RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 MBD3O95983 291 aa16.42■□□□□ 0.22
CDH1-201ENST00000261769 IL15P40933 162 aaPredicted RBP16.41■□□□□ 0.22
CDH1-201ENST00000261769 LARP1BQ659C4 914 aaKnown RBP16.41■□□□□ 0.22
CDH1-201ENST00000261769 ATP2B3Q16720 1220 aa16.41■□□□□ 0.22
CDH1-201ENST00000261769 EYA3Q99504 573 aa16.41■□□□□ 0.22
CDH1-201ENST00000261769 BMP2KQ9NSY1 1161 aaPredicted RBP16.41■□□□□ 0.22
CDH1-201ENST00000261769 MBD5Q9P267 1494 aa16.41■□□□□ 0.22
CDH1-201ENST00000261769 EFCAB6Q5THR3 1501 aa16.41■□□□□ 0.22
CDH1-201ENST00000261769 RANBP6O60518 1105 aaKnown RBP16.41■□□□□ 0.22
CDH1-201ENST00000261769 LMBR1LQ6UX01 489 aa16.41■□□□□ 0.22
CDH1-201ENST00000261769 WDR33Q9C0J8 1336 aaKnown RBP16.41■□□□□ 0.22
CDH1-201ENST00000261769 PARD3Q8TEW0 1356 aa16.41■□□□□ 0.22
CDH1-201ENST00000261769 FEZ1Q99689 392 aa16.41■□□□□ 0.22
CDH1-201ENST00000261769 NLRP1Q9C000 1473 aa16.4■□□□□ 0.22
CDH1-201ENST00000261769 TNIP1Q15025 636 aa16.4■□□□□ 0.22
CDH1-201ENST00000261769 PARP10Q53GL7 1025 aa16.4■□□□□ 0.22
CDH1-201ENST00000261769 GOLIM4O00461 696 aa16.39■□□□□ 0.21
CDH1-201ENST00000261769 PDE4BQ07343 736 aa16.39■□□□□ 0.21
CDH1-201ENST00000261769 ZNF804AQ7Z570 1209 aa16.39■□□□□ 0.21
CDH1-201ENST00000261769 CCDC96Q2M329 555 aa16.39■□□□□ 0.21
CDH1-201ENST00000261769 DDX21Q9NR30 783 aaKnown RBP eCLIP16.39■□□□□ 0.21
CDH1-201ENST00000261769 CRNKL1Q9BZJ0 848 aaKnown RBP16.39■□□□□ 0.21
CDH1-201ENST00000261769 FAM13BQ9NYF5 915 aa16.39■□□□□ 0.21
CDH1-201ENST00000261769 KDM5DQ9BY66 1539 aa16.39■□□□□ 0.21
CDH1-201ENST00000261769 CT47A1Q5JQC4 288 aaPredicted RBP16.39■□□□□ 0.21
CDH1-201ENST00000261769 LETM1O95202 739 aaPredicted RBP16.38■□□□□ 0.21
CDH1-201ENST00000261769 CCDC70Q6NSX1 233 aa16.38■□□□□ 0.21
CDH1-201ENST00000261769 C8orf58Q8NAV2 365 aa16.38■□□□□ 0.21
CDH1-201ENST00000261769 ZFYP08048 801 aaPredicted RBP16.38■□□□□ 0.21
CDH1-201ENST00000261769 KRT85P78386 507 aa16.38■□□□□ 0.21
CDH1-201ENST00000261769 JARID2Q92833 1246 aaPredicted RBP16.38■□□□□ 0.21
CDH1-201ENST00000261769 ANKRD2Q9GZV1 360 aa16.38■□□□□ 0.21
CDH1-201ENST00000261769 SNRKQ9NRH2 765 aa16.38■□□□□ 0.21
CDH1-201ENST00000261769 ZNF790Q6PG37 636 aa16.38■□□□□ 0.21
CDH1-201ENST00000261769 A0A0U1RQG5 324 aaPredicted RBP16.37■□□□□ 0.21
CDH1-201ENST00000261769 IRS4O14654 1257 aaPredicted RBP16.37■□□□□ 0.21
CDH1-201ENST00000261769 NPC1L1Q9UHC9 1359 aa16.37■□□□□ 0.21
CDH1-201ENST00000261769 K7ELQ4 463 aaPredicted RBP16.37■□□□□ 0.21
CDH1-201ENST00000261769 PPP4R3BQ5MIZ7 849 aa16.37■□□□□ 0.21
CDH1-201ENST00000261769 UGGT1Q9NYU2 1555 aa16.37■□□□□ 0.21
CDH1-201ENST00000261769 HOXB7P09629 217 aa16.37■□□□□ 0.21
CDH1-201ENST00000261769 CASTP20810 708 aaKnown RBP16.37■□□□□ 0.21
CDH1-201ENST00000261769 STIM1Q13586 685 aa16.37■□□□□ 0.21
CDH1-201ENST00000261769 WDR78Q5VTH9 848 aa16.37■□□□□ 0.21
CDH1-201ENST00000261769 PRPF40BQ6NWY9 871 aaKnown RBP16.37■□□□□ 0.21
CDH1-201ENST00000261769 CNBD1Q8NA66 436 aa16.37■□□□□ 0.21
CDH1-201ENST00000261769 DDX17Q92841 729 aaKnown RBP16.37■□□□□ 0.21
CDH1-201ENST00000261769 PRIM1P49642 420 aaKnown RBP16.37■□□□□ 0.21
CDH1-201ENST00000261769 RTN4Q9NQC3 1192 aaKnown RBP16.37■□□□□ 0.21
CDH1-201ENST00000261769 TRPC5Q9UL62 973 aaPredicted RBP16.37■□□□□ 0.21
CDH1-201ENST00000261769 NSFL1CQ9UNZ2 370 aaKnown RBP16.36■□□□□ 0.21
CDH1-201ENST00000261769 FIBPO43427 364 aa16.36■□□□□ 0.21
CDH1-201ENST00000261769 RHPN1Q8TCX5 695 aa16.36■□□□□ 0.21
CDH1-201ENST00000261769 MAGEC2Q9UBF1 373 aaPredicted RBP16.36■□□□□ 0.21
CDH1-201ENST00000261769 ME1P48163 572 aa16.36■□□□□ 0.21
CDH1-201ENST00000261769 CUL5Q93034 780 aa16.36■□□□□ 0.21
CDH1-201ENST00000261769 RSPH6AQ9H0K4 717 aa16.36■□□□□ 0.21
CDH1-201ENST00000261769 PHACTR3Q96KR7 559 aa16.36■□□□□ 0.21
CDH1-201ENST00000261769 CFAP45Q9UL16 551 aa16.36■□□□□ 0.21
CDH1-201ENST00000261769 NF2P35240 595 aa16.35■□□□□ 0.21
CDH1-201ENST00000261769 ODF2Q5BJF6 829 aa16.35■□□□□ 0.21
CDH1-201ENST00000261769 FILIP1LQ4L180 1135 aa16.35■□□□□ 0.21
CDH1-201ENST00000261769 CEBPZQ03701 1054 aaKnown RBP16.35■□□□□ 0.21
CDH1-201ENST00000261769 CATIPQ7Z7H3 387 aa16.35■□□□□ 0.21
CDH1-201ENST00000261769 ZHX3Q9H4I2 956 aa16.35■□□□□ 0.21
CDH1-201ENST00000261769 EHMT1Q9H9B1 1298 aa16.35■□□□□ 0.21
CDH1-201ENST00000261769 IFIT3O14879 490 aaKnown RBP16.35■□□□□ 0.21
CDH1-201ENST00000261769 APBA3O96018 575 aa16.35■□□□□ 0.21
CDH1-201ENST00000261769 RBM17Q96I25 401 aaKnown RBP16.35■□□□□ 0.21
CDH1-201ENST00000261769 SLC12A7Q9Y666 1083 aa16.35■□□□□ 0.21
CDH1-201ENST00000261769 SAMD9LQ8IVG5 1584 aa16.34■□□□□ 0.21
CDH1-201ENST00000261769 IL13P35225 146 aa16.34■□□□□ 0.21
CDH1-201ENST00000261769 CEP131Q9UPN4 1083 aa16.34■□□□□ 0.21
CDH1-201ENST00000261769 CLEC11AQ9Y240 323 aa16.34■□□□□ 0.21
CDH1-201ENST00000261769 PIBF1Q8WXW3 757 aa16.34■□□□□ 0.21
CDH1-201ENST00000261769 MAGI3Q5TCQ9 1506 aa16.34■□□□□ 0.21
CDH1-201ENST00000261769 ZCCHC11Q5TAX3 1644 aaKnown RBP16.34■□□□□ 0.21
CDH1-201ENST00000261769 ZNF772Q68DY9 489 aaPredicted RBP16.34■□□□□ 0.21
CDH1-201ENST00000261769 MRPL50Q8N5N7 158 aaKnown RBP16.34■□□□□ 0.21
CDH1-201ENST00000261769 TSPOAP1O95153 1857 aa16.34■□□□□ 0.21
CDH1-201ENST00000261769 MEIS3Q99687 375 aa16.34■□□□□ 0.21
CDH1-201ENST00000261769 KIF5BP33176 963 aa16.33■□□□□ 0.21
CDH1-201ENST00000261769 SH3TC1Q8TE82 1336 aa16.33■□□□□ 0.2
CDH1-201ENST00000261769 TRAF1Q13077 416 aa16.33■□□□□ 0.2
CDH1-201ENST00000261769 FLAD1Q8NFF5 587 aa16.33■□□□□ 0.2
CDH1-201ENST00000261769 SLC52A2Q9HAB3 445 aa16.33■□□□□ 0.2
CDH1-201ENST00000261769 CCDC87Q9NVE4 849 aa16.33■□□□□ 0.2
CDH1-201ENST00000261769 TSPY2A6NKD2 308 aa16.33■□□□□ 0.2
CDH1-201ENST00000261769 C20orf194Q5TEA3 1177 aa16.33■□□□□ 0.2
CDH1-201ENST00000261769 SSBP05455 408 aaKnown RBP eCLIP16.33■□□□□ 0.2
CDH1-201ENST00000261769 CCDC178Q5BJE1 867 aa16.33■□□□□ 0.2
CDH1-201ENST00000261769 DACH1Q9UI36 760 aa16.33■□□□□ 0.2
CDH1-201ENST00000261769 ERVV-2B6SEH9 535 aa16.32■□□□□ 0.2
CDH1-201ENST00000261769 PLCG2P16885 1265 aa16.32■□□□□ 0.2
CDH1-201ENST00000261769 ATP8B2P98198 1209 aa16.32■□□□□ 0.2
CDH1-201ENST00000261769 SH2B1Q9NRF2 756 aaPredicted RBP16.32■□□□□ 0.2
CDH1-201ENST00000261769 HECW2Q9P2P5 1572 aa16.32■□□□□ 0.2
CDH1-201ENST00000261769 CFAP65Q6ZU64 1925 aaKnown RBP16.32■□□□□ 0.2
CDH1-201ENST00000261769 BACH2Q9BYV9 841 aa16.32■□□□□ 0.2
CDH1-201ENST00000261769 CYP7A1P22680 504 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms