0.18
VAMP7-201ENST00000262640 SRGAP3O43295 1099 aa16.17■□□□□ 0.18
VAMP7-201ENST00000262640 DZIP3Q86Y13 1208 aaKnown RBP16.17■□□□□ 0.18
VAMP7-201ENST00000262640 LINC00116Q8NCU8 138 aa16.17■□□□□ 0.18
VAMP7-201ENST00000262640 CNTNAP4Q9C0A0 1308 aa16.17■□□□□ 0.18
VAMP7-201ENST00000262640 BRWD3Q6RI45 1802 aa16.16■□□□□ 0.18
VAMP7-201ENST00000262640 H7C1W4 665 aa16.16■□□□□ 0.18
VAMP7-201ENST00000262640 KAZALD1Q96I82 304 aa16.16■□□□□ 0.18
VAMP7-201ENST00000262640 RXRBP28702 533 aa16.16■□□□□ 0.18
VAMP7-201ENST00000262640 CASP7P55210 303 aa16.16■□□□□ 0.18
VAMP7-201ENST00000262640 UBE3BQ7Z3V4 1068 aa16.16■□□□□ 0.18
VAMP7-201ENST00000262640 BICC1Q9H694 974 aaKnown RBP16.16■□□□□ 0.18
VAMP7-201ENST00000262640 RC3H1Q5TC82 1133 aaKnown RBP16.15■□□□□ 0.18
VAMP7-201ENST00000262640 CCNL1Q9UK58 526 aaPredicted RBP16.15■□□□□ 0.18
VAMP7-201ENST00000262640 EXOC6BQ9Y2D4 811 aa16.14■□□□□ 0.18
VAMP7-201ENST00000262640 LY75O60449 1722 aa16.14■□□□□ 0.17
VAMP7-201ENST00000262640 HLFQ16534 295 aa16.14■□□□□ 0.17
VAMP7-201ENST00000262640 TBC1D2BQ9UPU7 963 aa16.14■□□□□ 0.17
VAMP7-201ENST00000262640 RAB11FIP3O75154 756 aa16.13■□□□□ 0.17
VAMP7-201ENST00000262640 HSP90AB4PQ58FF6 505 aa16.13■□□□□ 0.17
VAMP7-201ENST00000262640 MYH14Q7Z406 1995 aaKnown RBP16.13■□□□□ 0.17
VAMP7-201ENST00000262640 FAM161AQ3B820 660 aa16.13■□□□□ 0.17
VAMP7-201ENST00000262640 SURF6O75683 361 aaKnown RBP16.12■□□□□ 0.17
VAMP7-201ENST00000262640 RABL6Q3YEC7 729 aaPredicted RBP16.12■□□□□ 0.17
VAMP7-201ENST00000262640 LRRCC1Q9C099 1032 aa16.12■□□□□ 0.17
VAMP7-201ENST00000262640 NOP58Q9Y2X3 529 aaKnown RBP16.12■□□□□ 0.17
VAMP7-201ENST00000262640 APBB1O00213 710 aa16.12■□□□□ 0.17
VAMP7-201ENST00000262640 KCNQ4P56696 695 aa16.12■□□□□ 0.17
VAMP7-201ENST00000262640 BACH2Q9BYV9 841 aa16.12■□□□□ 0.17
VAMP7-201ENST00000262640 EPHA10Q5JZY3 1008 aa16.11■□□□□ 0.17
VAMP7-201ENST00000262640 JARID2Q92833 1246 aaPredicted RBP16.11■□□□□ 0.17
VAMP7-201ENST00000262640 CAMTA2O94983 1202 aa16.11■□□□□ 0.17
VAMP7-201ENST00000262640 PCCAP05165 728 aaPredicted RBP16.11■□□□□ 0.17
VAMP7-201ENST00000262640 NLRP10Q86W26 655 aa16.11■□□□□ 0.17
VAMP7-201ENST00000262640 ANKRD36CQ5JPF3 1778 aa16.11■□□□□ 0.17
VAMP7-201ENST00000262640 SMARCA5O60264 1052 aaPredicted RBP16.1■□□□□ 0.17
VAMP7-201ENST00000262640 TRIM37O94972 964 aa16.1■□□□□ 0.17
VAMP7-201ENST00000262640 RGS17Q9UGC6 210 aaPredicted RBP16.1■□□□□ 0.17
VAMP7-201ENST00000262640 RGL2O15211 777 aa16.1■□□□□ 0.17
VAMP7-201ENST00000262640 RPS6KA4O75676 772 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms