RNA–Protein interactions for RNA: ENST00000260643.6

PREB-201, Transcript of prolactin regulatory element binding, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREB, Length 2,166 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-201ENST00000260643 HOXC9P31274 260 aa27.94■■■□□ 2.06
PREB-201ENST00000260643 BEND3Q5T5X7 828 aa27.94■■■□□ 2.06
PREB-201ENST00000260643 CHMP4AQ9BY43 222 aa27.94■■■□□ 2.06
PREB-201ENST00000260643 CEMIPQ8WUJ3 1361 aa27.94■■■□□ 2.06
PREB-201ENST00000260643 MTX1Q13505 466 aa27.94■■■□□ 2.06
PREB-201ENST00000260643 NBPF7P0C2Y1 421 aaPredicted RBP27.93■■■□□ 2.06
PREB-201ENST00000260643 KIAA1524Q8TCG1 905 aa27.93■■■□□ 2.06
PREB-201ENST00000260643 PDRG1Q9NUG6 133 aa27.93■■■□□ 2.06
PREB-201ENST00000260643 SPG7Q9UQ90 795 aa27.93■■■□□ 2.06
PREB-201ENST00000260643 USP54Q70EL1 1684 aa27.93■■■□□ 2.06
PREB-201ENST00000260643 GIMAP6Q6P9H5 292 aa27.93■■■□□ 2.06
PREB-201ENST00000260643 ZNF710Q8N1W2 664 aa27.93■■■□□ 2.06
PREB-201ENST00000260643 MED1Q15648 1581 aaPredicted RBP27.92■■■□□ 2.06
PREB-201ENST00000260643 DNM1Q05193 864 aaKnown RBP27.92■■■□□ 2.06
PREB-201ENST00000260643 DIAPH3Q9NSV4 1193 aa27.92■■■□□ 2.06
PREB-201ENST00000260643 CCDC83Q8IWF9 413 aa27.91■■■□□ 2.06
PREB-201ENST00000260643 MPNDQ8N594 471 aa27.91■■■□□ 2.06
PREB-201ENST00000260643 CYP46A1Q9Y6A2 500 aa27.91■■■□□ 2.06
PREB-201ENST00000260643 AP5Z1O43299 807 aa27.9■■■□□ 2.06
PREB-201ENST00000260643 LTKP29376 864 aa27.9■■■□□ 2.06
PREB-201ENST00000260643 NGDNQ8NEJ9 315 aaKnown RBP27.9■■■□□ 2.06
PREB-201ENST00000260643 DNAAF4Q8WXU2 420 aa27.9■■■□□ 2.06
PREB-201ENST00000260643 LARP6Q9BRS8 491 aaKnown RBP27.9■■■□□ 2.06
PREB-201ENST00000260643 KIF3AQ9Y496 699 aa27.9■■■□□ 2.06
PREB-201ENST00000260643 CCDC192P0DO97 292 aa27.89■■■□□ 2.06
PREB-201ENST00000260643 PTH1RQ03431 593 aa27.89■■■□□ 2.06
PREB-201ENST00000260643 ST3GAL1Q11201 340 aa27.89■■■□□ 2.06
PREB-201ENST00000260643 NECTIN1Q15223 517 aa27.89■■■□□ 2.06
PREB-201ENST00000260643 TSPOAP1O95153 1857 aa27.89■■■□□ 2.06
PREB-201ENST00000260643 DIP2AQ14689 1571 aa27.89■■■□□ 2.06
PREB-201ENST00000260643 ELP1O95163 1332 aa27.89■■■□□ 2.06
PREB-201ENST00000260643 CPA1P15085 419 aa27.89■■■□□ 2.05
PREB-201ENST00000260643 JAKMIP1Q96N16 626 aaKnown RBP27.89■■■□□ 2.05
PREB-201ENST00000260643 CCDC171Q6TFL3 1326 aa27.88■■■□□ 2.05
PREB-201ENST00000260643 EIF4A1P60842 406 aaKnown RBP27.88■■■□□ 2.05
PREB-201ENST00000260643 ADCK5Q3MIX3 580 aa27.88■■■□□ 2.05
PREB-201ENST00000260643 C17orf53Q8N3J3 647 aaPredicted RBP27.88■■■□□ 2.05
PREB-201ENST00000260643 KCNF1Q9H3M0 494 aa27.88■■■□□ 2.05
PREB-201ENST00000260643 ECHDC1Q9NTX5 307 aa27.87■■■□□ 2.05
PREB-201ENST00000260643 MARF1Q9Y4F3 1742 aaKnown RBP27.87■■■□□ 2.05
PREB-201ENST00000260643 CHD2O14647 1828 aaKnown RBP27.87■■■□□ 2.05
PREB-201ENST00000260643 GOLGA6L6A8MZA4 724 aa27.86■■■□□ 2.05
PREB-201ENST00000260643 CLASRPQ8N2M8 674 aaKnown RBP27.86■■■□□ 2.05
PREB-201ENST00000260643 NLRP6P59044 892 aa27.86■■■□□ 2.05
PREB-201ENST00000260643 ME3Q16798 604 aa27.86■■■□□ 2.05
PREB-201ENST00000260643 PRPF40BQ6NWY9 871 aaKnown RBP27.86■■■□□ 2.05
PREB-201ENST00000260643 SNRKQ9NRH2 765 aa27.86■■■□□ 2.05
PREB-201ENST00000260643 PI4KAP2A4QPH2 592 aa27.84■■■□□ 2.05
PREB-201ENST00000260643 PI4KAP1Q8N8J0 262 aa27.84■■■□□ 2.05
PREB-201ENST00000260643 FAM200AQ8TCP9 573 aa27.84■■■□□ 2.05
PREB-201ENST00000260643 EVI5LQ96CN4 794 aa27.84■■■□□ 2.05
PREB-201ENST00000260643 GPATCH3Q96I76 525 aa27.84■■■□□ 2.05
PREB-201ENST00000260643 KDM3BQ7LBC6 1761 aa27.84■■■□□ 2.05
PREB-201ENST00000260643 ANKARQ7Z5J8 1434 aa27.84■■■□□ 2.05
PREB-201ENST00000260643 ZKSCAN1P17029 563 aaPredicted RBP27.83■■■□□ 2.05
PREB-201ENST00000260643 ERC1Q8IUD2 1116 aa27.83■■■□□ 2.05
PREB-201ENST00000260643 CHPF2Q9P2E5 772 aa27.83■■■□□ 2.05
PREB-201ENST00000260643 AMOTL2Q9Y2J4 779 aa27.83■■■□□ 2.05
PREB-201ENST00000260643 ADCY9O60503 1353 aa27.83■■■□□ 2.05
PREB-201ENST00000260643 KRT85P78386 507 aa27.83■■■□□ 2.05
PREB-201ENST00000260643 PYCARDQ9ULZ3 195 aa27.83■■■□□ 2.05
PREB-201ENST00000260643 ADGRL3Q9HAR2 1447 aa27.82■■■□□ 2.04
PREB-201ENST00000260643 JARID2Q92833 1246 aaPredicted RBP27.82■■■□□ 2.04
PREB-201ENST00000260643 ALDH8A1Q9H2A2 487 aaPredicted RBP27.82■■■□□ 2.04
PREB-201ENST00000260643 TTC6Q86TZ1 520 aa27.82■■■□□ 2.04
PREB-201ENST00000260643 MAP4K1Q92918 833 aa27.82■■■□□ 2.04
PREB-201ENST00000260643 PDCP20941 246 aa27.81■■■□□ 2.04
PREB-201ENST00000260643 UTP14CQ5TAP6 766 aaKnown RBP27.81■■■□□ 2.04
PREB-201ENST00000260643 VPS37CA5D8V6 355 aaPredicted RBP27.8■■■□□ 2.04
PREB-201ENST00000260643 HIP1O00291 1037 aa27.8■■■□□ 2.04
PREB-201ENST00000260643 RGPD8O14715 1765 aaPredicted RBP27.8■■■□□ 2.04
PREB-201ENST00000260643 EIF2S2P20042 333 aaKnown RBP27.8■■■□□ 2.04
PREB-201ENST00000260643 OS9Q13438 667 aaPredicted RBP27.8■■■□□ 2.04
PREB-201ENST00000260643 MAP3K11Q16584 847 aa27.8■■■□□ 2.04
PREB-201ENST00000260643 TSC1Q92574 1164 aa27.8■■■□□ 2.04
PREB-201ENST00000260643 KIF13AQ9H1H9 1805 aa27.8■■■□□ 2.04
PREB-201ENST00000260643 TPCN1Q9ULQ1 816 aa27.8■■■□□ 2.04
PREB-201ENST00000260643 TBX22Q9Y458 520 aa27.8■■■□□ 2.04
PREB-201ENST00000260643 ALDH1L1O75891 902 aa27.8■■■□□ 2.04
PREB-201ENST00000260643 CREB3L3Q68CJ9 461 aa27.8■■■□□ 2.04
PREB-201ENST00000260643 BCL2L12Q9HB09 334 aa27.8■■■□□ 2.04
PREB-201ENST00000260643 HDAC5Q9UQL6 1122 aa27.8■■■□□ 2.04
PREB-201ENST00000260643 PSMA5P28066 241 aa27.79■■■□□ 2.04
PREB-201ENST00000260643 LARP1BQ659C4 914 aaKnown RBP27.79■■■□□ 2.04
PREB-201ENST00000260643 SLC26A8Q96RN1 970 aa27.79■■■□□ 2.04
PREB-201ENST00000260643 NUP62CLQ9H1M0 184 aa27.79■■■□□ 2.04
PREB-201ENST00000260643 PLCB2Q00722 1185 aa27.79■■■□□ 2.04
PREB-201ENST00000260643 CHAF1AQ13111 956 aaPredicted RBP27.79■■■□□ 2.04
PREB-201ENST00000260643 RBM8AQ9Y5S9 174 aaKnown RBP27.79■■■□□ 2.04
PREB-201ENST00000260643 MRVI1Q9Y6F6 885 aa27.79■■■□□ 2.04
PREB-201ENST00000260643 TPRNQ4KMQ1 711 aa27.78■■■□□ 2.04
PREB-201ENST00000260643 RBM43Q6ZSC3 357 aaKnown RBP27.78■■■□□ 2.04
PREB-201ENST00000260643 ZBTB7CA1YPR0 619 aa27.77■■■□□ 2.04
PREB-201ENST00000260643 CTIFO43310 598 aaKnown RBP27.77■■■□□ 2.04
PREB-201ENST00000260643 IFIT2P09913 472 aaKnown RBP27.77■■■□□ 2.04
PREB-201ENST00000260643 TYRO3Q06418 890 aa27.77■■■□□ 2.04
PREB-201ENST00000260643 ANKRD1Q15327 319 aa27.77■■■□□ 2.04
PREB-201ENST00000260643 NECAB1Q8N987 351 aa27.76■■■□□ 2.03
PREB-201ENST00000260643 SCAND2PQ9GZW5 306 aaPredicted RBP27.76■■■□□ 2.03
PREB-201ENST00000260643 ANKRD7Q92527 254 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms