RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 PIBF1Q8WXW3 757 aa5.42□□□□□ -1.54
VPS13C-201ENST00000249837 MAP3K19Q56UN5 1328 aa5.42□□□□□ -1.54
VPS13C-201ENST00000249837 IGSF3O75054 1194 aa5.42□□□□□ -1.54
VPS13C-201ENST00000249837 PIK3R4Q99570 1358 aa5.42□□□□□ -1.54
VPS13C-201ENST00000249837 CCAR1Q8IX12 1150 aaKnown RBP5.42□□□□□ -1.54
VPS13C-201ENST00000249837 STRN4Q9NRL3 753 aa5.42□□□□□ -1.54
VPS13C-201ENST00000249837 PIP4K2AP48426 406 aaPredicted RBP5.42□□□□□ -1.54
VPS13C-201ENST00000249837 BAZ2BQ9UIF8 2168 aaKnown RBP5.42□□□□□ -1.54
VPS13C-201ENST00000249837 CDC42BPBQ9Y5S2 1711 aa5.42□□□□□ -1.54
VPS13C-201ENST00000249837 SCAND2PQ9GZW5 306 aaPredicted RBP5.42□□□□□ -1.54
VPS13C-201ENST00000249837 SIRT2Q8IXJ6 389 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 EVI5LQ96CN4 794 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 DNAJC25Q9H1X3 360 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 TMX1Q9H3N1 280 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 NPATQ14207 1427 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 C8orf76Q96K31 380 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 HYPKQ9NX55 129 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 DACT1Q9NYF0 836 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 CLIP2Q9UDT6 1046 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 PREX2Q70Z35 1606 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 GOLIM4O00461 696 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 ANKRD20A12PQ8NF67 263 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 XAGE3Q8WTP9 111 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 BRF1Q92994 677 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 PLEKHF1Q96S99 279 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 EYA1Q99502 592 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 CHL1O00533 1208 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 DHX16O60231 1041 aaKnown RBP5.41□□□□□ -1.54
VPS13C-201ENST00000249837 POLR3GO15318 223 aaPredicted RBP5.41□□□□□ -1.54
VPS13C-201ENST00000249837 AK2P54819 239 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 GPS2Q13227 327 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 MAPK8IP2Q13387 824 aaPredicted RBP5.41□□□□□ -1.54
VPS13C-201ENST00000249837 SLC39A6Q13433 755 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 VPS37DQ86XT2 251 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 CLTCL1P53675 1640 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 STX1AQ16623 288 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 JMYQ8N9B5 988 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 TBC1D2BQ9UPU7 963 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 DDX46Q7L014 1031 aaKnown RBP5.41□□□□□ -1.54
VPS13C-201ENST00000249837 GPT2Q8TD30 523 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 USP16Q9Y5T5 823 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 TCHHQ07283 1943 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 CLSTN1O94985 981 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 UBE3BQ7Z3V4 1068 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 ANO10Q9NW15 660 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 ABCC4O15439 1325 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 PNMA6EA0A0J9YXQ4 647 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 TEX35Q5T0J7 233 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 HS1BP3Q53T59 392 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 KIF6Q6ZMV9 814 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 PHAXQ9H814 394 aaKnown RBP5.41□□□□□ -1.54
VPS13C-201ENST00000249837 DBF4Q9UBU7 674 aaPredicted RBP5.41□□□□□ -1.54
VPS13C-201ENST00000249837 RTL1A6NKG5 1358 aa5.41□□□□□ -1.54
VPS13C-201ENST00000249837 CFAP100Q494V2 611 aa5.4□□□□□ -1.54
VPS13C-201ENST00000249837 SYT1P21579 422 aa5.4□□□□□ -1.54
VPS13C-201ENST00000249837 KSR2Q6VAB6 950 aa5.4□□□□□ -1.54
VPS13C-201ENST00000249837 NUP133Q8WUM0 1156 aa5.4□□□□□ -1.54
VPS13C-201ENST00000249837 ZBTB9Q96C00 473 aa5.4□□□□□ -1.54
VPS13C-201ENST00000249837 ADCY10Q96PN6 1610 aa5.4□□□□□ -1.54
VPS13C-201ENST00000249837 IFIT1P09914 478 aaKnown RBP5.4□□□□□ -1.54
VPS13C-201ENST00000249837 CCDC144CPQ8IYA2 1237 aa5.4□□□□□ -1.54
VPS13C-201ENST00000249837 U3KPZ7 1027 aaPredicted RBP5.4□□□□□ -1.54
VPS13C-201ENST00000249837 SKIDA1Q1XH10 827 aa5.4□□□□□ -1.54
VPS13C-201ENST00000249837 KIF18AQ8NI77 898 aa5.4□□□□□ -1.54
VPS13C-201ENST00000249837 DDX19AQ9NUU7 478 aaKnown RBP5.4□□□□□ -1.54
VPS13C-201ENST00000249837 CTNNA3Q9UI47 895 aa5.4□□□□□ -1.54
VPS13C-201ENST00000249837 GOLGA8BA8MQT2 603 aa5.4□□□□□ -1.54
VPS13C-201ENST00000249837 ZFYVE9O95405 1425 aa5.4□□□□□ -1.54
VPS13C-201ENST00000249837 IDH1O75874 414 aaKnown RBP5.4□□□□□ -1.55
VPS13C-201ENST00000249837 ZNF518AQ6AHZ1 1483 aa5.4□□□□□ -1.55
VPS13C-201ENST00000249837 VPS53Q5VIR6 699 aa5.4□□□□□ -1.55
VPS13C-201ENST00000249837 CREB3L3Q68CJ9 461 aa5.4□□□□□ -1.55
VPS13C-201ENST00000249837 ZBTB3Q9H5J0 574 aa5.4□□□□□ -1.55
VPS13C-201ENST00000249837 ERICH2A1L162 156 aa5.4□□□□□ -1.55
VPS13C-201ENST00000249837 GPTP24298 496 aa5.4□□□□□ -1.55
VPS13C-201ENST00000249837 NOL7Q9UMY1 257 aaKnown RBP5.4□□□□□ -1.55
VPS13C-201ENST00000249837 PPFIBP1Q86W92 1011 aa5.4□□□□□ -1.55
VPS13C-201ENST00000249837 PPP1R9BQ96SB3 815 aa5.4□□□□□ -1.55
VPS13C-201ENST00000249837 CHD1O14646 1710 aa5.39□□□□□ -1.55
VPS13C-201ENST00000249837 SPHKAPQ2M3C7 1700 aa5.39□□□□□ -1.55
VPS13C-201ENST00000249837 SFPQP23246 707 aaKnown RBP eCLIP5.39□□□□□ -1.55
VPS13C-201ENST00000249837 TDO2P48775 406 aa5.39□□□□□ -1.55
VPS13C-201ENST00000249837 ORC3Q9UBD5 711 aaPredicted RBP5.39□□□□□ -1.55
VPS13C-201ENST00000249837 URI1O94763 535 aaPredicted RBP5.39□□□□□ -1.55
VPS13C-201ENST00000249837 SNW1Q13573 536 aaKnown RBP5.39□□□□□ -1.55
VPS13C-201ENST00000249837 CWF19L2Q2TBE0 894 aaKnown RBP5.39□□□□□ -1.55
VPS13C-201ENST00000249837 CAGE1Q8TC20 777 aa5.39□□□□□ -1.55
VPS13C-201ENST00000249837 ANKRD24Q8TF21 1146 aa5.39□□□□□ -1.55
VPS13C-201ENST00000249837 LRRC59Q96AG4 307 aaKnown RBP5.39□□□□□ -1.55
VPS13C-201ENST00000249837 UHRF1BP1LA0JNW5 1464 aa5.39□□□□□ -1.55
VPS13C-201ENST00000249837 POLR3DP05423 398 aaPredicted RBP5.39□□□□□ -1.55
VPS13C-201ENST00000249837 FAM227BQ96M60 508 aa5.39□□□□□ -1.55
VPS13C-201ENST00000249837 IQGAP3Q86VI3 1631 aa5.39□□□□□ -1.55
VPS13C-201ENST00000249837 CCDC129Q6ZRS4 1044 aa5.39□□□□□ -1.55
VPS13C-201ENST00000249837 TOM1L2Q6ZVM7 507 aa5.39□□□□□ -1.55
VPS13C-201ENST00000249837 FILIP1LQ4L180 1135 aa5.39□□□□□ -1.55
VPS13C-201ENST00000249837 TMC6Q7Z403 805 aa5.39□□□□□ -1.55
VPS13C-201ENST00000249837 CHST3Q7LGC8 479 aa5.39□□□□□ -1.55
VPS13C-201ENST00000249837 A0A087WZG4 1122 aa5.39□□□□□ -1.55
VPS13C-201ENST00000249837 CCDC158Q5M9N0 1113 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms