RNA–Protein interactions for RNA: ENST00000258362.7

PNKD-202, Transcript of PNKD, MBL domain containing, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PNKD, Length 2,991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-202ENST00000258362 BRD1O95696 1058 aa19.96■□□□□ 0.79
PNKD-202ENST00000258362 MSNP26038 577 aaKnown RBP19.96■□□□□ 0.79
PNKD-202ENST00000258362 PXDNQ92626 1479 aa19.96■□□□□ 0.79
PNKD-202ENST00000258362 HSPA4P34932 840 aa19.95■□□□□ 0.78
PNKD-202ENST00000258362 SLFNL1Q499Z3 407 aa19.95■□□□□ 0.78
PNKD-202ENST00000258362 RUFY3Q7L099 469 aa19.95■□□□□ 0.78
PNKD-202ENST00000258362 PROSER2Q86WR7 435 aaPredicted RBP19.95■□□□□ 0.78
PNKD-202ENST00000258362 MYD88Q99836 296 aa19.95■□□□□ 0.78
PNKD-202ENST00000258362 EAF2Q96CJ1 260 aaPredicted RBP19.95■□□□□ 0.78
PNKD-202ENST00000258362 POLA2Q14181 598 aa19.95■□□□□ 0.78
PNKD-202ENST00000258362 ZNF830Q96NB3 372 aaPredicted RBP19.95■□□□□ 0.78
PNKD-202ENST00000258362 TOPAZ1Q8N9V7 1692 aa19.94■□□□□ 0.78
PNKD-202ENST00000258362 KRT28Q7Z3Y7 464 aa19.94■□□□□ 0.78
PNKD-202ENST00000258362 LSG1Q9H089 658 aaKnown RBP19.94■□□□□ 0.78
PNKD-202ENST00000258362 PTMSP20962 102 aa19.94■□□□□ 0.78
PNKD-202ENST00000258362 CCDC173Q0VFZ6 552 aa19.94■□□□□ 0.78
PNKD-202ENST00000258362 PTMAP06454 111 aaKnown RBP19.93■□□□□ 0.78
PNKD-202ENST00000258362 EPHA10Q5JZY3 1008 aa19.93■□□□□ 0.78
PNKD-202ENST00000258362 COPS6Q7L5N1 327 aa19.93■□□□□ 0.78
PNKD-202ENST00000258362 XAGE3Q8WTP9 111 aa19.93■□□□□ 0.78
PNKD-202ENST00000258362 SMC3Q9UQE7 1217 aa19.93■□□□□ 0.78
PNKD-202ENST00000258362 NWD1Q149M9 1564 aa19.92■□□□□ 0.78
PNKD-202ENST00000258362 G3BP1Q13283 466 aaKnown RBP eCLIP19.92■□□□□ 0.78
PNKD-202ENST00000258362 FSD1Q9BTV5 496 aa19.92■□□□□ 0.78
PNKD-202ENST00000258362 USP16Q9Y5T5 823 aa19.92■□□□□ 0.78
PNKD-202ENST00000258362 RAD50Q92878 1312 aa19.92■□□□□ 0.78
PNKD-202ENST00000258362 RAB11FIP3O75154 756 aa19.92■□□□□ 0.78
PNKD-202ENST00000258362 KSR2Q6VAB6 950 aa19.92■□□□□ 0.78
PNKD-202ENST00000258362 CCDC85AQ96PX6 553 aaPredicted RBP19.92■□□□□ 0.78
PNKD-202ENST00000258362 DNAJC2Q99543 621 aaKnown RBP19.92■□□□□ 0.78
PNKD-202ENST00000258362 ECHDC1Q9NTX5 307 aa19.92■□□□□ 0.78
PNKD-202ENST00000258362 SASH1O94885 1247 aa19.91■□□□□ 0.78
PNKD-202ENST00000258362 SYT1P21579 422 aa19.91■□□□□ 0.78
PNKD-202ENST00000258362 CLEC17AQ6ZS10 378 aa19.91■□□□□ 0.78
PNKD-202ENST00000258362 ARHGEF25Q86VW2 580 aa19.91■□□□□ 0.78
PNKD-202ENST00000258362 KCNH5Q8NCM2 988 aa19.91■□□□□ 0.78
PNKD-202ENST00000258362 RAPGEF4Q8WZA2 1011 aa19.91■□□□□ 0.78
PNKD-202ENST00000258362 KAZALD1Q96I82 304 aa19.91■□□□□ 0.78
PNKD-202ENST00000258362 FMN2Q9NZ56 1722 aa19.91■□□□□ 0.78
PNKD-202ENST00000258362 ZNF445P59923 1031 aa19.91■□□□□ 0.78
PNKD-202ENST00000258362 NMIQ13287 307 aaPredicted RBP19.91■□□□□ 0.78
PNKD-202ENST00000258362 LRRC2Q9BYS8 371 aa19.91■□□□□ 0.78
PNKD-202ENST00000258362 GRM8O00222 908 aa19.9■□□□□ 0.78
PNKD-202ENST00000258362 GLRX3O76003 335 aaKnown RBP19.9■□□□□ 0.78
PNKD-202ENST00000258362 CCDC129Q6ZRS4 1044 aa19.9■□□□□ 0.78
PNKD-202ENST00000258362 NALCNQ8IZF0 1738 aa19.9■□□□□ 0.78
PNKD-202ENST00000258362 CUL4AQ13619 759 aa19.9■□□□□ 0.78
PNKD-202ENST00000258362 ZNF496Q96IT1 587 aaPredicted RBP19.9■□□□□ 0.78
PNKD-202ENST00000258362 CEMIPQ8WUJ3 1361 aa19.9■□□□□ 0.78
PNKD-202ENST00000258362 A0A0D9SFI3 127 aa19.89■□□□□ 0.78
PNKD-202ENST00000258362 GJB2P29033 226 aa19.89■□□□□ 0.78
PNKD-202ENST00000258362 DNM1Q05193 864 aaKnown RBP19.89■□□□□ 0.78
PNKD-202ENST00000258362 UBE3BQ7Z3V4 1068 aa19.89■□□□□ 0.78
PNKD-202ENST00000258362 PDRG1Q9NUG6 133 aa19.89■□□□□ 0.78
PNKD-202ENST00000258362 LRSAM1Q6UWE0 723 aa19.89■□□□□ 0.77
PNKD-202ENST00000258362 R3HCC1Q9Y3T6 440 aaKnown RBP19.89■□□□□ 0.77
PNKD-202ENST00000258362 IGKV5-2P06315 115 aa19.89■□□□□ 0.77
PNKD-202ENST00000258362 RBM10P98175 930 aaKnown RBP19.89■□□□□ 0.77
PNKD-202ENST00000258362 SEC62Q99442 399 aaKnown RBP19.89■□□□□ 0.77
PNKD-202ENST00000258362 NAP1L2Q9ULW6 460 aaPredicted RBP19.89■□□□□ 0.77
PNKD-202ENST00000258362 ISY1Q9ULR0 285 aaKnown RBP19.88■□□□□ 0.77
PNKD-202ENST00000258362 RBM8AQ9Y5S9 174 aaKnown RBP19.88■□□□□ 0.77
PNKD-202ENST00000258362 MCM2P49736 904 aa19.88■□□□□ 0.77
PNKD-202ENST00000258362 GIMAP6Q6P9H5 292 aa19.88■□□□□ 0.77
PNKD-202ENST00000258362 HCLS1P14317 486 aaPredicted RBP19.87■□□□□ 0.77
PNKD-202ENST00000258362 C17orf53Q8N3J3 647 aaPredicted RBP19.87■□□□□ 0.77
PNKD-202ENST00000258362 USP25Q9UHP3 1055 aa19.87■□□□□ 0.77
PNKD-202ENST00000258362 STX6O43752 255 aa19.87■□□□□ 0.77
PNKD-202ENST00000258362 ANAPC15P60006 121 aa19.87■□□□□ 0.77
PNKD-202ENST00000258362 ZNF589Q86UQ0 364 aaPredicted RBP19.87■□□□□ 0.77
PNKD-202ENST00000258362 ZSCAN30Q86W11 494 aa19.87■□□□□ 0.77
PNKD-202ENST00000258362 LIMCH1Q9UPQ0 1083 aa19.87■□□□□ 0.77
PNKD-202ENST00000258362 CAMK4Q16566 473 aa19.86■□□□□ 0.77
PNKD-202ENST00000258362 ME3Q16798 604 aa19.86■□□□□ 0.77
PNKD-202ENST00000258362 ZNF790Q6PG37 636 aa19.86■□□□□ 0.77
PNKD-202ENST00000258362 TFIP11Q9UBB9 837 aaKnown RBP19.86■□□□□ 0.77
PNKD-202ENST00000258362 ARHGAP23Q9P227 1491 aa19.85■□□□□ 0.77
PNKD-202ENST00000258362 WDR33Q9C0J8 1336 aaKnown RBP19.85■□□□□ 0.77
PNKD-202ENST00000258362 RGPD2P0DJD1 1756 aa19.85■□□□□ 0.77
PNKD-202ENST00000258362 DDX46Q7L014 1031 aaKnown RBP19.85■□□□□ 0.77
PNKD-202ENST00000258362 CEBPZQ03701 1054 aaKnown RBP19.84■□□□□ 0.77
PNKD-202ENST00000258362 AMOTQ4VCS5 1084 aa19.84■□□□□ 0.77
PNKD-202ENST00000258362 DDX11Q96FC9 970 aa19.84■□□□□ 0.77
PNKD-202ENST00000258362 GPATCH3Q96I76 525 aa19.84■□□□□ 0.77
PNKD-202ENST00000258362 NEUROD6Q96NK8 337 aa19.84■□□□□ 0.77
PNKD-202ENST00000258362 TSPY26PQ9H489 355 aa19.84■□□□□ 0.77
PNKD-202ENST00000258362 RPAP1Q9BWH6 1393 aaPredicted RBP19.84■□□□□ 0.77
PNKD-202ENST00000258362 HSP90AB4PQ58FF6 505 aa19.84■□□□□ 0.77
PNKD-202ENST00000258362 CYP46A1Q9Y6A2 500 aa19.84■□□□□ 0.77
PNKD-202ENST00000258362 NEXNQ0ZGT2 675 aa19.83■□□□□ 0.77
PNKD-202ENST00000258362 TTC14Q96N46 770 aa19.83■□□□□ 0.77
PNKD-202ENST00000258362 PPP1R9BQ96SB3 815 aa19.83■□□□□ 0.77
PNKD-202ENST00000258362 HYPKQ9NX55 129 aa19.83■□□□□ 0.77
PNKD-202ENST00000258362 TPCN1Q9ULQ1 816 aa19.83■□□□□ 0.77
PNKD-202ENST00000258362 ZSCAN22P10073 491 aaPredicted RBP19.83■□□□□ 0.77
PNKD-202ENST00000258362 PDIA6Q15084 440 aa19.83■□□□□ 0.77
PNKD-202ENST00000258362 TTC5Q8N0Z6 440 aa19.83■□□□□ 0.77
PNKD-202ENST00000258362 LINS1Q8NG48 757 aa19.83■□□□□ 0.77
PNKD-202ENST00000258362 SLIT1O75093 1534 aa19.83■□□□□ 0.76
PNKD-202ENST00000258362 TCHHQ07283 1943 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms