RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 BCORQ6W2J9 1755 aa18.58■□□□□ 0.56
DDX39A-201ENST00000242776 GNAT3A8MTJ3 354 aa18.58■□□□□ 0.56
DDX39A-201ENST00000242776 CAMTA2O94983 1202 aa18.58■□□□□ 0.56
DDX39A-201ENST00000242776 IL6STP40189 918 aaPredicted RBP18.58■□□□□ 0.56
DDX39A-201ENST00000242776 DZIP3Q86Y13 1208 aaKnown RBP18.58■□□□□ 0.56
DDX39A-201ENST00000242776 PDZRN3Q9UPQ7 1066 aa18.58■□□□□ 0.56
DDX39A-201ENST00000242776 FAM177BA6PVY3 158 aa18.57■□□□□ 0.56
DDX39A-201ENST00000242776 SRGNP10124 158 aa18.57■□□□□ 0.56
DDX39A-201ENST00000242776 STYK1Q6J9G0 422 aa18.57■□□□□ 0.56
DDX39A-201ENST00000242776 OLFM4Q6UX06 510 aa18.57■□□□□ 0.56
DDX39A-201ENST00000242776 MASTLQ96GX5 879 aa18.57■□□□□ 0.56
DDX39A-201ENST00000242776 FMNL2Q96PY5 1086 aa18.57■□□□□ 0.56
DDX39A-201ENST00000242776 TEX13AQ9BXU3 409 aaPredicted RBP18.57■□□□□ 0.56
DDX39A-201ENST00000242776 CLEC11AQ9Y240 323 aa18.57■□□□□ 0.56
DDX39A-201ENST00000242776 LTBP3Q9NS15 1303 aa18.57■□□□□ 0.56
DDX39A-201ENST00000242776 CNTNAP1P78357 1384 aa18.56■□□□□ 0.56
DDX39A-201ENST00000242776 SCN4AP35499 1836 aa18.55■□□□□ 0.56
DDX39A-201ENST00000242776 PRAMEF22A3QJZ6 481 aa18.55■□□□□ 0.56
DDX39A-201ENST00000242776 TAF1DQ9H5J8 278 aaPredicted RBP18.55■□□□□ 0.56
DDX39A-201ENST00000242776 ZNF277Q9NRM2 450 aaPredicted RBP18.55■□□□□ 0.56
DDX39A-201ENST00000242776 KIF7Q2M1P5 1343 aa18.55■□□□□ 0.56
DDX39A-201ENST00000242776 ZNF541Q9H0D2 1346 aa18.55■□□□□ 0.56
DDX39A-201ENST00000242776 VEGFBP49765 207 aa18.54■□□□□ 0.56
DDX39A-201ENST00000242776 LDHDQ86WU2 507 aa18.54■□□□□ 0.56
DDX39A-201ENST00000242776 NBPF5PQ86XG9 351 aaPredicted RBP18.54■□□□□ 0.56
DDX39A-201ENST00000242776 GAS2L2Q8NHY3 880 aa18.54■□□□□ 0.56
DDX39A-201ENST00000242776 AIDAQ96BJ3 306 aa18.54■□□□□ 0.56
DDX39A-201ENST00000242776 IQCA1LA6NCM1 817 aa18.53■□□□□ 0.56
DDX39A-201ENST00000242776 BTBD11A6QL63 1104 aa18.53■□□□□ 0.56
DDX39A-201ENST00000242776 USP16Q9Y5T5 823 aa18.53■□□□□ 0.56
DDX39A-201ENST00000242776 CCDC93Q567U6 631 aa18.52■□□□□ 0.56
DDX39A-201ENST00000242776 SOGA3Q5TF21 947 aa18.52■□□□□ 0.56
DDX39A-201ENST00000242776 PASKQ96RG2 1323 aa18.52■□□□□ 0.56
DDX39A-201ENST00000242776 TMEM88BA6NKF7 163 aa18.52■□□□□ 0.55
DDX39A-201ENST00000242776 COL3A1P02461 1466 aaPredicted RBP18.51■□□□□ 0.55
DDX39A-201ENST00000242776 RNF123Q5XPI4 1314 aa18.5■□□□□ 0.55
DDX39A-201ENST00000242776 CTCFP49711 727 aaPredicted RBP18.5■□□□□ 0.55
DDX39A-201ENST00000242776 LBX1P52954 281 aa18.5■□□□□ 0.55
DDX39A-201ENST00000242776 C7orf43Q8WVR3 580 aa18.5■□□□□ 0.55
DDX39A-201ENST00000242776 PHACTR3Q96KR7 559 aa18.5■□□□□ 0.55
DDX39A-201ENST00000242776 HACL1Q9UJ83 578 aa18.5■□□□□ 0.55
DDX39A-201ENST00000242776 NPR1P16066 1061 aa18.49■□□□□ 0.55
DDX39A-201ENST00000242776 EPHX2P34913 555 aa18.49■□□□□ 0.55
DDX39A-201ENST00000242776 FKBP4Q02790 459 aaKnown RBP eCLIP18.49■□□□□ 0.55
DDX39A-201ENST00000242776 MAP1SQ66K74 1059 aaPredicted RBP18.49■□□□□ 0.55
DDX39A-201ENST00000242776 L3MBTL3Q96JM7 780 aaPredicted RBP18.49■□□□□ 0.55
DDX39A-201ENST00000242776 NIP7Q9Y221 180 aaKnown RBP eCLIP18.49■□□□□ 0.55
DDX39A-201ENST00000242776 PER1O15534 1290 aaPredicted RBP18.48■□□□□ 0.55
DDX39A-201ENST00000242776 ITGBL1O95965 494 aaPredicted RBP18.48■□□□□ 0.55
DDX39A-201ENST00000242776 PRKAR2BP31323 418 aa18.48■□□□□ 0.55
DDX39A-201ENST00000242776 PRDM10Q9NQV6 1147 aa18.47■□□□□ 0.55
DDX39A-201ENST00000242776 ZNF652Q9Y2D9 606 aa18.47■□□□□ 0.55
DDX39A-201ENST00000242776 GRM1Q13255 1194 aa18.46■□□□□ 0.55
DDX39A-201ENST00000242776 MCM10Q7L590 875 aa18.46■□□□□ 0.55
DDX39A-201ENST00000242776 CNTROBQ8N137 903 aa18.46■□□□□ 0.55
DDX39A-201ENST00000242776 SYNE4Q8N205 404 aa18.46■□□□□ 0.55
DDX39A-201ENST00000242776 ABT1Q9ULW3 272 aaKnown RBP18.46■□□□□ 0.55
DDX39A-201ENST00000242776 CEMIPQ8WUJ3 1361 aa18.46■□□□□ 0.55
DDX39A-201ENST00000242776 GTF2E1P29083 439 aaPredicted RBP18.46■□□□□ 0.54
DDX39A-201ENST00000242776 IARSP41252 1262 aaKnown RBP18.46■□□□□ 0.54
DDX39A-201ENST00000242776 DCTN1Q14203 1278 aa18.46■□□□□ 0.54
DDX39A-201ENST00000242776 TPTE2Q6XPS3 522 aa18.46■□□□□ 0.54
DDX39A-201ENST00000242776 NGEFQ8N5V2 710 aa18.46■□□□□ 0.54
DDX39A-201ENST00000242776 GJA3Q9Y6H8 435 aa18.46■□□□□ 0.54
DDX39A-201ENST00000242776 ADAMTSL1Q8N6G6 1762 aa18.45■□□□□ 0.54
DDX39A-201ENST00000242776 DEFB115Q30KQ5 88 aa18.45■□□□□ 0.54
DDX39A-201ENST00000242776 PAXIP1Q6ZW49 1069 aaPredicted RBP18.45■□□□□ 0.54
DDX39A-201ENST00000242776 WBP1LQ9NX94 342 aa18.45■□□□□ 0.54
DDX39A-201ENST00000242776 NBPF26B4DH59 902 aa18.44■□□□□ 0.54
DDX39A-201ENST00000242776 SNRPA1P09661 255 aaKnown RBP18.44■□□□□ 0.54
DDX39A-201ENST00000242776 FMR1Q06787 632 aaKnown RBP eCLIP18.44■□□□□ 0.54
DDX39A-201ENST00000242776 HLFQ16534 295 aa18.44■□□□□ 0.54
DDX39A-201ENST00000242776 NBPF10Q6P3W6 841 aaKnown RBP18.44■□□□□ 0.54
DDX39A-201ENST00000242776 RTKN2Q8IZC4 609 aa18.44■□□□□ 0.54
DDX39A-201ENST00000242776 NBPF15Q8N660 670 aa18.44■□□□□ 0.54
DDX39A-201ENST00000242776 TCERG1O14776 1098 aaKnown RBP18.43■□□□□ 0.54
DDX39A-201ENST00000242776 CLEC4GQ6UXB4 293 aa18.43■□□□□ 0.54
DDX39A-201ENST00000242776 RTF1Q92541 710 aaKnown RBP18.43■□□□□ 0.54
DDX39A-201ENST00000242776 HSPA8P11142 646 aaKnown RBP18.42■□□□□ 0.54
DDX39A-201ENST00000242776 SLC51AQ86UW1 340 aa18.42■□□□□ 0.54
DDX39A-201ENST00000242776 NUTM1Q86Y26 1132 aa18.42■□□□□ 0.54
DDX39A-201ENST00000242776 RSPH6AQ9H0K4 717 aa18.42■□□□□ 0.54
DDX39A-201ENST00000242776 WDR33Q9C0J8 1336 aaKnown RBP18.42■□□□□ 0.54
DDX39A-201ENST00000242776 PNMA8AQ86V59 439 aaPredicted RBP18.41■□□□□ 0.54
DDX39A-201ENST00000242776 MIS18AQ9NYP9 233 aa18.41■□□□□ 0.54
DDX39A-201ENST00000242776 FZD9O00144 591 aa18.4■□□□□ 0.54
DDX39A-201ENST00000242776 JDP2Q8WYK2 163 aa18.4■□□□□ 0.54
DDX39A-201ENST00000242776 LTBP1Q14766 1721 aa18.4■□□□□ 0.54
DDX39A-201ENST00000242776 COL4A5P29400 1685 aa18.4■□□□□ 0.54
DDX39A-201ENST00000242776 ABCC12Q96J65 1359 aa18.4■□□□□ 0.54
DDX39A-201ENST00000242776 NUP98P52948 1817 aa18.39■□□□□ 0.54
DDX39A-201ENST00000242776 KLRG2A4D1S0 409 aaPredicted RBP18.39■□□□□ 0.54
DDX39A-201ENST00000242776 RASSF10A6NK89 507 aa18.39■□□□□ 0.54
DDX39A-201ENST00000242776 U2AF1L5P0DN76 240 aaPredicted RBP18.39■□□□□ 0.54
DDX39A-201ENST00000242776 ALDH1B1P30837 517 aa18.39■□□□□ 0.54
DDX39A-201ENST00000242776 U2AF1Q01081 240 aaKnown RBP eCLIP18.39■□□□□ 0.542e-6■□□□□ 10.7
DDX39A-201ENST00000242776 GPC2Q8N158 579 aa18.39■□□□□ 0.54
DDX39A-201ENST00000242776 ABHD8Q96I13 439 aa18.39■□□□□ 0.54
DDX39A-201ENST00000242776 EIF6P56537 245 aaKnown RBP18.39■□□□□ 0.53
DDX39A-201ENST00000242776 FAM161AQ3B820 660 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 337.7 ms