RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 LTV1Q96GA3 475 aaPredicted RBP12.06□□□□□ -0.48
MDH1-201ENST00000233114 NBPF4Q96M43 638 aa12.06□□□□□ -0.48
MDH1-201ENST00000233114 EXOC6BQ9Y2D4 811 aa12.06□□□□□ -0.48
MDH1-201ENST00000233114 LRRFIP2Q9Y608 721 aaKnown RBP12.06□□□□□ -0.48
MDH1-201ENST00000233114 SIPA1L3O60292 1781 aaPredicted RBP12.06□□□□□ -0.48
MDH1-201ENST00000233114 CRYBG1Q9Y4K1 1723 aa12.05□□□□□ -0.48
MDH1-201ENST00000233114 RGPD2P0DJD1 1756 aa12.05□□□□□ -0.48
MDH1-201ENST00000233114 XRCC6P12956 609 aaKnown RBP eCLIP12.05□□□□□ -0.48
MDH1-201ENST00000233114 TEFQ10587 303 aa12.05□□□□□ -0.48
MDH1-201ENST00000233114 ZNF530Q6P9A1 599 aaPredicted RBP12.05□□□□□ -0.48
MDH1-201ENST00000233114 ARHGEF25Q86VW2 580 aa12.05□□□□□ -0.48
MDH1-201ENST00000233114 DNAAF4Q8WXU2 420 aa12.05□□□□□ -0.48
MDH1-201ENST00000233114 HEG1Q9ULI3 1381 aa12.05□□□□□ -0.48
MDH1-201ENST00000233114 ALDH1L1O75891 902 aa12.04□□□□□ -0.48
MDH1-201ENST00000233114 BAG4O95429 457 aaKnown RBP12.04□□□□□ -0.48
MDH1-201ENST00000233114 CHMLP26374 656 aa12.04□□□□□ -0.48
MDH1-201ENST00000233114 SSFA2P28290 1259 aa12.04□□□□□ -0.48
MDH1-201ENST00000233114 MTX1Q13505 466 aa12.04□□□□□ -0.48
MDH1-201ENST00000233114 KLHL40Q2TBA0 621 aa12.04□□□□□ -0.48
MDH1-201ENST00000233114 ESCO1Q5FWF5 840 aa12.04□□□□□ -0.48
MDH1-201ENST00000233114 L3MBTL3Q96JM7 780 aaPredicted RBP12.04□□□□□ -0.48
MDH1-201ENST00000233114 USP42Q9H9J4 1324 aaKnown RBP12.04□□□□□ -0.48
MDH1-201ENST00000233114 CHRM1P11229 460 aaPredicted RBP12.03□□□□□ -0.48
MDH1-201ENST00000233114 C1orf141Q5JVX7 400 aa12.03□□□□□ -0.48
MDH1-201ENST00000233114 BEND3Q5T5X7 828 aa12.03□□□□□ -0.48
MDH1-201ENST00000233114 USHBP1Q8N6Y0 703 aa12.03□□□□□ -0.48
MDH1-201ENST00000233114 KIF1BPQ96EK5 621 aa12.03□□□□□ -0.48
MDH1-201ENST00000233114 GRPEL1Q9HAV7 217 aa12.03□□□□□ -0.48
MDH1-201ENST00000233114 DBF4Q9UBU7 674 aaPredicted RBP12.03□□□□□ -0.48
MDH1-201ENST00000233114 AK9Q5TCS8 1911 aa12.03□□□□□ -0.48
MDH1-201ENST00000233114 RNMTO43148 476 aaKnown RBP12.03□□□□□ -0.48
MDH1-201ENST00000233114 GCP02774 474 aa12.03□□□□□ -0.48
MDH1-201ENST00000233114 INTS4Q96HW7 963 aaKnown RBP12.03□□□□□ -0.48
MDH1-201ENST00000233114 GZF1Q9H116 711 aaPredicted RBP12.03□□□□□ -0.48
MDH1-201ENST00000233114 BTBD11A6QL63 1104 aa12.02□□□□□ -0.49
MDH1-201ENST00000233114 PSEN1P49768 467 aa12.02□□□□□ -0.49
MDH1-201ENST00000233114 CUL4AQ13619 759 aa12.02□□□□□ -0.49
MDH1-201ENST00000233114 PPP1R42Q7Z4L9 355 aa12.02□□□□□ -0.49
MDH1-201ENST00000233114 NECTIN2Q92692 538 aa12.02□□□□□ -0.49
MDH1-201ENST00000233114 PHAXQ9H814 394 aaKnown RBP12.02□□□□□ -0.49
MDH1-201ENST00000233114 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.02□□□□□ -0.496e-10■■□□□ 12.5
MDH1-201ENST00000233114 ADCY9O60503 1353 aa12.01□□□□□ -0.49
MDH1-201ENST00000233114 TTC41PQ6P2S7 1318 aa12.01□□□□□ -0.49
MDH1-201ENST00000233114 SPNS2Q8IVW8 549 aa12.01□□□□□ -0.49
MDH1-201ENST00000233114 RHPN1Q8TCX5 695 aa12.01□□□□□ -0.49
MDH1-201ENST00000233114 LGR6Q9HBX8 967 aa12.01□□□□□ -0.49
MDH1-201ENST00000233114 CHPF2Q9P2E5 772 aa12.01□□□□□ -0.49
MDH1-201ENST00000233114 ALS2Q96Q42 1657 aa12.01□□□□□ -0.49
MDH1-201ENST00000233114 PXDNQ92626 1479 aa12.01□□□□□ -0.49
MDH1-201ENST00000233114 MMRN1Q13201 1228 aa12□□□□□ -0.49
MDH1-201ENST00000233114 ERC1Q8IUD2 1116 aa12□□□□□ -0.49
MDH1-201ENST00000233114 DCCP43146 1447 aa12□□□□□ -0.49
MDH1-201ENST00000233114 PI4KAP2A4QPH2 592 aa12□□□□□ -0.49
MDH1-201ENST00000233114 TRIM6-TRIM34B2RNG4 842 aa12□□□□□ -0.49
MDH1-201ENST00000233114 SURF6O75683 361 aaKnown RBP12□□□□□ -0.49
MDH1-201ENST00000233114 PI4KAP1Q8N8J0 262 aa12□□□□□ -0.49
MDH1-201ENST00000233114 ANKRD24Q8TF21 1146 aa12□□□□□ -0.49
MDH1-201ENST00000233114 HYPKQ9NX55 129 aa12□□□□□ -0.49
MDH1-201ENST00000233114 C1orf167Q5SNV9 1468 aa12□□□□□ -0.49
MDH1-201ENST00000233114 SRGAP3O43295 1099 aa11.99□□□□□ -0.49
MDH1-201ENST00000233114 EIF2S2P20042 333 aaKnown RBP11.99□□□□□ -0.49
MDH1-201ENST00000233114 NEK4P51957 841 aa11.99□□□□□ -0.49
MDH1-201ENST00000233114 ZNF445P59923 1031 aa11.99□□□□□ -0.49
MDH1-201ENST00000233114 KSR2Q6VAB6 950 aa11.99□□□□□ -0.49
MDH1-201ENST00000233114 CNTROBQ8N137 903 aa11.99□□□□□ -0.49
MDH1-201ENST00000233114 PI4K2BQ8TCG2 481 aa11.99□□□□□ -0.49
MDH1-201ENST00000233114 RILPL2Q969X0 211 aa11.99□□□□□ -0.49
MDH1-201ENST00000233114 TMX3Q96JJ7 454 aa11.99□□□□□ -0.49
MDH1-201ENST00000233114 ANO2Q9NQ90 1003 aa11.99□□□□□ -0.49
MDH1-201ENST00000233114 UTYO14607 1347 aa11.98□□□□□ -0.49
MDH1-201ENST00000233114 GIGYF1O75420 1035 aaPredicted RBP11.98□□□□□ -0.49
MDH1-201ENST00000233114 GLRX3O76003 335 aaKnown RBP11.98□□□□□ -0.49
MDH1-201ENST00000233114 HSPA4P34932 840 aa11.98□□□□□ -0.49
MDH1-201ENST00000233114 GPATCH3Q96I76 525 aa11.98□□□□□ -0.49
MDH1-201ENST00000233114 DDX49Q9Y6V7 483 aaKnown RBP11.98□□□□□ -0.49
MDH1-201ENST00000233114 RAD50Q92878 1312 aa11.98□□□□□ -0.49
MDH1-201ENST00000233114 SCN11AQ9UI33 1791 aa11.97□□□□□ -0.49
MDH1-201ENST00000233114 DDX58O95786 925 aaKnown RBP11.97□□□□□ -0.49
MDH1-201ENST00000233114 PDIA4P13667 645 aaKnown RBP11.97□□□□□ -0.49
MDH1-201ENST00000233114 LRRC59Q96AG4 307 aaKnown RBP11.97□□□□□ -0.49
MDH1-201ENST00000233114 LMBRD1Q9NUN5 540 aa11.97□□□□□ -0.49
MDH1-201ENST00000233114 SGSM2O43147 1006 aa11.97□□□□□ -0.49
MDH1-201ENST00000233114 TSHZ3Q63HK5 1081 aa11.97□□□□□ -0.49
MDH1-201ENST00000233114 LINS1Q8NG48 757 aa11.97□□□□□ -0.49
MDH1-201ENST00000233114 RUFY2Q8WXA3 655 aa11.97□□□□□ -0.49
MDH1-201ENST00000233114 MRC1P22897 1456 aa11.96□□□□□ -0.49
MDH1-201ENST00000233114 ERBB3P21860 1342 aa11.96□□□□□ -0.49
MDH1-201ENST00000233114 KCNQ3O43525 872 aa11.96□□□□□ -0.5
MDH1-201ENST00000233114 NBPF7P0C2Y1 421 aaPredicted RBP11.96□□□□□ -0.5
MDH1-201ENST00000233114 EMP3P54852 163 aa11.96□□□□□ -0.5
MDH1-201ENST00000233114 MCTP1Q6DN14 999 aa11.96□□□□□ -0.5
MDH1-201ENST00000233114 MPRIPQ6WCQ1 1025 aa11.96□□□□□ -0.5
MDH1-201ENST00000233114 KRT28Q7Z3Y7 464 aa11.96□□□□□ -0.5
MDH1-201ENST00000233114 ZGPATQ8N5A5 531 aaKnown RBP11.96□□□□□ -0.5
MDH1-201ENST00000233114 ORAI2Q96SN7 254 aa11.96□□□□□ -0.5
MDH1-201ENST00000233114 C19orf44Q9H6X5 657 aa11.96□□□□□ -0.5
MDH1-201ENST00000233114 IL1RAPL2Q9NP60 686 aa11.96□□□□□ -0.5
MDH1-201ENST00000233114 DDX21Q9NR30 783 aaKnown RBP eCLIP11.96□□□□□ -0.54e-6■□□□□ 11.2
MDH1-201ENST00000233114 BRD1O95696 1058 aa11.95□□□□□ -0.5
MDH1-201ENST00000233114 MBD3O95983 291 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms