RNA–Protein interactions for RNA: ENST00000252244.3

KRT1-201, Transcript of keratin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT1, Length 2,451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1-201ENST00000252244 PIP4K2AP48426 406 aaPredicted RBP23.83■■□□□ 1.4
KRT1-201ENST00000252244 SKOR2Q2VWA4 1001 aaPredicted RBP23.83■■□□□ 1.4
KRT1-201ENST00000252244 UPF3BQ9BZI7 483 aaKnown RBP23.83■■□□□ 1.4
KRT1-201ENST00000252244 COPS6Q7L5N1 327 aa23.82■■□□□ 1.4
KRT1-201ENST00000252244 USP42Q9H9J4 1324 aaKnown RBP23.82■■□□□ 1.4
KRT1-201ENST00000252244 USP16Q9Y5T5 823 aa23.82■■□□□ 1.4
KRT1-201ENST00000252244 UTYO14607 1347 aa23.81■■□□□ 1.4
KRT1-201ENST00000252244 TTC41PQ6P2S7 1318 aa23.81■■□□□ 1.4
KRT1-201ENST00000252244 SGSM2O43147 1006 aa23.81■■□□□ 1.4
KRT1-201ENST00000252244 DCAF5Q96JK2 942 aa23.81■■□□□ 1.4
KRT1-201ENST00000252244 GLRX3O76003 335 aaKnown RBP23.81■■□□□ 1.4
KRT1-201ENST00000252244 LARP1Q6PKG0 1096 aaKnown RBP23.81■■□□□ 1.4
KRT1-201ENST00000252244 TTC5Q8N0Z6 440 aa23.81■■□□□ 1.4
KRT1-201ENST00000252244 MCTP1Q6DN14 999 aa23.8■■□□□ 1.4
KRT1-201ENST00000252244 CWC27Q6UX04 472 aaKnown RBP23.8■■□□□ 1.4
KRT1-201ENST00000252244 IFIT2P09913 472 aaKnown RBP23.79■■□□□ 1.4
KRT1-201ENST00000252244 HSPA4P34932 840 aa23.79■■□□□ 1.4
KRT1-201ENST00000252244 MCM2P49736 904 aa23.79■■□□□ 1.4
KRT1-201ENST00000252244 ERC1Q8IUD2 1116 aa23.79■■□□□ 1.4
KRT1-201ENST00000252244 PANK2Q9BZ23 570 aa23.79■■□□□ 1.4
KRT1-201ENST00000252244 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.79■■□□□ 1.4
KRT1-201ENST00000252244 MYD88Q99836 296 aa23.79■■□□□ 1.4
KRT1-201ENST00000252244 ZDHHC9Q9Y397 364 aa23.79■■□□□ 1.4
KRT1-201ENST00000252244 NEURL1BA8MQ27 555 aa23.78■■□□□ 1.4
KRT1-201ENST00000252244 NEXNQ0ZGT2 675 aa23.78■■□□□ 1.4
KRT1-201ENST00000252244 ECHDC1Q9NTX5 307 aa23.78■■□□□ 1.4
KRT1-201ENST00000252244 SNRPA1P09661 255 aaKnown RBP23.78■■□□□ 1.4
KRT1-201ENST00000252244 AACSQ86V21 672 aa23.78■■□□□ 1.4
KRT1-201ENST00000252244 IL17RAQ96F46 866 aa23.78■■□□□ 1.4
KRT1-201ENST00000252244 RAD50Q92878 1312 aa23.78■■□□□ 1.4
KRT1-201ENST00000252244 ABCC6O95255 1503 aa23.78■■□□□ 1.4
KRT1-201ENST00000252244 SASH1O94885 1247 aa23.77■■□□□ 1.4
KRT1-201ENST00000252244 SIL1Q9H173 461 aa23.77■■□□□ 1.4
KRT1-201ENST00000252244 PKD1L3Q7Z443 1732 aa23.77■■□□□ 1.4
KRT1-201ENST00000252244 MRC1P22897 1456 aa23.77■■□□□ 1.4
KRT1-201ENST00000252244 GCKRQ14397 625 aa23.76■■□□□ 1.39
KRT1-201ENST00000252244 LSG1Q9H089 658 aaKnown RBP23.76■■□□□ 1.39
KRT1-201ENST00000252244 EPB41L2O43491 1005 aaKnown RBP23.76■■□□□ 1.39
KRT1-201ENST00000252244 CABP4P57796 275 aa23.76■■□□□ 1.39
KRT1-201ENST00000252244 G3BP1Q13283 466 aaKnown RBP eCLIP23.76■■□□□ 1.39
KRT1-201ENST00000252244 BRINP3Q76B58 766 aa23.76■■□□□ 1.39
KRT1-201ENST00000252244 LRP10Q7Z4F1 713 aa23.76■■□□□ 1.39
KRT1-201ENST00000252244 KLHDC4Q8TBB5 520 aa23.76■■□□□ 1.39
KRT1-201ENST00000252244 FMNL2Q96PY5 1086 aa23.76■■□□□ 1.39
KRT1-201ENST00000252244 METTL22Q9BUU2 404 aaPredicted RBP23.76■■□□□ 1.39
KRT1-201ENST00000252244 DDX49Q9Y6V7 483 aaKnown RBP23.76■■□□□ 1.39
KRT1-201ENST00000252244 CPDO75976 1380 aa23.76■■□□□ 1.39
KRT1-201ENST00000252244 ANKRD13DQ6ZTN6 518 aa23.75■■□□□ 1.39
KRT1-201ENST00000252244 JARID2Q92833 1246 aaPredicted RBP23.75■■□□□ 1.39
KRT1-201ENST00000252244 GPATCH3Q96I76 525 aa23.75■■□□□ 1.39
KRT1-201ENST00000252244 XIRP1Q702N8 1843 aaKnown RBP23.75■■□□□ 1.39
KRT1-201ENST00000252244 MRE11P49959 708 aa23.75■■□□□ 1.39
KRT1-201ENST00000252244 CUL4AQ13619 759 aa23.75■■□□□ 1.39
KRT1-201ENST00000252244 FOXD4L5Q5VV16 416 aaPredicted RBP23.75■■□□□ 1.39
KRT1-201ENST00000252244 FOXD4L4Q8WXT5 416 aaPredicted RBP23.75■■□□□ 1.39
KRT1-201ENST00000252244 EPHA10Q5JZY3 1008 aa23.74■■□□□ 1.39
KRT1-201ENST00000252244 GAS2L3Q86XJ1 694 aa23.74■■□□□ 1.39
KRT1-201ENST00000252244 EAF2Q96CJ1 260 aaPredicted RBP23.74■■□□□ 1.39
KRT1-201ENST00000252244 DIAPH3Q9NSV4 1193 aa23.74■■□□□ 1.39
KRT1-201ENST00000252244 CCDC8Q9H0W5 538 aaPredicted RBP23.74■■□□□ 1.39
KRT1-201ENST00000252244 GRPEL1Q9HAV7 217 aa23.74■■□□□ 1.39
KRT1-201ENST00000252244 KIAA1211Q6ZU35 1233 aa23.73■■□□□ 1.39
KRT1-201ENST00000252244 CHAMP1Q96JM3 812 aa23.73■■□□□ 1.39
KRT1-201ENST00000252244 SNX14Q9Y5W7 946 aa23.73■■□□□ 1.39
KRT1-201ENST00000252244 KLHL40Q2TBA0 621 aa23.73■■□□□ 1.39
KRT1-201ENST00000252244 RASEFQ8IZ41 740 aa23.72■■□□□ 1.39
KRT1-201ENST00000252244 LMBRD1Q9NUN5 540 aa23.72■■□□□ 1.39
KRT1-201ENST00000252244 TLR7Q9NYK1 1049 aaKnown RBP23.72■■□□□ 1.39
KRT1-201ENST00000252244 PRDM11Q9NQV5 511 aa23.71■■□□□ 1.39
KRT1-201ENST00000252244 PLEKHG2Q9H7P9 1386 aa23.7■■□□□ 1.38
KRT1-201ENST00000252244 TOM1L2Q6ZVM7 507 aa23.7■■□□□ 1.38
KRT1-201ENST00000252244 AFDNP55196 1824 aaKnown RBP23.69■■□□□ 1.38
KRT1-201ENST00000252244 ATP5J2-PTCD1G3V325 749 aa23.69■■□□□ 1.38
KRT1-201ENST00000252244 PTCD1O75127 700 aaKnown RBP23.69■■□□□ 1.38
KRT1-201ENST00000252244 RUFY2Q8WXA3 655 aa23.69■■□□□ 1.38
KRT1-201ENST00000252244 EVI5LQ96CN4 794 aa23.69■■□□□ 1.38
KRT1-201ENST00000252244 INTS4Q96HW7 963 aaKnown RBP23.69■■□□□ 1.38
KRT1-201ENST00000252244 ISY1Q9ULR0 285 aaKnown RBP23.69■■□□□ 1.38
KRT1-201ENST00000252244 PTH1RQ03431 593 aa23.69■■□□□ 1.38
KRT1-201ENST00000252244 PRPF40AO75400 957 aaKnown RBP23.68■■□□□ 1.38
KRT1-201ENST00000252244 NCLP19338 710 aaKnown RBP23.68■■□□□ 1.38
KRT1-201ENST00000252244 UBE3BQ7Z3V4 1068 aa23.68■■□□□ 1.38
KRT1-201ENST00000252244 WDR17Q8IZU2 1322 aa23.68■■□□□ 1.38
KRT1-201ENST00000252244 GLI3P10071 1580 aa23.67■■□□□ 1.38
KRT1-201ENST00000252244 ARFGEF2Q9Y6D5 1785 aa23.67■■□□□ 1.38
KRT1-201ENST00000252244 BRD1O95696 1058 aa23.66■■□□□ 1.38
KRT1-201ENST00000252244 ZCRB1Q8TBF4 217 aaKnown RBP23.66■■□□□ 1.38
KRT1-201ENST00000252244 BOLA2Q9H3K6 86 aa23.66■■□□□ 1.38
KRT1-201ENST00000252244 CPA1P15085 419 aa23.66■■□□□ 1.38
KRT1-201ENST00000252244 TTC14Q96N46 770 aa23.66■■□□□ 1.38
KRT1-201ENST00000252244 LARP6Q9BRS8 491 aaKnown RBP23.66■■□□□ 1.38
KRT1-201ENST00000252244 CAVIN1Q6NZI2 390 aaKnown RBP23.65■■□□□ 1.38
KRT1-201ENST00000252244 FAM227BQ96M60 508 aa23.65■■□□□ 1.38
KRT1-201ENST00000252244 PARP4Q9UKK3 1724 aaKnown RBP23.65■■□□□ 1.38
KRT1-201ENST00000252244 PCDH11XQ9BZA7 1347 aa23.64■■□□□ 1.38
KRT1-201ENST00000252244 PCDH11YQ9BZA8 1340 aa23.64■■□□□ 1.38
KRT1-201ENST00000252244 PRPF40BQ6NWY9 871 aaKnown RBP23.64■■□□□ 1.37
KRT1-201ENST00000252244 A0A087WZG4 1122 aa23.64■■□□□ 1.37
KRT1-201ENST00000252244 AK2P54819 239 aa23.64■■□□□ 1.37
KRT1-201ENST00000252244 LAMB4A4D0S4 1761 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms