RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 MYD88Q99836 296 aa20.92■□□□□ 0.94
TVP23C-201ENST00000225576 PNMA6EA0A0J9YXQ4 647 aa20.91■□□□□ 0.94
TVP23C-201ENST00000225576 C8orf34Q49A92 452 aa20.91■□□□□ 0.94
TVP23C-201ENST00000225576 SSH3Q8TE77 659 aa20.91■□□□□ 0.94
TVP23C-201ENST00000225576 TRPC5Q9UL62 973 aaPredicted RBP20.9■□□□□ 0.94
TVP23C-201ENST00000225576 ATRNO75882 1429 aa20.9■□□□□ 0.94
TVP23C-201ENST00000225576 ONECUT3O60422 494 aaPredicted RBP20.89■□□□□ 0.94
TVP23C-201ENST00000225576 CYP19A1P11511 503 aaPredicted RBP20.89■□□□□ 0.94
TVP23C-201ENST00000225576 MTX1Q13505 466 aa20.89■□□□□ 0.94
TVP23C-201ENST00000225576 POLA2Q14181 598 aa20.89■□□□□ 0.94
TVP23C-201ENST00000225576 GCKRQ14397 625 aa20.89■□□□□ 0.94
TVP23C-201ENST00000225576 TTLL7Q6ZT98 887 aa20.89■□□□□ 0.94
TVP23C-201ENST00000225576 SMARCC1Q92922 1105 aaPredicted RBP20.89■□□□□ 0.94
TVP23C-201ENST00000225576 ZBTB47Q9UFB7 747 aaPredicted RBP20.89■□□□□ 0.94
TVP23C-201ENST00000225576 THSD7AQ9UPZ6 1657 aa20.89■□□□□ 0.94
TVP23C-201ENST00000225576 A0A0G2JS52 829 aa20.88■□□□□ 0.93
TVP23C-201ENST00000225576 MYT1Q01538 1121 aa20.88■□□□□ 0.93
TVP23C-201ENST00000225576 PPP1R42Q7Z4L9 355 aa20.88■□□□□ 0.93
TVP23C-201ENST00000225576 SRGAP3O43295 1099 aa20.85■□□□□ 0.93
TVP23C-201ENST00000225576 KCNQ2O43526 872 aa20.85■□□□□ 0.93
TVP23C-201ENST00000225576 LOC102724428A0A0B4J2F2 783 aa20.84■□□□□ 0.93
TVP23C-201ENST00000225576 SIK1P57059 783 aa20.84■□□□□ 0.93
TVP23C-201ENST00000225576 SUCLG2Q96I99 432 aa20.84■□□□□ 0.93
TVP23C-201ENST00000225576 ARFGEF2Q9Y6D5 1785 aa20.84■□□□□ 0.93
TVP23C-201ENST00000225576 COL15A1P39059 1388 aa20.84■□□□□ 0.93
TVP23C-201ENST00000225576 PALLDQ8WX93 1383 aa20.84■□□□□ 0.93
TVP23C-201ENST00000225576 KAZALD1Q96I82 304 aa20.83■□□□□ 0.93
TVP23C-201ENST00000225576 EXOC6BQ9Y2D4 811 aa20.83■□□□□ 0.93
TVP23C-201ENST00000225576 ATP5J2-PTCD1G3V325 749 aa20.83■□□□□ 0.92
TVP23C-201ENST00000225576 RAB11FIP3O75154 756 aa20.83■□□□□ 0.92
TVP23C-201ENST00000225576 ATP6V1AP38606 617 aa20.83■□□□□ 0.92
TVP23C-201ENST00000225576 KIF6Q6ZMV9 814 aa20.83■□□□□ 0.92
TVP23C-201ENST00000225576 ZBTB3Q9H5J0 574 aa20.83■□□□□ 0.92
TVP23C-201ENST00000225576 QTRT2Q9H974 415 aaKnown RBP20.83■□□□□ 0.92
TVP23C-201ENST00000225576 KAT6BQ8WYB5 2073 aa20.82■□□□□ 0.92
TVP23C-201ENST00000225576 TJP1Q07157 1748 aa20.82■□□□□ 0.92
TVP23C-201ENST00000225576 IL6STP40189 918 aaPredicted RBP20.82■□□□□ 0.92
TVP23C-201ENST00000225576 POTEAQ6S8J7 498 aa20.82■□□□□ 0.92
TVP23C-201ENST00000225576 PLEKHM2Q8IWE5 1019 aa20.82■□□□□ 0.92
TVP23C-201ENST00000225576 CCDC191Q8NCU4 936 aa20.82■□□□□ 0.92
TVP23C-201ENST00000225576 LRRCC1Q9C099 1032 aa20.82■□□□□ 0.92
TVP23C-201ENST00000225576 ZBTB1Q9Y2K1 713 aa20.82■□□□□ 0.92
TVP23C-201ENST00000225576 TRIM28Q13263 835 aaKnown RBP20.81■□□□□ 0.92
TVP23C-201ENST00000225576 TCIRG1Q13488 830 aa20.81■□□□□ 0.92
TVP23C-201ENST00000225576 HSP90AB4PQ58FF6 505 aa20.81■□□□□ 0.92
TVP23C-201ENST00000225576 BMP2KLQ5H9B9 411 aa20.81■□□□□ 0.92
TVP23C-201ENST00000225576 CWC25Q9NXE8 425 aaPredicted RBP20.81■□□□□ 0.92
TVP23C-201ENST00000225576 NOP58Q9Y2X3 529 aaKnown RBP20.81■□□□□ 0.92
TVP23C-201ENST00000225576 CICQ96RK0 1608 aaPredicted RBP20.81■□□□□ 0.92
TVP23C-201ENST00000225576 NUP188Q5SRE5 1749 aa20.81■□□□□ 0.92
TVP23C-201ENST00000225576 MAP3K15Q6ZN16 1313 aa20.8■□□□□ 0.92
TVP23C-201ENST00000225576 A0A087WZG4 1122 aa20.8■□□□□ 0.92
TVP23C-201ENST00000225576 H7C1W4 665 aa20.8■□□□□ 0.92
TVP23C-201ENST00000225576 APBB1O00213 710 aa20.8■□□□□ 0.92
TVP23C-201ENST00000225576 ISCA1Q9BUE6 129 aa20.8■□□□□ 0.92
TVP23C-201ENST00000225576 BICC1Q9H694 974 aaKnown RBP20.8■□□□□ 0.92
TVP23C-201ENST00000225576 SMARCA5O60264 1052 aaPredicted RBP20.79■□□□□ 0.92
TVP23C-201ENST00000225576 SURF6O75683 361 aaKnown RBP20.79■□□□□ 0.92
TVP23C-201ENST00000225576 CASP7P55210 303 aa20.79■□□□□ 0.92
TVP23C-201ENST00000225576 SEPT12Q8IYM1 358 aa20.79■□□□□ 0.92
TVP23C-201ENST00000225576 CCDC87Q9NVE4 849 aa20.79■□□□□ 0.92
TVP23C-201ENST00000225576 ZNF330Q9Y3S2 320 aaPredicted RBP20.79■□□□□ 0.92
TVP23C-201ENST00000225576 ITPK1Q13572 414 aa20.78■□□□□ 0.92
TVP23C-201ENST00000225576 INTS5Q6P9B9 1019 aaKnown RBP20.78■□□□□ 0.92
TVP23C-201ENST00000225576 UBE3BQ7Z3V4 1068 aa20.78■□□□□ 0.92
TVP23C-201ENST00000225576 C16orf71Q8IYS4 520 aaPredicted RBP20.78■□□□□ 0.92
TVP23C-201ENST00000225576 ERVV-1B6SEH8 477 aa20.78■□□□□ 0.92
TVP23C-201ENST00000225576 GIGYF2Q6Y7W6 1299 aaKnown RBP20.78■□□□□ 0.92
TVP23C-201ENST00000225576 NPM2Q86SE8 214 aaKnown RBP20.78■□□□□ 0.92
TVP23C-201ENST00000225576 CRKLP46109 303 aaKnown RBP20.77■□□□□ 0.92
TVP23C-201ENST00000225576 EIF5P55010 431 aaKnown RBP20.77■□□□□ 0.92
TVP23C-201ENST00000225576 RABL6Q3YEC7 729 aaPredicted RBP20.77■□□□□ 0.92
TVP23C-201ENST00000225576 HSP90AB3PQ58FF7 597 aa20.77■□□□□ 0.92
TVP23C-201ENST00000225576 ZNF772Q68DY9 489 aaPredicted RBP20.77■□□□□ 0.92
TVP23C-201ENST00000225576 ZNF831Q5JPB2 1677 aa20.76■□□□□ 0.91
TVP23C-201ENST00000225576 KIF1BPQ96EK5 621 aa20.76■□□□□ 0.91
TVP23C-201ENST00000225576 OSBPL3Q9H4L5 887 aa20.76■□□□□ 0.91
TVP23C-201ENST00000225576 EPHA10Q5JZY3 1008 aa20.75■□□□□ 0.91
TVP23C-201ENST00000225576 RHPN1Q8TCX5 695 aa20.75■□□□□ 0.91
TVP23C-201ENST00000225576 OTUD7AQ8TE49 926 aaPredicted RBP20.74■□□□□ 0.91
TVP23C-201ENST00000225576 AFDNP55196 1824 aaKnown RBP20.74■□□□□ 0.91
TVP23C-201ENST00000225576 TTC22Q5TAA0 569 aa20.73■□□□□ 0.91
TVP23C-201ENST00000225576 DZIP3Q86Y13 1208 aaKnown RBP20.73■□□□□ 0.91
TVP23C-201ENST00000225576 ERC1Q8IUD2 1116 aa20.73■□□□□ 0.91
TVP23C-201ENST00000225576 ARXQ96QS3 562 aa20.73■□□□□ 0.91
TVP23C-201ENST00000225576 SALL3Q9BXA9 1300 aa20.73■□□□□ 0.91
TVP23C-201ENST00000225576 NHSQ6T4R5 1651 aa20.73■□□□□ 0.91
TVP23C-201ENST00000225576 RREB1Q92766 1687 aa20.73■□□□□ 0.91
TVP23C-201ENST00000225576 PDE1AP54750 535 aa20.73■□□□□ 0.91
TVP23C-201ENST00000225576 HLFQ16534 295 aa20.73■□□□□ 0.91
TVP23C-201ENST00000225576 PTF1AQ7RTS3 328 aa20.73■□□□□ 0.91
TVP23C-201ENST00000225576 JARID2Q92833 1246 aaPredicted RBP20.73■□□□□ 0.91
TVP23C-201ENST00000225576 ANP32AP39687 249 aaKnown RBP20.72■□□□□ 0.91
TVP23C-201ENST00000225576 FAM182BQ5T319 152 aa20.72■□□□□ 0.91
TVP23C-201ENST00000225576 PCCAP05165 728 aaPredicted RBP20.71■□□□□ 0.91
TVP23C-201ENST00000225576 GSPT1P15170 499 aaKnown RBP20.71■□□□□ 0.91
TVP23C-201ENST00000225576 FOXO4P98177 505 aa20.71■□□□□ 0.91
TVP23C-201ENST00000225576 STAP2Q9UGK3 403 aa20.71■□□□□ 0.91
TVP23C-201ENST00000225576 OS9Q13438 667 aaPredicted RBP20.7■□□□□ 0.9
TVP23C-201ENST00000225576 ZBTB38Q8NAP3 1195 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms