RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 RABEP1Q15276 862 aa15.87■□□□□ 0.13
PRPF38A-201ENST00000257181 TXLNBQ8N3L3 684 aa15.87■□□□□ 0.13
PRPF38A-201ENST00000257181 PNMA2Q9UL42 364 aa15.87■□□□□ 0.13
PRPF38A-201ENST00000257181 MAP3K2Q9Y2U5 619 aa15.87■□□□□ 0.13
PRPF38A-201ENST00000257181 NAPBQ9H115 298 aa15.87■□□□□ 0.13
PRPF38A-201ENST00000257181 ZBTB3Q9H5J0 574 aa15.87■□□□□ 0.13
PRPF38A-201ENST00000257181 KRT18P05783 430 aaKnown RBP15.87■□□□□ 0.13
PRPF38A-201ENST00000257181 EPS15P42566 896 aa15.87■□□□□ 0.13
PRPF38A-201ENST00000257181 NAT10Q9H0A0 1025 aaKnown RBP15.87■□□□□ 0.13
PRPF38A-201ENST00000257181 SIL1Q9H173 461 aa15.87■□□□□ 0.13
PRPF38A-201ENST00000257181 CCDC70Q6NSX1 233 aa15.86■□□□□ 0.13
PRPF38A-201ENST00000257181 TSR2Q969E8 191 aaKnown RBP15.86■□□□□ 0.13
PRPF38A-201ENST00000257181 DACH1Q9UI36 760 aa15.86■□□□□ 0.13
PRPF38A-201ENST00000257181 BECN2A8MW95 431 aa15.85■□□□□ 0.13
PRPF38A-201ENST00000257181 STIM1Q13586 685 aa15.85■□□□□ 0.13
PRPF38A-201ENST00000257181 CTCFLQ8NI51 663 aaPredicted RBP15.85■□□□□ 0.13
PRPF38A-201ENST00000257181 MAP3K4Q9Y6R4 1608 aa15.85■□□□□ 0.13
PRPF38A-201ENST00000257181 DISP3Q9P2K9 1392 aa15.85■□□□□ 0.13
PRPF38A-201ENST00000257181 LTKP29376 864 aa15.85■□□□□ 0.13
PRPF38A-201ENST00000257181 TCIRG1Q13488 830 aa15.85■□□□□ 0.13
PRPF38A-201ENST00000257181 OLFM4Q6UX06 510 aa15.85■□□□□ 0.13
PRPF38A-201ENST00000257181 A0A1W2PP64 1363 aa15.84■□□□□ 0.13
PRPF38A-201ENST00000257181 ARHGEF40Q8TER5 1519 aa15.84■□□□□ 0.13
PRPF38A-201ENST00000257181 KIF1BO60333 1816 aa15.84■□□□□ 0.13
PRPF38A-201ENST00000257181 LETM1O95202 739 aaPredicted RBP15.84■□□□□ 0.13
PRPF38A-201ENST00000257181 GPR162Q16538 588 aa15.84■□□□□ 0.13
PRPF38A-201ENST00000257181 ORAI2Q96SN7 254 aa15.84■□□□□ 0.13
PRPF38A-201ENST00000257181 LRRFIP2Q9Y608 721 aaKnown RBP15.84■□□□□ 0.13
PRPF38A-201ENST00000257181 LNPKQ9C0E8 428 aa15.84■□□□□ 0.13
PRPF38A-201ENST00000257181 RBM27Q9P2N5 1060 aaKnown RBP15.84■□□□□ 0.13
PRPF38A-201ENST00000257181 NIM1KQ8IY84 436 aa15.84■□□□□ 0.13
PRPF38A-201ENST00000257181 GNAQP50148 359 aa15.83■□□□□ 0.13
PRPF38A-201ENST00000257181 CABLES1Q8TDN4 633 aa15.83■□□□□ 0.13
PRPF38A-201ENST00000257181 SLKQ9H2G2 1235 aaPredicted RBP15.83■□□□□ 0.13
PRPF38A-201ENST00000257181 ADGRB3O60242 1522 aa15.83■□□□□ 0.13
PRPF38A-201ENST00000257181 GPTP24298 496 aa15.83■□□□□ 0.12
PRPF38A-201ENST00000257181 PTPRTO14522 1441 aa15.83■□□□□ 0.12
PRPF38A-201ENST00000257181 ADGRL3Q9HAR2 1447 aa15.83■□□□□ 0.12
PRPF38A-201ENST00000257181 TNFAIP1Q13829 316 aa15.83■□□□□ 0.12
PRPF38A-201ENST00000257181 LINS1Q8NG48 757 aa15.83■□□□□ 0.12
PRPF38A-201ENST00000257181 TNPO1Q92973 898 aaKnown RBP15.83■□□□□ 0.12
PRPF38A-201ENST00000257181 HSP90AB2PQ58FF8 381 aa15.82■□□□□ 0.12
PRPF38A-201ENST00000257181 PYM1Q9BRP8 204 aaKnown RBP15.82■□□□□ 0.12
PRPF38A-201ENST00000257181 ZC3H13Q5T200 1668 aaKnown RBP15.82■□□□□ 0.12
PRPF38A-201ENST00000257181 KIF20AO95235 890 aa15.82■□□□□ 0.12
PRPF38A-201ENST00000257181 TBC1D22AQ8WUA7 517 aa15.82■□□□□ 0.12
PRPF38A-201ENST00000257181 PRM3Q9NNZ6 103 aa15.82■□□□□ 0.12
PRPF38A-201ENST00000257181 DENND2AQ9ULE3 1009 aa15.82■□□□□ 0.12
PRPF38A-201ENST00000257181 MSNP26038 577 aaKnown RBP15.82■□□□□ 0.12
PRPF38A-201ENST00000257181 TMTC2Q8N394 836 aa15.82■□□□□ 0.12
PRPF38A-201ENST00000257181 MAP3K19Q56UN5 1328 aa15.82■□□□□ 0.12
PRPF38A-201ENST00000257181 BAG4O95429 457 aaKnown RBP15.81■□□□□ 0.12
PRPF38A-201ENST00000257181 PLBD2Q8NHP8 589 aa15.81■□□□□ 0.12
PRPF38A-201ENST00000257181 PES1O00541 588 aaKnown RBP15.81■□□□□ 0.12
PRPF38A-201ENST00000257181 NOL8Q76FK4 1167 aaKnown RBP15.81■□□□□ 0.12
PRPF38A-201ENST00000257181 EVI5LQ96CN4 794 aa15.81■□□□□ 0.12
PRPF38A-201ENST00000257181 SLC52A2Q9HAB3 445 aa15.81■□□□□ 0.12
PRPF38A-201ENST00000257181 POLKQ9UBT6 870 aa15.81■□□□□ 0.12
PRPF38A-201ENST00000257181 OTUD7BQ6GQQ9 843 aa15.81■□□□□ 0.12
PRPF38A-201ENST00000257181 PANK1Q8TE04 598 aa15.81■□□□□ 0.12
PRPF38A-201ENST00000257181 CNNM2Q9H8M5 875 aa15.81■□□□□ 0.12
PRPF38A-201ENST00000257181 CCDC125Q86Z20 511 aa15.81■□□□□ 0.12
PRPF38A-201ENST00000257181 EXOC6Q8TAG9 804 aa15.81■□□□□ 0.12
PRPF38A-201ENST00000257181 SH3TC1Q8TE82 1336 aa15.8■□□□□ 0.12
PRPF38A-201ENST00000257181 CCDC191Q8NCU4 936 aa15.8■□□□□ 0.12
PRPF38A-201ENST00000257181 PCMTD1Q96MG8 357 aaPredicted RBP15.8■□□□□ 0.12
PRPF38A-201ENST00000257181 FANCIQ9NVI1 1328 aa15.8■□□□□ 0.12
PRPF38A-201ENST00000257181 INSRP06213 1382 aa15.8■□□□□ 0.12
PRPF38A-201ENST00000257181 ODF2Q5BJF6 829 aa15.8■□□□□ 0.12
PRPF38A-201ENST00000257181 BLOC1S2Q6QNY1 142 aa15.8■□□□□ 0.12
PRPF38A-201ENST00000257181 FAM13BQ9NYF5 915 aa15.8■□□□□ 0.12
PRPF38A-201ENST00000257181 GGA1Q9UJY5 639 aa15.8■□□□□ 0.12
PRPF38A-201ENST00000257181 TMEM87AQ8NBN3 555 aa15.8■□□□□ 0.12
PRPF38A-201ENST00000257181 SLC5A4Q9NY91 659 aa15.8■□□□□ 0.12
PRPF38A-201ENST00000257181 KIF22Q14807 665 aa15.8■□□□□ 0.12
PRPF38A-201ENST00000257181 NAP1L4Q99733 375 aaKnown RBP15.8■□□□□ 0.12
PRPF38A-201ENST00000257181 DDX21Q9NR30 783 aaKnown RBP eCLIP15.8■□□□□ 0.12
PRPF38A-201ENST00000257181 AATKQ6ZMQ8 1374 aa15.79■□□□□ 0.12
PRPF38A-201ENST00000257181 H7C1D1 291 aa15.79■□□□□ 0.12
PRPF38A-201ENST00000257181 BICD2Q8TD16 824 aa15.79■□□□□ 0.12
PRPF38A-201ENST00000257181 XAGE3Q8WTP9 111 aa15.79■□□□□ 0.12
PRPF38A-201ENST00000257181 CHMP5Q9NZZ3 219 aa15.79■□□□□ 0.12
PRPF38A-201ENST00000257181 CDC42BPGQ6DT37 1551 aa15.79■□□□□ 0.12
PRPF38A-201ENST00000257181 PABPC4Q13310 644 aaKnown RBP eCLIP15.79■□□□□ 0.123e-7■■■■□ 25
PRPF38A-201ENST00000257181 NBR1Q14596 966 aa15.79■□□□□ 0.12
PRPF38A-201ENST00000257181 BRDTQ58F21 947 aaPredicted RBP15.79■□□□□ 0.12
PRPF38A-201ENST00000257181 APBB1IPQ7Z5R6 666 aaPredicted RBP15.79■□□□□ 0.12
PRPF38A-201ENST00000257181 CATIPQ7Z7H3 387 aa15.79■□□□□ 0.12
PRPF38A-201ENST00000257181 C22orf23Q9BZE7 217 aa15.79■□□□□ 0.12
PRPF38A-201ENST00000257181 LRRC27Q9C0I9 530 aa15.79■□□□□ 0.12
PRPF38A-201ENST00000257181 OVOS2A0A0G2JMS6 1433 aa15.79■□□□□ 0.12
PRPF38A-201ENST00000257181 OVOS2A0A0J9YW53 1432 aa15.79■□□□□ 0.12
PRPF38A-201ENST00000257181 OVOS2Q6IE36 1432 aa15.79■□□□□ 0.12
PRPF38A-201ENST00000257181 SLC4A3P48751 1232 aa15.79■□□□□ 0.12
PRPF38A-201ENST00000257181 CCDC96Q2M329 555 aa15.79■□□□□ 0.12
PRPF38A-201ENST00000257181 TTC6Q86TZ1 520 aa15.79■□□□□ 0.12
PRPF38A-201ENST00000257181 KRT23Q9C075 422 aa15.79■□□□□ 0.12
PRPF38A-201ENST00000257181 LMTK2Q8IWU2 1503 aa15.78■□□□□ 0.12
PRPF38A-201ENST00000257181 EYA1Q99502 592 aa15.78■□□□□ 0.12
PRPF38A-201ENST00000257181 MAGEC2Q9UBF1 373 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms