RNA–Protein interactions for RNA: ENST00000231524.13

TRIM23-201, Transcript of tripartite motif containing 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM23, Length 4,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-201ENST00000231524 PTPRTO14522 1441 aa11.44□□□□□ -0.58
TRIM23-201ENST00000231524 NCOA3Q9Y6Q9 1424 aa11.44□□□□□ -0.58
TRIM23-201ENST00000231524 TXLNBQ8N3L3 684 aa11.43□□□□□ -0.58
TRIM23-201ENST00000231524 POLKQ9UBT6 870 aa11.43□□□□□ -0.58
TRIM23-201ENST00000231524 NCBP1Q09161 790 aaKnown RBP11.43□□□□□ -0.58
TRIM23-201ENST00000231524 NCBP3Q53F19 620 aaKnown RBP11.43□□□□□ -0.58
TRIM23-201ENST00000231524 ADGBQ8N7X0 1667 aa11.43□□□□□ -0.58
TRIM23-201ENST00000231524 CAVIN2O95810 425 aa11.43□□□□□ -0.58
TRIM23-201ENST00000231524 NLRP6P59044 892 aa11.43□□□□□ -0.58
TRIM23-201ENST00000231524 TEFQ10587 303 aa11.43□□□□□ -0.58
TRIM23-201ENST00000231524 CCAR1Q8IX12 1150 aaKnown RBP11.43□□□□□ -0.58
TRIM23-201ENST00000231524 CCDC191Q8NCU4 936 aa11.43□□□□□ -0.58
TRIM23-201ENST00000231524 KDM5DQ9BY66 1539 aa11.43□□□□□ -0.58
TRIM23-201ENST00000231524 NPHP3Q7Z494 1330 aa11.43□□□□□ -0.58
TRIM23-201ENST00000231524 HIP1O00291 1037 aa11.42□□□□□ -0.58
TRIM23-201ENST00000231524 TPM1P09493 284 aa11.42□□□□□ -0.58
TRIM23-201ENST00000231524 FLIIQ13045 1269 aa11.42□□□□□ -0.58
TRIM23-201ENST00000231524 FSIP1Q8NA03 581 aa11.42□□□□□ -0.58
TRIM23-201ENST00000231524 PLEKHF1Q96S99 279 aa11.42□□□□□ -0.58
TRIM23-201ENST00000231524 POGZQ7Z3K3 1410 aa11.42□□□□□ -0.58
TRIM23-201ENST00000231524 POLR1AO95602 1720 aaPredicted RBP11.42□□□□□ -0.58
TRIM23-201ENST00000231524 ABCC4O15439 1325 aa11.42□□□□□ -0.58
TRIM23-201ENST00000231524 PLA2R1Q13018 1463 aa11.42□□□□□ -0.58
TRIM23-201ENST00000231524 ARHGEF5Q12774 1597 aa11.42□□□□□ -0.58
TRIM23-201ENST00000231524 CCDC34Q96HJ3 373 aa11.42□□□□□ -0.58
TRIM23-201ENST00000231524 CTAGE5O15320 804 aa11.42□□□□□ -0.58
TRIM23-201ENST00000231524 ISM2Q6H9L7 571 aa11.42□□□□□ -0.58
TRIM23-201ENST00000231524 PPP1R42Q7Z4L9 355 aa11.42□□□□□ -0.58
TRIM23-201ENST00000231524 AOPEPQ8N6M6 819 aa11.42□□□□□ -0.58
TRIM23-201ENST00000231524 YEATS2Q9ULM3 1422 aa11.42□□□□□ -0.58
TRIM23-201ENST00000231524 LIG1P18858 919 aa11.42□□□□□ -0.58
TRIM23-201ENST00000231524 CUL4AQ13619 759 aa11.42□□□□□ -0.58
TRIM23-201ENST00000231524 GPATCH11Q8N954 259 aa11.42□□□□□ -0.58
TRIM23-201ENST00000231524 CHMP4CQ96CF2 233 aa11.42□□□□□ -0.58
TRIM23-201ENST00000231524 PREX2Q70Z35 1606 aa11.41□□□□□ -0.58
TRIM23-201ENST00000231524 EIF3JO75822 258 aaKnown RBP11.41□□□□□ -0.58
TRIM23-201ENST00000231524 GTF2A1P52655 376 aaPredicted RBP11.41□□□□□ -0.58
TRIM23-201ENST00000231524 AIMP1Q12904 312 aaKnown RBP11.41□□□□□ -0.58
TRIM23-201ENST00000231524 ERCC6LQ2NKX8 1250 aa11.41□□□□□ -0.58
TRIM23-201ENST00000231524 KRBA2Q6ZNG9 492 aa11.41□□□□□ -0.58
TRIM23-201ENST00000231524 PRDM15P57071 1507 aaPredicted RBP11.41□□□□□ -0.58
TRIM23-201ENST00000231524 RHPN1Q8TCX5 695 aa11.41□□□□□ -0.58
TRIM23-201ENST00000231524 SNX14Q9Y5W7 946 aa11.41□□□□□ -0.58
TRIM23-201ENST00000231524 MSH6P52701 1360 aa11.41□□□□□ -0.58
TRIM23-201ENST00000231524 H0YHG0 523 aa11.41□□□□□ -0.58
TRIM23-201ENST00000231524 DHX8Q14562 1220 aaKnown RBP11.41□□□□□ -0.58
TRIM23-201ENST00000231524 CERS3Q8IU89 383 aa11.41□□□□□ -0.58
TRIM23-201ENST00000231524 NUDT16Q96DE0 195 aaKnown RBP11.41□□□□□ -0.58
TRIM23-201ENST00000231524 RASSF4Q9H2L5 321 aa11.41□□□□□ -0.58
TRIM23-201ENST00000231524 BOLA2Q9H3K6 86 aa11.41□□□□□ -0.58
TRIM23-201ENST00000231524 SPTLC3Q9NUV7 552 aa11.41□□□□□ -0.58
TRIM23-201ENST00000231524 ERLIN1O75477 346 aa11.4□□□□□ -0.58
TRIM23-201ENST00000231524 TERF2Q15554 542 aa11.4□□□□□ -0.58
TRIM23-201ENST00000231524 GNG11P61952 73 aa11.4□□□□□ -0.58
TRIM23-201ENST00000231524 ATP8B2P98198 1209 aa11.4□□□□□ -0.58
TRIM23-201ENST00000231524 ESCO1Q5FWF5 840 aa11.4□□□□□ -0.58
TRIM23-201ENST00000231524 G2E3Q7L622 706 aa11.4□□□□□ -0.58
TRIM23-201ENST00000231524 ARFGAP3Q9NP61 516 aa11.4□□□□□ -0.58
TRIM23-201ENST00000231524 TOMM22Q9NS69 142 aa11.4□□□□□ -0.58
TRIM23-201ENST00000231524 CASQ1P31415 396 aa11.4□□□□□ -0.58
TRIM23-201ENST00000231524 MCM6Q14566 821 aa11.4□□□□□ -0.58
TRIM23-201ENST00000231524 ZSCAN12O43309 604 aa11.39□□□□□ -0.59
TRIM23-201ENST00000231524 BRPF1P55201 1214 aaPredicted RBP11.39□□□□□ -0.59
TRIM23-201ENST00000231524 AXDND1Q5T1B0 1012 aaPredicted RBP11.39□□□□□ -0.59
TRIM23-201ENST00000231524 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.39□□□□□ -0.59
TRIM23-201ENST00000231524 CACTINQ8WUQ7 758 aaKnown RBP11.39□□□□□ -0.59
TRIM23-201ENST00000231524 A0A1W2PP64 1363 aa11.39□□□□□ -0.59
TRIM23-201ENST00000231524 ANKLE2Q86XL3 938 aa11.39□□□□□ -0.59
TRIM23-201ENST00000231524 NEK11Q8NG66 645 aa11.39□□□□□ -0.59
TRIM23-201ENST00000231524 NOC3LQ8WTT2 800 aaKnown RBP11.39□□□□□ -0.59
TRIM23-201ENST00000231524 DDX41Q9UJV9 622 aaKnown RBP11.39□□□□□ -0.59
TRIM23-201ENST00000231524 PROSER2Q86WR7 435 aaPredicted RBP11.39□□□□□ -0.59
TRIM23-201ENST00000231524 STK11IPQ8N1F8 1099 aa11.39□□□□□ -0.59
TRIM23-201ENST00000231524 CTNNA3Q9UI47 895 aa11.39□□□□□ -0.59
TRIM23-201ENST00000231524 MAST1Q9Y2H9 1570 aa11.39□□□□□ -0.59
TRIM23-201ENST00000231524 CBFA2T2O43439 604 aa11.38□□□□□ -0.59
TRIM23-201ENST00000231524 TOP1P11387 765 aaKnown RBP11.38□□□□□ -0.59
TRIM23-201ENST00000231524 HSPA4P34932 840 aa11.38□□□□□ -0.59
TRIM23-201ENST00000231524 CCDC8Q9H0W5 538 aaPredicted RBP11.38□□□□□ -0.59
TRIM23-201ENST00000231524 RBM8AQ9Y5S9 174 aaKnown RBP11.38□□□□□ -0.59
TRIM23-201ENST00000231524 ABCC1P33527 1531 aa11.38□□□□□ -0.59
TRIM23-201ENST00000231524 ERC1Q8IUD2 1116 aa11.38□□□□□ -0.59
TRIM23-201ENST00000231524 ABTB2Q8N961 1025 aa11.38□□□□□ -0.59
TRIM23-201ENST00000231524 ERCC4Q92889 916 aaPredicted RBP11.38□□□□□ -0.59
TRIM23-201ENST00000231524 NEUROD6Q96NK8 337 aa11.38□□□□□ -0.59
TRIM23-201ENST00000231524 ZRANB1Q9UGI0 708 aa11.38□□□□□ -0.59
TRIM23-201ENST00000231524 CCT2P78371 535 aaKnown RBP11.38□□□□□ -0.59
TRIM23-201ENST00000231524 TAF7Q15545 349 aaPredicted RBP11.38□□□□□ -0.59
TRIM23-201ENST00000231524 TSR1Q2NL82 804 aaKnown RBP11.38□□□□□ -0.59
TRIM23-201ENST00000231524 JAKMIP3Q5VZ66 844 aa11.38□□□□□ -0.59
TRIM23-201ENST00000231524 CPLX2Q6PUV4 134 aaKnown RBP11.38□□□□□ -0.59
TRIM23-201ENST00000231524 TTC6Q86TZ1 520 aa11.38□□□□□ -0.59
TRIM23-201ENST00000231524 CCDC150Q8NCX0 1101 aa11.38□□□□□ -0.59
TRIM23-201ENST00000231524 IPO4Q8TEX9 1081 aaKnown RBP11.38□□□□□ -0.59
TRIM23-201ENST00000231524 BRF1Q92994 677 aa11.38□□□□□ -0.59
TRIM23-201ENST00000231524 RSPH14Q9UHP6 348 aa11.38□□□□□ -0.59
TRIM23-201ENST00000231524 MTMR6Q9Y217 621 aa11.38□□□□□ -0.59
TRIM23-201ENST00000231524 AMOTL2Q9Y2J4 779 aa11.38□□□□□ -0.59
TRIM23-201ENST00000231524 CCDC61Q9Y6R9 512 aa11.38□□□□□ -0.59
TRIM23-201ENST00000231524 ERVK-7P63135 1459 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms