RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 IER5Q5VY09 327 aa7.97□□□□□ -1.13
CCDC54-201ENST00000261058 GLYCTKQ8IVS8 523 aa7.97□□□□□ -1.13
CCDC54-201ENST00000261058 SLC35F4A4IF30 521 aa7.96□□□□□ -1.13
CCDC54-201ENST00000261058 FAM13AO94988 1023 aa7.96□□□□□ -1.13
CCDC54-201ENST00000261058 MPSTP25325 297 aa7.96□□□□□ -1.13
CCDC54-201ENST00000261058 BRD2P25440 801 aaKnown RBP7.96□□□□□ -1.13
CCDC54-201ENST00000261058 DGKZQ13574 1117 aa7.96□□□□□ -1.13
CCDC54-201ENST00000261058 ETFBKMTQ8IXQ9 262 aa7.96□□□□□ -1.13
CCDC54-201ENST00000261058 AIDAQ96BJ3 306 aa7.96□□□□□ -1.13
CCDC54-201ENST00000261058 ZIC5Q96T25 663 aa7.96□□□□□ -1.13
CCDC54-201ENST00000261058 KLK14Q9P0G3 267 aa7.96□□□□□ -1.13
CCDC54-201ENST00000261058 GMPR2Q9P2T1 348 aaKnown RBP7.96□□□□□ -1.13
CCDC54-201ENST00000261058 DMGDHQ9UI17 866 aaKnown RBP7.96□□□□□ -1.13
CCDC54-201ENST00000261058 SOBPA7XYQ1 873 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 F11P03951 625 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 PTSQ03393 145 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 HIF1AQ16665 826 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 ABTB2Q8N961 1025 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 RHPN1Q8TCX5 695 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 CCDC9Q9Y3X0 531 aaKnown RBP7.95□□□□□ -1.14
CCDC54-201ENST00000261058 TGFBR3LH3BV60 316 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 ZBTB39O15060 712 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 MFAP1P55081 439 aaKnown RBP7.95□□□□□ -1.14
CCDC54-201ENST00000261058 CCDC27Q2M243 656 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 IFT43Q96FT9 208 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 SUSD3Q96L08 255 aa7.95□□□□□ -1.14
CCDC54-201ENST00000261058 C11orf95C9JLR9 678 aaPredicted RBP7.94□□□□□ -1.14
CCDC54-201ENST00000261058 THBS1P07996 1170 aa7.94□□□□□ -1.14
CCDC54-201ENST00000261058 EIF1AXP47813 144 aaKnown RBP7.94□□□□□ -1.14
CCDC54-201ENST00000261058 LBRQ14739 615 aaKnown RBP7.94□□□□□ -1.14
CCDC54-201ENST00000261058 DNAJC14Q6Y2X3 702 aaPredicted RBP7.94□□□□□ -1.14
CCDC54-201ENST00000261058 A0A1W2PNR3 127 aa7.93□□□□□ -1.14
CCDC54-201ENST00000261058 SNRPBP14678 240 aaKnown RBP7.93□□□□□ -1.14
CCDC54-201ENST00000261058 NOM1Q5C9Z4 860 aaKnown RBP7.93□□□□□ -1.14
CCDC54-201ENST00000261058 LCE2AQ5TA79 106 aaPredicted RBP7.93□□□□□ -1.14
CCDC54-201ENST00000261058 SAMD5Q5TGI4 173 aa7.93□□□□□ -1.14
CCDC54-201ENST00000261058 ALKBH2Q6NS38 261 aa7.93□□□□□ -1.14
CCDC54-201ENST00000261058 NLRP8Q86W28 1048 aa7.93□□□□□ -1.14
CCDC54-201ENST00000261058 ZNF280CQ8ND82 737 aa7.93□□□□□ -1.14
CCDC54-201ENST00000261058 FZD6O60353 706 aa7.92□□□□□ -1.14
CCDC54-201ENST00000261058 UBAP2LQ14157 1087 aaKnown RBP7.92□□□□□ -1.14
CCDC54-201ENST00000261058 RGS22Q8NE09 1264 aa7.92□□□□□ -1.14
CCDC54-201ENST00000261058 ANKIB1Q9P2G1 1089 aa7.92□□□□□ -1.14
CCDC54-201ENST00000261058 TREML1Q86YW5 311 aa7.91□□□□□ -1.14
CCDC54-201ENST00000261058 CCDC155Q8N6L0 562 aa7.91□□□□□ -1.14
CCDC54-201ENST00000261058 HSH2DQ96JZ2 352 aa7.91□□□□□ -1.14
CCDC54-201ENST00000261058 RUBCNLQ9H714 662 aa7.91□□□□□ -1.14
CCDC54-201ENST00000261058 GPAMQ9HCL2 828 aa7.91□□□□□ -1.14
CCDC54-201ENST00000261058 BIN2Q9UBW5 565 aaPredicted RBP7.91□□□□□ -1.14
CCDC54-201ENST00000261058 DCTN4Q9UJW0 460 aa7.91□□□□□ -1.14
CCDC54-201ENST00000261058 OPLAHO14841 1288 aa7.9□□□□□ -1.14
CCDC54-201ENST00000261058 WFS1O76024 890 aa7.9□□□□□ -1.14
CCDC54-201ENST00000261058 MICAL2O94851 1124 aa7.9□□□□□ -1.14
CCDC54-201ENST00000261058 MARSP56192 900 aaKnown RBP7.9□□□□□ -1.14
CCDC54-201ENST00000261058 ARSJQ5FYB0 599 aaPredicted RBP7.9□□□□□ -1.14
CCDC54-201ENST00000261058 BICDL1Q6ZP65 573 aa7.9□□□□□ -1.14
CCDC54-201ENST00000261058 RBCK1Q9BYM8 510 aa7.9□□□□□ -1.14
CCDC54-201ENST00000261058 IGHA2P01877 340 aa7.89□□□□□ -1.15
CCDC54-201ENST00000261058 INPP5BP32019 993 aa7.89□□□□□ -1.15
CCDC54-201ENST00000261058 ZAP70P43403 619 aa7.89□□□□□ -1.15
CCDC54-201ENST00000261058 TYRO3Q06418 890 aa7.89□□□□□ -1.15
CCDC54-201ENST00000261058 BTLAQ7Z6A9 289 aa7.89□□□□□ -1.15
CCDC54-201ENST00000261058 GMCL1Q96IK5 515 aa7.89□□□□□ -1.15
CCDC54-201ENST00000261058 CITED4Q96RK1 184 aa7.89□□□□□ -1.15
CCDC54-201ENST00000261058 GAS2L1Q99501 681 aaPredicted RBP7.89□□□□□ -1.15
CCDC54-201ENST00000261058 CUEDC1Q9NWM3 386 aaPredicted RBP7.89□□□□□ -1.15
CCDC54-201ENST00000261058 LRRC69Q6ZNQ3 347 aa7.88□□□□□ -1.15
CCDC54-201ENST00000261058 ATCAYQ86WG3 371 aa7.88□□□□□ -1.15
CCDC54-201ENST00000261058 TRIM22Q8IYM9 498 aa7.88□□□□□ -1.15
CCDC54-201ENST00000261058 PGBD3Q8N328 593 aa7.88□□□□□ -1.15
CCDC54-201ENST00000261058 ASB16Q96NS5 453 aa7.88□□□□□ -1.15
CCDC54-201ENST00000261058 EFSO43281 561 aa7.87□□□□□ -1.15
CCDC54-201ENST00000261058 ERCC3P19447 782 aa7.87□□□□□ -1.15
CCDC54-201ENST00000261058 ITGA6P23229 1130 aa7.87□□□□□ -1.15
CCDC54-201ENST00000261058 MZF1P28698 734 aaPredicted RBP7.87□□□□□ -1.15
CCDC54-201ENST00000261058 GRNP28799 593 aaKnown RBP7.87□□□□□ -1.15
CCDC54-201ENST00000261058 IDH3AP50213 366 aa7.87□□□□□ -1.15
CCDC54-201ENST00000261058 DBN1Q16643 649 aa7.87□□□□□ -1.15
CCDC54-201ENST00000261058 EFHC2Q5JST6 749 aa7.87□□□□□ -1.15
CCDC54-201ENST00000261058 GJD3Q8N144 294 aa7.87□□□□□ -1.15
CCDC54-201ENST00000261058 NDFIP2Q9NV92 336 aa7.87□□□□□ -1.15
CCDC54-201ENST00000261058 CCDC87Q9NVE4 849 aa7.87□□□□□ -1.15
CCDC54-201ENST00000261058 H7C1W4 665 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 FAM157BP0CG42 384 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 KCNQ4P56696 695 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 RGL4Q8IZJ4 473 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 FAM129BQ96TA1 746 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 C11orf16Q9NQ32 467 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 NDUFB5O43674 189 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 PDGFAP04085 211 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 ARSDP51689 593 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 FIGNL1Q6PIW4 674 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 ZNF837Q96EG3 531 aaPredicted RBP7.86□□□□□ -1.15
CCDC54-201ENST00000261058 ZCCHC2Q9C0B9 1178 aaKnown RBP7.86□□□□□ -1.15
CCDC54-201ENST00000261058 NUCKS1Q9H1E3 243 aaKnown RBP7.86□□□□□ -1.15
CCDC54-201ENST00000261058 FAM13BQ9NYF5 915 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 HCN2Q9UL51 889 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 BRPF3Q9ULD4 1205 aa7.86□□□□□ -1.15
CCDC54-201ENST00000261058 PPFIA3O75145 1194 aa7.85□□□□□ -1.15
CCDC54-201ENST00000261058 MAPK1P28482 360 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms