RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 RFC4P35249 363 aa17.69■□□□□ 0.42
UBE4B-201ENST00000253251 SPTY2D1Q68D10 685 aaPredicted RBP17.69■□□□□ 0.42
UBE4B-201ENST00000253251 DCTPP1Q9H773 170 aa17.69■□□□□ 0.42
UBE4B-201ENST00000253251 STK3Q13188 491 aa17.69■□□□□ 0.42
UBE4B-201ENST00000253251 RTL1A6NKG5 1358 aa17.69■□□□□ 0.42
UBE4B-201ENST00000253251 METP08581 1390 aa17.69■□□□□ 0.42
UBE4B-201ENST00000253251 KIAA0232Q92628 1395 aa17.69■□□□□ 0.42
UBE4B-201ENST00000253251 TBC1D9Q6ZT07 1266 aa17.69■□□□□ 0.42
UBE4B-201ENST00000253251 ZBTB40Q9NUA8 1239 aa17.69■□□□□ 0.42
UBE4B-201ENST00000253251 SLAIN2Q9P270 581 aa17.69■□□□□ 0.42
UBE4B-201ENST00000253251 ATP6V1AP38606 617 aa17.68■□□□□ 0.42
UBE4B-201ENST00000253251 HMGN5P82970 282 aaKnown RBP17.68■□□□□ 0.42
UBE4B-201ENST00000253251 ANXA1P04083 346 aa17.68■□□□□ 0.42
UBE4B-201ENST00000253251 CAVIN1Q6NZI2 390 aaKnown RBP17.68■□□□□ 0.42
UBE4B-201ENST00000253251 DZIP1Q86YF9 867 aaKnown RBP17.68■□□□□ 0.42
UBE4B-201ENST00000253251 TSPY26PQ9H489 355 aa17.68■□□□□ 0.42
UBE4B-201ENST00000253251 TSPYL6Q8N831 410 aa17.68■□□□□ 0.42
UBE4B-201ENST00000253251 PCMTD1Q96MG8 357 aaPredicted RBP17.68■□□□□ 0.42
UBE4B-201ENST00000253251 KIF24Q5T7B8 1368 aa17.68■□□□□ 0.42
UBE4B-201ENST00000253251 TTC41PQ6P2S7 1318 aa17.68■□□□□ 0.42
UBE4B-201ENST00000253251 NASPP49321 788 aaPredicted RBP17.67■□□□□ 0.42
UBE4B-201ENST00000253251 NUP133Q8WUM0 1156 aa17.67■□□□□ 0.42
UBE4B-201ENST00000253251 NYXQ9GZU5 481 aa17.67■□□□□ 0.42
UBE4B-201ENST00000253251 RBM5P52756 815 aaKnown RBP eCLIP17.67■□□□□ 0.42
UBE4B-201ENST00000253251 LIMCH1Q9UPQ0 1083 aa17.67■□□□□ 0.42
UBE4B-201ENST00000253251 ZNF213O14771 459 aa17.67■□□□□ 0.42
UBE4B-201ENST00000253251 SMC5Q8IY18 1101 aa17.67■□□□□ 0.42
UBE4B-201ENST00000253251 FAM13BQ9NYF5 915 aa17.67■□□□□ 0.42
UBE4B-201ENST00000253251 TRIM35Q9UPQ4 493 aa17.67■□□□□ 0.42
UBE4B-201ENST00000253251 MTMR7Q9Y216 660 aa17.67■□□□□ 0.42
UBE4B-201ENST00000253251 CDK5RAP3Q96JB5 506 aa17.67■□□□□ 0.42
UBE4B-201ENST00000253251 PDE1AP54750 535 aa17.66■□□□□ 0.42
UBE4B-201ENST00000253251 ST5P78524 1137 aa17.66■□□□□ 0.42
UBE4B-201ENST00000253251 DACH1Q9UI36 760 aa17.66■□□□□ 0.42
UBE4B-201ENST00000253251 USP5P45974 858 aa17.66■□□□□ 0.42
UBE4B-201ENST00000253251 ANAPC15P60006 121 aa17.65■□□□□ 0.42
UBE4B-201ENST00000253251 NBPF6Q5VWK0 638 aa17.65■□□□□ 0.42
UBE4B-201ENST00000253251 ZNF790Q6PG37 636 aa17.65■□□□□ 0.42
UBE4B-201ENST00000253251 NBPF5PQ86XG9 351 aaPredicted RBP17.65■□□□□ 0.42
UBE4B-201ENST00000253251 NBPF4Q96M43 638 aa17.65■□□□□ 0.42
UBE4B-201ENST00000253251 CCDC192P0DO97 292 aa17.65■□□□□ 0.42
UBE4B-201ENST00000253251 MCM4P33991 863 aa17.65■□□□□ 0.42
UBE4B-201ENST00000253251 CEP85Q6P2H3 762 aa17.65■□□□□ 0.42
UBE4B-201ENST00000253251 BTG4Q9NY30 223 aa17.65■□□□□ 0.42
UBE4B-201ENST00000253251 CCDC39Q9UFE4 941 aa17.65■□□□□ 0.42
UBE4B-201ENST00000253251 IQCA1Q86XH1 822 aa17.65■□□□□ 0.42
UBE4B-201ENST00000253251 CEP131Q9UPN4 1083 aa17.64■□□□□ 0.42
UBE4B-201ENST00000253251 CROCC2H7BZ55 1655 aa17.64■□□□□ 0.42
UBE4B-201ENST00000253251 ME1P48163 572 aa17.64■□□□□ 0.41
UBE4B-201ENST00000253251 TBC1D32Q96NH3 1257 aa17.64■□□□□ 0.41
UBE4B-201ENST00000253251 C8orf37Q96NL8 207 aa17.64■□□□□ 0.41
UBE4B-201ENST00000253251 SETDB2Q96T68 719 aa17.64■□□□□ 0.41
UBE4B-201ENST00000253251 UTP14AQ9BVJ6 771 aaKnown RBP17.64■□□□□ 0.41
UBE4B-201ENST00000253251 TSPOAP1O95153 1857 aa17.64■□□□□ 0.41
UBE4B-201ENST00000253251 ATP2B1P20020 1258 aa17.64■□□□□ 0.41
UBE4B-201ENST00000253251 LMBR1LQ6UX01 489 aa17.64■□□□□ 0.41
UBE4B-201ENST00000253251 NOC3LQ8WTT2 800 aaKnown RBP17.64■□□□□ 0.41
UBE4B-201ENST00000253251 ANKRD18AQ8IVF6 992 aa17.64■□□□□ 0.41
UBE4B-201ENST00000253251 SPATA32Q96LK8 384 aa17.64■□□□□ 0.41
UBE4B-201ENST00000253251 CCDC70Q6NSX1 233 aa17.63■□□□□ 0.41
UBE4B-201ENST00000253251 NLRP3Q96P20 1036 aa17.63■□□□□ 0.41
UBE4B-201ENST00000253251 GOLIM4O00461 696 aa17.63■□□□□ 0.41
UBE4B-201ENST00000253251 ATP2B2Q01814 1243 aa17.63■□□□□ 0.41
UBE4B-201ENST00000253251 ATP2B3Q16720 1220 aa17.63■□□□□ 0.41
UBE4B-201ENST00000253251 ZSCAN29Q8IWY8 852 aaPredicted RBP17.63■□□□□ 0.41
UBE4B-201ENST00000253251 POLR3DP05423 398 aaPredicted RBP17.63■□□□□ 0.41
UBE4B-201ENST00000253251 DZIP3Q86Y13 1208 aaKnown RBP17.63■□□□□ 0.41
UBE4B-201ENST00000253251 ZGPATQ8N5A5 531 aaKnown RBP17.63■□□□□ 0.41
UBE4B-201ENST00000253251 BAG3O95817 575 aa17.63■□□□□ 0.41
UBE4B-201ENST00000253251 SLC52A2Q9HAB3 445 aa17.63■□□□□ 0.41
UBE4B-201ENST00000253251 SPINK5Q9NQ38 1064 aaPredicted RBP17.62■□□□□ 0.41
UBE4B-201ENST00000253251 PPP1R1BQ9UD71 204 aaPredicted RBP17.62■□□□□ 0.41
UBE4B-201ENST00000253251 UPF3BQ9BZI7 483 aaKnown RBP17.62■□□□□ 0.41
UBE4B-201ENST00000253251 LMTK2Q8IWU2 1503 aa17.62■□□□□ 0.41
UBE4B-201ENST00000253251 GSTO1P78417 241 aa17.62■□□□□ 0.41
UBE4B-201ENST00000253251 FILIP1LQ4L180 1135 aa17.62■□□□□ 0.41
UBE4B-201ENST00000253251 PLBD2Q8NHP8 589 aa17.62■□□□□ 0.41
UBE4B-201ENST00000253251 SCAND2PQ9GZW5 306 aaPredicted RBP17.62■□□□□ 0.41
UBE4B-201ENST00000253251 SAMD1Q6SPF0 538 aaPredicted RBP17.62■□□□□ 0.41
UBE4B-201ENST00000253251 MKNK2Q9HBH9 465 aa17.62■□□□□ 0.41
UBE4B-201ENST00000253251 MAP3K4Q9Y6R4 1608 aa17.61■□□□□ 0.41
UBE4B-201ENST00000253251 SDSP20132 328 aa17.61■□□□□ 0.41
UBE4B-201ENST00000253251 TNMDQ9H2S6 317 aa17.61■□□□□ 0.41
UBE4B-201ENST00000253251 RLBP1P12271 317 aa17.61■□□□□ 0.41
UBE4B-201ENST00000253251 CTCFLQ8NI51 663 aaPredicted RBP17.61■□□□□ 0.41
UBE4B-201ENST00000253251 ANKARQ7Z5J8 1434 aa17.61■□□□□ 0.41
UBE4B-201ENST00000253251 ZBTB7BO15156 539 aaPredicted RBP17.6■□□□□ 0.41
UBE4B-201ENST00000253251 PARP10Q53GL7 1025 aa17.6■□□□□ 0.41
UBE4B-201ENST00000253251 ERVV-2B6SEH9 535 aa17.6■□□□□ 0.41
UBE4B-201ENST00000253251 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.6■□□□□ 0.413e-7■■■■□ 19.7
UBE4B-201ENST00000253251 USP6P35125 1406 aa17.6■□□□□ 0.41
UBE4B-201ENST00000253251 TMEM94Q12767 1356 aa17.59■□□□□ 0.41
UBE4B-201ENST00000253251 MINDY4BA8MYZ0 360 aa17.59■□□□□ 0.41
UBE4B-201ENST00000253251 STIM1Q13586 685 aa17.59■□□□□ 0.41
UBE4B-201ENST00000253251 TPTE2Q6XPS3 522 aa17.59■□□□□ 0.41
UBE4B-201ENST00000253251 CCDC83Q8IWF9 413 aa17.59■□□□□ 0.41
UBE4B-201ENST00000253251 PHAXQ9H814 394 aaKnown RBP17.59■□□□□ 0.41
UBE4B-201ENST00000253251 RNF17Q9BXT8 1623 aaKnown RBP17.59■□□□□ 0.41
UBE4B-201ENST00000253251 ROBO2Q9HCK4 1378 aa17.59■□□□□ 0.41
UBE4B-201ENST00000253251 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms