RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 MAP3K15Q6ZN16 1313 aa32.57■■■□□ 2.8
LSM7-201ENST00000252622 TTLL7Q6ZT98 887 aa32.57■■■□□ 2.8
LSM7-201ENST00000252622 GRIN3BO60391 1043 aa32.56■■■□□ 2.8
LSM7-201ENST00000252622 DPEP1P16444 411 aa32.56■■■□□ 2.8
LSM7-201ENST00000252622 PROSER3Q2NL68 480 aa32.56■■■□□ 2.8
LSM7-201ENST00000252622 HDGFL1Q5TGJ6 251 aa32.56■■■□□ 2.8
LSM7-201ENST00000252622 A0A0G2JLW4 131 aa32.55■■■□□ 2.8
LSM7-201ENST00000252622 NECTIN2Q92692 538 aa32.55■■■□□ 2.8
LSM7-201ENST00000252622 DDX21Q9NR30 783 aaKnown RBP eCLIP32.55■■■□□ 2.8
LSM7-201ENST00000252622 HLFQ16534 295 aa32.54■■■□□ 2.8
LSM7-201ENST00000252622 WDR63Q8IWG1 891 aa32.53■■■□□ 2.8
LSM7-201ENST00000252622 ATP10DQ9P241 1426 aa32.52■■■□□ 2.8
LSM7-201ENST00000252622 ANXA1P04083 346 aa32.52■■■□□ 2.8
LSM7-201ENST00000252622 PRR5LQ6MZQ0 368 aa32.52■■■□□ 2.8
LSM7-201ENST00000252622 NIP7Q9Y221 180 aaKnown RBP eCLIP32.52■■■□□ 2.8
LSM7-201ENST00000252622 GOLGB1Q14789 3259 aaKnown RBP32.52■■■□□ 2.8
LSM7-201ENST00000252622 BRCA1P38398 1863 aaKnown RBP32.52■■■□□ 2.8
LSM7-201ENST00000252622 UTRNP46939 3433 aa32.52■■■□□ 2.8
LSM7-201ENST00000252622 KCNA3P22001 575 aa32.51■■■□□ 2.79
LSM7-201ENST00000252622 CNBD1Q8NA66 436 aa32.51■■■□□ 2.79
LSM7-201ENST00000252622 CHPF2Q9P2E5 772 aa32.51■■■□□ 2.79
LSM7-201ENST00000252622 TSR2Q969E8 191 aaKnown RBP32.5■■■□□ 2.79
LSM7-201ENST00000252622 ZBTB3Q9H5J0 574 aa32.5■■■□□ 2.79
LSM7-201ENST00000252622 DBF4Q9UBU7 674 aaPredicted RBP32.5■■■□□ 2.79
LSM7-201ENST00000252622 SALL2Q9Y467 1007 aaPredicted RBP32.5■■■□□ 2.79
LSM7-201ENST00000252622 NUP98P52948 1817 aa32.49■■■□□ 2.79
LSM7-201ENST00000252622 C8orf58Q8NAV2 365 aa32.49■■■□□ 2.79
LSM7-201ENST00000252622 WWC3Q9ULE0 1092 aa32.49■■■□□ 2.79
LSM7-201ENST00000252622 NBPF5PQ86XG9 351 aaPredicted RBP32.48■■■□□ 2.79
LSM7-201ENST00000252622 CHRNA5P30532 468 aa32.47■■■□□ 2.79
LSM7-201ENST00000252622 DIEXFQ68CQ4 756 aaKnown RBP32.47■■■□□ 2.79
LSM7-201ENST00000252622 GIGYF2Q6Y7W6 1299 aaKnown RBP32.47■■■□□ 2.79
LSM7-201ENST00000252622 COPS6Q7L5N1 327 aa32.47■■■□□ 2.79
LSM7-201ENST00000252622 XAGE3Q8WTP9 111 aa32.47■■■□□ 2.79
LSM7-201ENST00000252622 BRIP1Q9BX63 1249 aa32.47■■■□□ 2.79
LSM7-201ENST00000252622 PIM2Q9P1W9 311 aa32.47■■■□□ 2.79
LSM7-201ENST00000252622 ANKRD31Q8N7Z5 1873 aa32.46■■■□□ 2.79
LSM7-201ENST00000252622 ST5P78524 1137 aa32.46■■■□□ 2.79
LSM7-201ENST00000252622 CHMP4AQ9BY43 222 aa32.46■■■□□ 2.79
LSM7-201ENST00000252622 CHD4Q14839 1912 aa32.45■■■□□ 2.79
LSM7-201ENST00000252622 ELL2O00472 640 aaPredicted RBP32.45■■■□□ 2.79
LSM7-201ENST00000252622 NPHP1O15259 732 aa32.45■■■□□ 2.79
LSM7-201ENST00000252622 PDZRN3Q9UPQ7 1066 aa32.45■■■□□ 2.79
LSM7-201ENST00000252622 DLEC1Q9Y238 1755 aa32.45■■■□□ 2.78
LSM7-201ENST00000252622 YY1P25490 414 aa32.44■■■□□ 2.78
LSM7-201ENST00000252622 HYPKQ9NX55 129 aa32.44■■■□□ 2.78
LSM7-201ENST00000252622 BCS1LQ9Y276 419 aa32.44■■■□□ 2.78
LSM7-201ENST00000252622 IBTKQ9P2D0 1353 aaPredicted RBP32.44■■■□□ 2.78
LSM7-201ENST00000252622 PDE6BP35913 854 aa32.43■■■□□ 2.78
LSM7-201ENST00000252622 TPTE2Q6XPS3 522 aa32.43■■■□□ 2.78
LSM7-201ENST00000252622 FANCIQ9NVI1 1328 aa32.43■■■□□ 2.78
LSM7-201ENST00000252622 AIMP1Q12904 312 aaKnown RBP32.42■■■□□ 2.78
LSM7-201ENST00000252622 DALRD3Q5D0E6 543 aaKnown RBP32.42■■■□□ 2.78
LSM7-201ENST00000252622 C2CD5Q86YS7 1000 aa32.42■■■□□ 2.78
LSM7-201ENST00000252622 ZNF34Q8IZ26 560 aa32.42■■■□□ 2.78
LSM7-201ENST00000252622 CCDC24Q8N4L8 307 aa32.42■■■□□ 2.78
LSM7-201ENST00000252622 TSPYL6Q8N831 410 aa32.42■■■□□ 2.78
LSM7-201ENST00000252622 H0YIN7 160 aa32.41■■■□□ 2.78
LSM7-201ENST00000252622 UBN2Q6ZU65 1347 aa32.41■■■□□ 2.78
LSM7-201ENST00000252622 NYXQ9GZU5 481 aa32.4■■■□□ 2.78
LSM7-201ENST00000252622 ZNF521Q96K83 1311 aa32.4■■■□□ 2.78
LSM7-201ENST00000252622 ARFGEF1Q9Y6D6 1849 aa32.4■■■□□ 2.78
LSM7-201ENST00000252622 HSP90AB3PQ58FF7 597 aa32.39■■■□□ 2.78
LSM7-201ENST00000252622 CCDC30Q5VVM6 783 aa32.39■■■□□ 2.78
LSM7-201ENST00000252622 COL11A2P13942 1736 aaPredicted RBP32.38■■■□□ 2.77
LSM7-201ENST00000252622 GPTP24298 496 aa32.38■■■□□ 2.77
LSM7-201ENST00000252622 FAM177BA6PVY3 158 aa32.37■■■□□ 2.77
LSM7-201ENST00000252622 TWISTNBQ3B726 338 aaPredicted RBP32.37■■■□□ 2.77
LSM7-201ENST00000252622 PARP10Q53GL7 1025 aa32.37■■■□□ 2.77
LSM7-201ENST00000252622 ANKRD36CQ5JPF3 1778 aa32.37■■■□□ 2.77
LSM7-201ENST00000252622 PLBD2Q8NHP8 589 aa32.36■■■□□ 2.77
LSM7-201ENST00000252622 MYH16Q9H6N6 1097 aa32.36■■■□□ 2.77
LSM7-201ENST00000252622 GOLGA2Q08379 1002 aa32.35■■■□□ 2.77
LSM7-201ENST00000252622 SPINK5Q9NQ38 1064 aaPredicted RBP32.35■■■□□ 2.77
LSM7-201ENST00000252622 RIC1Q4ADV7 1423 aa32.34■■■□□ 2.77
LSM7-201ENST00000252622 GTF2E1P29083 439 aaPredicted RBP32.34■■■□□ 2.77
LSM7-201ENST00000252622 TCIRG1Q13488 830 aa32.34■■■□□ 2.77
LSM7-201ENST00000252622 SUSD4Q5VX71 490 aa32.34■■■□□ 2.77
LSM7-201ENST00000252622 ANKRD13DQ6ZTN6 518 aa32.34■■■□□ 2.77
LSM7-201ENST00000252622 KLRG2A4D1S0 409 aaPredicted RBP32.33■■■□□ 2.77
LSM7-201ENST00000252622 TTLL6Q8N841 843 aa32.33■■■□□ 2.77
LSM7-201ENST00000252622 ABCC12Q96J65 1359 aa32.32■■■□□ 2.77
LSM7-201ENST00000252622 NTSR2O95665 410 aa32.32■■■□□ 2.76
LSM7-201ENST00000252622 PPP1R42Q7Z4L9 355 aa32.32■■■□□ 2.76
LSM7-201ENST00000252622 MIER1Q8N108 512 aa32.32■■■□□ 2.76
LSM7-201ENST00000252622 SRGNP10124 158 aa32.31■■■□□ 2.76
LSM7-201ENST00000252622 PHAXQ9H814 394 aaKnown RBP32.31■■■□□ 2.76
LSM7-201ENST00000252622 RNF123Q5XPI4 1314 aa32.3■■■□□ 2.76
LSM7-201ENST00000252622 STYK1Q6J9G0 422 aa32.3■■■□□ 2.76
LSM7-201ENST00000252622 NUTM1Q86Y26 1132 aa32.3■■■□□ 2.76
LSM7-201ENST00000252622 MASTLQ96GX5 879 aa32.3■■■□□ 2.76
LSM7-201ENST00000252622 STK31Q9BXU1 1019 aa32.3■■■□□ 2.76
LSM7-201ENST00000252622 EXOSC9Q06265 439 aaKnown RBP32.29■■■□□ 2.76
LSM7-201ENST00000252622 ERFEQ4G0M1 354 aa32.29■■■□□ 2.76
LSM7-201ENST00000252622 ZNF622Q969S3 477 aaKnown RBP eCLIP32.29■■■□□ 2.76
LSM7-201ENST00000252622 TNRC6CQ9HCJ0 1690 aaKnown RBP32.29■■■□□ 2.76
LSM7-201ENST00000252622 ARFGEF2Q9Y6D5 1785 aa32.28■■■□□ 2.76
LSM7-201ENST00000252622 NLRP10Q86W26 655 aa32.28■■■□□ 2.76
LSM7-201ENST00000252622 UTP14AQ9BVJ6 771 aaKnown RBP32.28■■■□□ 2.76
LSM7-201ENST00000252622 ARHGAP27Q6ZUM4 889 aa32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms