RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 EXOC6BQ9Y2D4 811 aa8.5□□□□□ -1.05
SSR1-201ENST00000244763 BMP15O95972 392 aa8.5□□□□□ -1.05
SSR1-201ENST00000244763 PDCL2Q8N4E4 241 aa8.5□□□□□ -1.05
SSR1-201ENST00000244763 MAP3K1Q13233 1512 aa8.5□□□□□ -1.05
SSR1-201ENST00000244763 NF2P35240 595 aa8.5□□□□□ -1.05
SSR1-201ENST00000244763 PIK3R4Q99570 1358 aa8.5□□□□□ -1.05
SSR1-201ENST00000244763 KIF4AO95239 1232 aa8.5□□□□□ -1.05
SSR1-201ENST00000244763 HOOK3Q86VS8 718 aa8.5□□□□□ -1.05
SSR1-201ENST00000244763 BCL11BQ9C0K0 894 aaPredicted RBP8.5□□□□□ -1.05
SSR1-201ENST00000244763 TSPY2A6NKD2 308 aa8.49□□□□□ -1.05
SSR1-201ENST00000244763 PAFAH1B1P43034 410 aa8.49□□□□□ -1.05
SSR1-201ENST00000244763 NLRP3Q96P20 1036 aa8.49□□□□□ -1.05
SSR1-201ENST00000244763 CCDC85AQ96PX6 553 aaPredicted RBP8.49□□□□□ -1.05
SSR1-201ENST00000244763 USP8P40818 1118 aa8.49□□□□□ -1.05
SSR1-201ENST00000244763 NBPF8Q3BBV2 869 aa8.49□□□□□ -1.05
SSR1-201ENST00000244763 FANCAO15360 1455 aa8.49□□□□□ -1.05
SSR1-201ENST00000244763 NAA15Q9BXJ9 866 aaKnown RBP8.49□□□□□ -1.05
SSR1-201ENST00000244763 GRIN2AQ12879 1464 aa8.49□□□□□ -1.05
SSR1-201ENST00000244763 IL16Q14005 1332 aa8.49□□□□□ -1.05
SSR1-201ENST00000244763 IFI16Q16666 785 aaKnown RBP8.49□□□□□ -1.05
SSR1-201ENST00000244763 TAX1BP1Q86VP1 789 aa8.49□□□□□ -1.05
SSR1-201ENST00000244763 INCENPQ9NQS7 918 aa8.49□□□□□ -1.05
SSR1-201ENST00000244763 MCM10Q7L590 875 aa8.49□□□□□ -1.05
SSR1-201ENST00000244763 ZNF622Q969S3 477 aaKnown RBP eCLIP8.49□□□□□ -1.051e-9■■■□□ 15.3
SSR1-201ENST00000244763 GCOM1H8Y6P7 765 aaPredicted RBP8.49□□□□□ -1.05
SSR1-201ENST00000244763 MYZAPP0CAP1 466 aa8.49□□□□□ -1.05
SSR1-201ENST00000244763 IDI1Q13907 227 aa8.49□□□□□ -1.05
SSR1-201ENST00000244763 GIGYF2Q6Y7W6 1299 aaKnown RBP8.49□□□□□ -1.05
SSR1-201ENST00000244763 SCAF11Q99590 1463 aaKnown RBP8.49□□□□□ -1.05
SSR1-201ENST00000244763 KIF5CO60282 957 aa8.49□□□□□ -1.05
SSR1-201ENST00000244763 NBPF14Q5TI25 921 aa8.49□□□□□ -1.05
SSR1-201ENST00000244763 CNNM3Q8NE01 707 aa8.49□□□□□ -1.05
SSR1-201ENST00000244763 ZCRB1Q8TBF4 217 aaKnown RBP8.48□□□□□ -1.05
SSR1-201ENST00000244763 STX6O43752 255 aa8.48□□□□□ -1.05
SSR1-201ENST00000244763 PLVAPQ9BX97 442 aa8.48□□□□□ -1.05
SSR1-201ENST00000244763 CNNM2Q9H8M5 875 aa8.48□□□□□ -1.05
SSR1-201ENST00000244763 TNRQ92752 1358 aa8.48□□□□□ -1.05
SSR1-201ENST00000244763 NCBP1Q09161 790 aaKnown RBP8.48□□□□□ -1.05
SSR1-201ENST00000244763 MFSD6Q6ZSS7 791 aa8.48□□□□□ -1.05
SSR1-201ENST00000244763 BACH2Q9BYV9 841 aa8.48□□□□□ -1.05
SSR1-201ENST00000244763 CAVIN2O95810 425 aa8.48□□□□□ -1.05
SSR1-201ENST00000244763 NUTM1Q86Y26 1132 aa8.48□□□□□ -1.05
SSR1-201ENST00000244763 ITSN2Q9NZM3 1697 aa8.48□□□□□ -1.05
SSR1-201ENST00000244763 GOLGA8AA7E2F4 631 aa8.48□□□□□ -1.05
SSR1-201ENST00000244763 GOLGA8BA8MQT2 603 aa8.48□□□□□ -1.05
SSR1-201ENST00000244763 PIBF1Q8WXW3 757 aa8.48□□□□□ -1.05
SSR1-201ENST00000244763 CRACR2AQ9BSW2 395 aa8.48□□□□□ -1.05
SSR1-201ENST00000244763 KRT23Q9C075 422 aa8.48□□□□□ -1.05
SSR1-201ENST00000244763 SPINK5Q9NQ38 1064 aaPredicted RBP8.48□□□□□ -1.05
SSR1-201ENST00000244763 CDK13Q14004 1512 aaKnown RBP8.48□□□□□ -1.05
SSR1-201ENST00000244763 IARSP41252 1262 aaKnown RBP8.48□□□□□ -1.05
SSR1-201ENST00000244763 UTP14AQ9BVJ6 771 aaKnown RBP8.48□□□□□ -1.05
SSR1-201ENST00000244763 LIMCH1Q9UPQ0 1083 aa8.48□□□□□ -1.05
SSR1-201ENST00000244763 RBM27Q9P2N5 1060 aaKnown RBP8.48□□□□□ -1.05
SSR1-201ENST00000244763 CCDC174Q6PII3 467 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 C16orf71Q8IYS4 520 aaPredicted RBP8.47□□□□□ -1.05
SSR1-201ENST00000244763 NCOA7Q8NI08 942 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 UBA7P41226 1012 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 FLIIQ13045 1269 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 GRIPAP1Q4V328 841 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 GOLGA6L9A6NEM1 432 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 POLD1P28340 1107 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 TMEM67Q5HYA8 995 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 CCDC183Q5T5S1 534 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 ERMNQ8TAM6 284 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 ECHDC1Q9NTX5 307 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 NEMFO60524 1076 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 ZSCAN16Q9H4T2 348 aaPredicted RBP8.47□□□□□ -1.05
SSR1-201ENST00000244763 MAP3K2Q9Y2U5 619 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 NAIPQ13075 1403 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 GOLGA6L10A0A0M3HER8 536 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 CTNNA2P26232 953 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 PABPN1LA6NDY0 278 aaKnown RBP8.47□□□□□ -1.05
SSR1-201ENST00000244763 SFPQP23246 707 aaKnown RBP eCLIP8.47□□□□□ -1.05
SSR1-201ENST00000244763 SYCP3Q8IZU3 236 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 ANKRD36BQ8N2N9 1353 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 NBPF6Q5VWK0 638 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 NBPF5PQ86XG9 351 aaPredicted RBP8.47□□□□□ -1.05
SSR1-201ENST00000244763 ANKRD24Q8TF21 1146 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 DDX11Q96FC9 970 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 NBPF4Q96M43 638 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 RMND1Q9NWS8 449 aa8.47□□□□□ -1.05
SSR1-201ENST00000244763 PLCG2P16885 1265 aa8.46□□□□□ -1.05
SSR1-201ENST00000244763 GTPBP4Q9BZE4 634 aaKnown RBP8.46□□□□□ -1.05
SSR1-201ENST00000244763 TTC12Q9H892 705 aaPredicted RBP8.46□□□□□ -1.05
SSR1-201ENST00000244763 YEATS4O95619 227 aa8.46□□□□□ -1.05
SSR1-201ENST00000244763 MAP2K1Q02750 393 aaPredicted RBP8.46□□□□□ -1.05
SSR1-201ENST00000244763 ANKRD13DQ6ZTN6 518 aa8.46□□□□□ -1.05
SSR1-201ENST00000244763 UBA5Q9GZZ9 404 aa8.46□□□□□ -1.05
SSR1-201ENST00000244763 C14orf93Q9H972 538 aaKnown RBP8.46□□□□□ -1.05
SSR1-201ENST00000244763 TOP1P11387 765 aaKnown RBP8.46□□□□□ -1.06
SSR1-201ENST00000244763 PPM1FP49593 454 aaPredicted RBP8.46□□□□□ -1.06
SSR1-201ENST00000244763 UBXN4Q92575 508 aa8.46□□□□□ -1.06
SSR1-201ENST00000244763 CENPHQ9H3R5 247 aa8.46□□□□□ -1.06
SSR1-201ENST00000244763 DDX19AQ9NUU7 478 aaKnown RBP8.46□□□□□ -1.06
SSR1-201ENST00000244763 RARSP54136 660 aaKnown RBP8.46□□□□□ -1.06
SSR1-201ENST00000244763 DYDC1Q8WWB3 177 aa8.46□□□□□ -1.06
SSR1-201ENST00000244763 PPM1EQ8WY54 764 aa8.46□□□□□ -1.06
SSR1-201ENST00000244763 GPTP24298 496 aa8.46□□□□□ -1.06
SSR1-201ENST00000244763 NME9Q86XW9 330 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms